Daphnia pulicaria: 124337573
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Entry
124337573 CDS
T08670
Name
(RefSeq) cartilage oligomeric matrix protein-like isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
dpz
Daphnia pulicaria
Pathway
dpz04145
Phagosome
dpz04512
ECM-receptor interaction
dpz04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124337573
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
124337573
09142 Cell motility
04820 Cytoskeleton in muscle cells
124337573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpz04131
]
124337573
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dpz04147
]
124337573
00536 Glycosaminoglycan binding proteins [BR:
dpz00536
]
124337573
Membrane trafficking [BR:
dpz04131
]
Endocytosis
Phagocytosis
Opsonins
124337573
Exosome [BR:
dpz04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
124337573
Exosomal proteins of colorectal cancer cells
124337573
Exosomal proteins of bladder cancer cells
124337573
Glycosaminoglycan binding proteins [BR:
dpz00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
124337573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_3
EGF_CA
COMP
EGF_LMN_ATRN
cEGF
DUF7630
Motif
Other DBs
NCBI-GeneID:
124337573
NCBI-ProteinID:
XP_046647561
LinkDB
All DBs
Position
4:complement(14501890..14513312)
Genome browser
AA seq
1139 aa
AA seq
DB search
MVKLLLTRMLALAGILAFLCTLVNASTSSSHLHHDQGLSEKLSEVASRDVVYLSLKQVTP
RRRARPAKETLLSIEPAQSVEHHRFSLHVDRRTKRVIVETTDAKGTLHSSYLLVDGLEHR
SVIDNLVVAIHQSPVGQKSRHRQPVEELPTDEGFAAAESVDKEDGQDDPAVDDDDDEIKA
FVYVDCQPVGIISLAGSLRHLIQQSPSGALVASRDRRFPVTVDSDVPTDKVLKRYGCPAT
ADQDMQAVQANEIYSYSRRETYGPVRNCANTVTGQKCPIFSQPTIVTSSTSSSSSAVRGD
IPVVSPDLDDRDGALIKVISELIAAIKELKVEVQANRQETRHLRDALENCEACKPGKPKK
DTCSSTPPPCFPGVNCMETADGVRCGPCPRGYIGNGRTCRPGTTCADRPCFPGVRCVDTE
NGAQCGPCPAGFVGDGQRCRPDNACKSNPCYAGVTCQNLEDPPYYRCGPCPAGTTGNGTF
CSDIDECDLANPCDPRSRCHNLITGFRCDSCPPGFTGPAVQGVGLDYARLNRQRCVDINE
CADGKNGGCVPNSRCINTEGSFQCGECLEGFFGNQAVGCEDTPGMCPDGTRCDANADCER
PSGNGPYRCKCKIGYAGNGKVCGPDRDLDGWPDYDLSCTDDKCRKDNCVDTPNSGQEDAD
RDGIGDACDDDADNDGIPNTPRALSGPDNCPLVANPTQTDSDPEGSDKKGDACDNCPTVA
NLDQEDTDGDGKGDACDDDLDNDRILNSRDNCPKTPNPDQRDSDGDGLGDACDNCPNTPN
PNQFDSDSDLVGDVCDTNIDRDKDGIQDSLDNCPTIPNSDQRDADNDGLGDDCDPDADND
GIRNEKDNCPIVYNPDQVDTDRNGVGDACQDDQDADNVPDFLDNCPNNSKIYATDFRTYQ
TVVLDPEGDSQIDPNWVIYNKGAEIVQTMNSDPGLAVGFHRFGGVDFEGTFFVDTEIDDD
YVGFIFSYQDNAHFYTIMWKKNTQTYWQATPFRAVAEPGIQLKLVKSNTGPGQMMRNSLW
HTGDTENQVKLLWKDPRNVGWKEKVAYRWLLLHRPKIDLIRLRIFEGENMVADSGNVFDS
TLKGGRLGVFCFSQEMIIWSDLVYRCNDAVPEAIYKELPPRLQKEVQVDRTRAPSLSAN
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagttgctgttaactaggatgctggccctggccggcatcttggcatttctgtgc
actctggtgaacgcatcgacttcttcctcccaccttcatcacgatcaaggtttatcggag
aaactatccgaagtggcgagccgcgatgtcgtctatctctcactgaagcaggtcacgcca
cgtcgtcgggcccgtccagccaaagagactttactgtccatcgagccggcccagtcggta
gagcaccatcgtttttcacttcacgtcgatcgtcgtaccaaacgagtcatcgtggagacg
acggacgccaaaggaacgctgcactcgtcctatctgttggtggatggattggagcatcgc
tccgtcatcgacaacttggtggtggccatccatcagtcgccagtcggtcagaaaagtcgc
catcgacagccggtcgaagagctgccgacggatgaagggttcgctgcggccgagtctgtc
gacaaggaagacggacaggacgatcctgccgtcgacgacgacgatgatgagatcaaggcc
ttcgtctatgtcgactgtcagccggttggcatcatttcactggccggctctctcaggcac
ctgatccagcagtcgccatccggagctcttgtcgcgtctcgggatcggaggttccccgtc
acggtcgactctgacgtgccaacggacaaggtcttgaagcgttacggatgccctgccact
gccgaccaggatatgcaggccgtccaagccaacgagatttattcttactccagacgagag
acgtacggtccggtccgaaattgcgccaacacggtgacaggccaaaagtgtccgattttc
agccagccgaccatcgttacctcatccacatcttcctcctctagcgcggtgagaggtgat
attcccgttgtttctccggatttggacgaccgagatggggctcttattaaagtcatcagc
gaactgattgccgccatcaaagagctgaaggtcgaagtccaagccaacaggcaagaaacg
cgccatttgagggacgcgctcgagaactgcgaggcctgcaaaccaggcaaaccaaagaag
gacacttgttcgtccaccccaccaccttgcttcccgggcgtcaattgcatggagacggcc
gacggggttcgatgcggaccgtgcccgcgcggctacatcggaaacggacgaacttgccgg
ccaggaaccacctgcgctgatcgaccttgtttccccggtgttcgctgcgtggataccgag
aacggcgcccagtgcgggccgtgcccggcaggattcgttggtgacggacaacgctgtcga
ccggacaacgcttgcaaaagcaatccctgctacgctggtgtgacctgtcagaatttggaa
gaccctccctattatcggtgtggaccttgtccagctggtacgaccggaaacggaactttc
tgtagcgacatcgacgagtgcgatttagccaatccttgcgacccgcgatcgcgctgtcac
aatttgattacgggtttccgctgcgattcttgccctcccggcttcaccggaccggccgtc
cagggcgttggtctggactacgcccgtctcaaccggcagcgttgcgtcgacatcaacgag
tgcgccgacgggaagaatggcggatgcgtccctaattcgcgctgcatcaacacagagggt
tcgttccaatgtggtgaatgtctggaaggcttctttggtaaccaggