KEGG   Daphnia pulicaria: 124337569
Entry
124337569         CDS       T08670                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
dpz  Daphnia pulicaria
Pathway
dpz03030  DNA replication
dpz03410  Base excision repair
dpz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dpz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    124337569
   03410 Base excision repair
    124337569
   03420 Nucleotide excision repair
    124337569
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dpz03032]
    124337569
   03400 DNA repair and recombination proteins [BR:dpz03400]
    124337569
Enzymes [BR:dpz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     124337569
DNA replication proteins [BR:dpz03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    124337569
DNA repair and recombination proteins [BR:dpz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      124337569
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2 APP_N
Other DBs
NCBI-GeneID: 124337569
NCBI-ProteinID: XP_046647554
LinkDB
Position
4:3839912..3848372
AA seq 2241 aa
MVYQNTGKYRADKSSKEKSAGGKEDLAESRITRVNENKAIDEKYGFFTPKESGEKIGYLV
NMHTTEIFDAAQQLISAVDYYFVQEDGSRFKASLPFKPYFYILPKKECIQEVSSFLGKKY
AGIIASIEQCSKEDLDLSNHLVGLKQTYLKLSFLSVTDLMKVRKEIMPHARKNSSQTNSA
YSEMMAKFQNEAAQEESDKKVGDTMDNIIDIREYDVPYHIRVSIDMNICVGLWYAIKFKG
SETISITRREDIIDTPDTIVLAFDIETTKLPLKFPDPATDQIFMISYMIDGQGYLITNRE
IVAADVEDFEYTPKPEFEGPFIIFNEPNEVSLIQRFLDHVIEVKPHIIVTYNGDFFDWSF
VEARATFHDMNVAKMTGWERDKEGVYSCRPSIHMDCFNWVKRDSYLPVGSQNLKAVAKAK
LRYDPVELDPEDMCRMAAEQPQVMANYSVSDAVATYYLYMKYVHPFIFALCTIIPMEPDE
VLRKGSGTLCESLLMVEAFRANIIFPNKQVSLLQNWTDDGHLLDTETYVGGHVEALESGV
FRSDIPCRFRLIPQAFDSLIEGIERTIKHAVEEEEHVPIEEVTNLDEVIDDIKEKLCSLR
DAPNRIELPVIYHLDVGAMYPNIILTNRLQPSAMVDESVCASCDFNQPEAQCQRNMSWMW
RGDFMPATRGEFQRIQQQLENEKFPPVIPGMPTRAFHQLPREEQSAKEKQRLSEYCRKAY
KKVRVTRTEERQQTVCQKENSFYVDTVRAFRDRRYEYKNLNKTAKKQIAEAIALGDAGEI
KSAKNREVLYDSLQLAHKCILNSFYGYVMRKGARWHSMEMAGIVCHTGAGIIRKARELIE
QVGRPLELDTDGIWCMLPSSFPENYVIKTSSLKKPKITISYPGAVLNVMVKDAFTNNQYH
ELVDPETLSYVQRDENSIFFEVDGPYLAMILPASKEEGKKLKKRYAVFNFDGSLAELKGF
EVKRRGELQLIKIFQSSVFEAFLKGDTLETCYQAVAKIADYWLDVLYSKAENLPDSELFE
LITENRSMSRKLEEYGGQKSTSISTAKRLAEFLGDQMVKDAGLSCRFIISKKPEGAPVTD
RAIPLAIFQSEPSVKRHYLKKWLKDNSMTDFDIRTILDWNYYIERLGGCIQKIITIPAAL
QGVANPVPRVQHPDWLHKRMLEKNDVLKQRRINEIFKVSIKPVGGDSNSQDLGEVGDIED
LGGSKNTENNRPTVTSKRKRGTSESANELDKNWREILGPPPPMGKPGEEREIWIRYHKKK
WAIQLKQRAARRGREQNSNTGSASVSTFGGNSGAGVLRTNLGGFLRRAQQTLLSSMWQIL
QVMETSQPGMFRLWALVGNELHQIRLTVPRIFYLNKKKPLEKEASSESAVWRKVNRILPR
SHRVYNLYEYSVPEEVYQQNFNQLMADLSTSDNAGIYETQVPLDFRVLVQLGCVCAVDRS
QRYTPTGDTESFSLSQLSFKTLAHHPYLESGIETLKYLYIYHYKSGNKVMLVLFSPPAKK
VNFFVVDTVRTNQMPNLVNLYNEERLKKLSQADVVESSVPARDYSFSIQVETDIRQVYRQ
MNRLLQTYKDEKRGPTFVAIQSPQDLHATASQIQTLNEFPLVPIHSTDPDGLYNVLDWQR
VGSKVCLRHFLRLRTVLDANLEQCRYFHIPIGNLPSDANLFGADLFFARHLIRNNCILWC
SPTERPDLGGKEADDNRLVTEIEDATTTLVVNNPGVYTNVCVEMDVDALAVTTLLQSHQV
LDVEGTSSSTAFDVPQVSLKDMLNDNHTAELSSYSESAMCVTVFRVLKSVVASWLRDISV
HRNVFADFQVIHFYRWLRSPTALLYDPALRRMLQNLMRKYFVQLLAEFQRLGATVVYADF
GRIVLGTKKRRIPDALSYVSFVCASLHQKELFRSLELNVQHCWQLLVWLDPANYGGVKGK
SDSEKENEENNEDRSFVEDEEEESTAVEMNWDVVKYFPEEPPCQEYFNTVIATYISAIHD
HLAETYGDRIPGATPVRRIRSSQTQRSKVGPTPDSLKEFTRELVDQEIAQHLFRVVQKLH
KQLQGHHGTENGLSNPSLEFVKAVCRVFQLDVNIVDEVTRLRRNLLKLIGVGEFSQEADW
KDSCLSYVLPEVICPTCNHCRDIDLCRDPHESEDRGIPTWQCPLCKSSYDSSEIESMLLD
VVNRKTMSFVLQDLQCKKCKQIKRENLSQFCSCAGEFQLLQSSTGLLQTLSIFERVSKKF
GLTLLHETVEQLLKMNQKSIK
NT seq 6726 nt   +upstreamnt  +downstreamnt
atggtgtaccaaaatactggaaagtatagggcagataagagcagcaaagagaaaagtgca
ggtgggaaagaagatttggctgaatctcgcataacaagagtaaatgaaaacaaagctatt
gacgagaaatatggatttttcacacctaaagaatcaggggaaaaaattggataccttgtc
aacatgcacacaactgagatatttgatgctgctcaacagctaatcagtgccgttgattac
tattttgtgcaagaggatggttcacgtttcaaagcctcacttcctttcaaaccttacttt
tacattttgccaaagaaagaatgcattcaagaagtttctagctttcttggtaaaaaatat
gctggaatcattgctagtatagagcagtgctctaaggaggacttggatttgtcaaaccac
ttggttggtttgaagcagacctatttgaaactgtcatttttgtctgtgacggatctgatg
aaagtgagaaaagaaataatgcctcacgcccggaaaaacagctctcaaactaattcagct
tattcggaaatgatggcaaagtttcaaaacgaagcagcgcaagaagaatcagacaagaaa
gtgggagatacaatggataacatcatagacattcgagaatatgatgttccgtaccatatc
cgcgtttcaattgacatgaacatttgtgttgggttgtggtacgcaattaaatttaaagga
tccgaaacaatttcaatcactcgccgtgaagatatcatcgatacccctgacacaattgta
ctagcttttgatatcgaaaccacaaaattacccttgaagtttcctgatcccgcaactgat
caaatttttatgatttcttacatgatagatggacagggttacttgataactaaccgagag
attgttgcagccgacgttgaagattttgagtacacacctaaacctgaatttgaaggaccc
tttatcattttcaatgagccaaatgaagtttccctcattcagcgattcctggaccatgtc
atcgaagtaaagcctcacatcatcgtcacttacaacggcgacttcttcgattggtccttt
gttgaagctcgtgccactttccatgacatgaatgtagctaaaatgactggctgggagcgt
gacaaggaaggtgtttacagttgccgcccttcgattcatatggattgcttcaattgggtt
aaacgtgattcctacttacccgttggttcacaaaacttgaaagccgtagcaaaggccaag
ttgcgctacgatccagtggaattggatccagaagatatgtgccgcatggcagcagaacag
cctcaagttatggccaattattcggtttctgatgctgttgccacgtattatctttacatg
aaatacgttcatcccttcatctttgctttgtgtaccatcattccaatggagccggacgaa
gtgttgcgaaagggatcgggcacattgtgtgaatcacttttgatggtagaagcctttcgt
gccaacatcattttcccgaacaaacaagtttctttgcttcaaaactggactgatgacggc
catcttctcgacacagaaacctatgtcggtggccatgtcgaagctctagagtcaggtgtt
ttccgctcagacatcccttgtcgattccgattaatccctcaagcctttgattcccttatt
gaaggaattgagcgtaccattaagcatgcagtcgaagaggaagaacacgttcctattgag
gaggtcaccaatctggatgaagttatagacgacataaaagaaaaactttgcagtcttcga
gatgcaccaaaccgaatcgagttacctgtaatttatcacttggatgtcggcgctatgtat
cccaatatcatcttgacaaatcgtctccaaccttcggcaatggtagacgaaagcgtctgt
gcatcctgtgatttcaatcagcctgaagcccagtgtcaacgtaacatgtcatggatgtgg
cgtggtgatttcatgccagctactcggggtgagtttcaacgaatccagcagcagttggaa
aatgaaaagtttccacctgtcatccctggtatgcctacacgagctttccatcagcttccc
cgcgaagagcagtcggccaaagagaagcagcgtttgtccgaatactgccgcaaagcatac
aagaaagttcgtgtaacgcgcactgaagagagacaacaaacagtttgtcaaaaggaaaac
agcttttatgttgacaccgttcgagccttccgtgatcgacgatatgaatataaaaatctg
aataagactgccaagaagcaaatcgccgaagcaattgcgcttggggatgccggagaaatt
aaatcggctaaaaatcgtgaagtgctttacgattccctacagcttgctcacaagtgtatt
ttgaactccttctacggttacgtcatgcgaaaaggcgcccgttggcacagtatggagatg
gctggaattgtgtgtcacactggcgctggcattatccggaaagctcgagagctaatcgaa
caagttggtcgaccgcttgaactggacacagatggtatttggtgtatgttaccgtcatct
tttccggaaaactacgtgatcaagacctcaagtctcaagaaacccaagattacgatatcc
tatccaggagctgtattgaatgtgatggtgaaagatgcctttacaaacaaccagtatcac
gagttggtggacccagaaactttgagctacgtccagcgtgacgaaaactcgatttttttc
gaagttgacggtccgtatctagcgatgattttacctgcgtcgaaagaagaaggcaaaaag
ttaaagaaacgatacgccgttttcaactttgacggcagtcttgccgaattaaaaggattc
gaagtgaaacgtcgtggagaacttcagctcatcaagattttccaatcgtctgtgtttgaa
gcgtttctcaaaggtgatactctggaaacatgctaccaggctgtggctaaaattgcagat
tactggcttgatgtgttatattcaaaagccgaaaacctccctgattccgagctatttgag
ctgattaccgagaatcgatcaatgtcacgtaaattagaagaatatggtggtcaaaaatca
acatccatcagcacagctaaacgtttggcagaatttttgggtgatcagatggtaaaagat
gctgggttaagttgtcgcttcatcatttcaaagaaaccagaaggtgcccctgttacggac
agagctattccgttggcaatttttcaatctgagcccagtgttaaacgccattatttgaaa
aaatggttaaaagacaattccatgacggattttgacattcgcacaattttagattggaat
tattacatcgaacgtcttggaggttgtatccaaaaaatcattactattcctgccgccttg
caaggcgtggctaaccctgtaccaagggtccaacatccggattggcttcacaagcgaatg
ctagaaaaaaatgacgttttaaagcagcgacggatcaatgaaatttttaaggtgtccatc
aagccagttggtggcgattccaactcacaagatttgggagaagtgggtgacatagaagat
ttgggtggaagcaaaaataccgaaaacaatcgaccaactgtgacttcgaaaaggaaacga
ggcaccagcgagtcagctaatgaattggataagaattggcgagaaatcctcggtcctcca
ccaccgatgggtaaacctggagaagagcgtgaaatttggattcgctatcacaaaaagaag
tgggctattcagttgaaacagcgagcagcccgtcgaggtagagaacaaaacagcaacact
ggatcagcttccgtctcaacttttggaggaaattctggagctggagttttaagaaccaat
ttgggtggattcttgcgacgtgcgcaacaaacccttttgtcatccatgtggcaaattttg
caggtgatggaaacatcacagccgggcatgtttcgattgtgggcgttggttggaaacgaa
cttcatcaaattcggttaactgtgccgcgtattttttatttgaataagaagaaacctttg
gaaaaagaagctagtagtgagtcagctgtctggcgaaaagttaatcggatacttcctcgc
tctcaccgtgtctataatctgtacgaatacagcgttcccgaagaagtttaccagcaaaat
ttcaatcagttaatggctgatctgtccacttcagacaacgctggaatttatgaaacccag
gtgccacttgattttcgtgtgctagtccagctcggatgtgtttgtgccgtcgatcggagt
cagcgttacacacccaccggagataccgaaagtttcagcctgtcgcagttgtcgttcaaa
acgttggcgcaccatccgtatttagaatcgggaattgaaacactcaagtatctatacatc
taccattacaaaagtggaaataaagtcatgttggtgctattttctccaccagccaaaaag
gtcaatttttttgtcgttgacactgtgcggaccaaccaaatgccgaatttagttaatctt
tataatgaggagcggcttaaaaagctatcgcaggctgacgttgtcgagagttccgtgccc
gctagggattattcattttcaattcaagtggagacagatattcgccaagtctatcgtcaa
atgaatcgtttactgcaaacgtacaaagatgagaaacgaggaccaacttttgtggctatt
cagtctccccaagatcttcatgcgactgcatcgcaaattcaaacacttaacgaattcccg
ctagttcccatccatagtactgatcccgacggattatacaatgtgctcgactggcagaga
gtgggctcaaaagtttgcttgcgtcatttcctgcgtttacgcactgtcctcgacgctaat
ctggaacagtgtcgctacttccacattcctattggaaatttgccctccgatgccaatctt
ttcggtgccgacctcttcttcgcccgccatttaattcgaaataattgtattctttggtgt
tcaccgactgaaagacctgatctgggtggcaaagaggctgatgacaatcggcttgtaacg
gaaattgaagatgccacaactacactagtcgtcaacaaccccggagtatacaccaatgtc
tgtgtcgagatggacgtggatgcgttagccgttactactctacttcagtcacatcaagtc
ttggacgttgaaggcacaagctcaagcactgctttcgatgttccccaagtatcgctaaag
gacatgctcaatgataatcatactgcagaacttagcagttacagcgaatcagccatgtgc
gtgacagtctttcgagttctcaagtcagtagtagcatcttggcttcgagatatttccgta
catcgcaatgtcttcgctgactttcaagttatccacttctacagatggctgcgcagcccc
actgccttgctctatgaccctgcattgcgccgtatgctgcaaaacctcatgcgcaagtac
tttgttcaactgttggccgaatttcaaagacttggagcaacggtcgtctacgccgatttc
ggccgtatcgttctaggcactaaaaagcgacgcattcctgacgctttgtcatatgttagc
tttgtttgtgcaagtttacatcagaaagaactttttcgcagtctcgaactcaacgttcaa
cattgttggcagctactcgtgtggctcgatcctgccaattacggcggagtaaaaggaaaa
tcggattcagaaaaggaaaatgaagaaaataacgaagaccgcagttttgtcgaggacgaa
gaagaagaaagcactgctgtcgaaatgaactgggatgttgttaaatacttccccgaagag
ccgccctgtcaagaatatttcaacactgtgattgccacttatatttcggccattcacgac
cacttggccgaaacatacggtgatcgcatacccggtgcaactccagtgcgacgaatccgt
tcttcacaaacgcagcgtagtaaagttggccctactccagattcgcttaaagaattcacg
cgtgagctggttgaccaggaaatcgcccagcatttgttccgcgttgttcaaaaacttcac
aaacagcttcaaggacaccacggaaccgaaaatggattgagcaatccttctcttgaattc
gttaaagctgtttgtcgcgtgtttcagctggatgtcaacattgtcgatgaagtcactcga
ctgagaaggaatctcctcaaacttattggagtaggggaattcagtcaagaagctgattgg
aaggattcgtgcctgtcatacgttttacccgaagttatctgtcctacctgcaatcattgc
cgagatattgatttatgcagagatccgcacgagtcagaagatcgtggaatacctacgtgg
caatgtccgctttgtaaatcgagctatgacagtagcgagattgaatctatgctgctggat
gtcgtcaaccgcaaaaccatgagctttgtattgcaggatctacagtgcaagaagtgtaaa
cagataaaacgagaaaacttatctcagttttgctcgtgcgccggcgaatttcagctatta
caatcttctacgggcttgttgcagactttgtcgatttttgagcgcgtcagcaagaaattt
ggtctcacgctacttcatgaaaccgtagagcaattgttgaaaatgaatcaaaagtcgatc
aagtaa

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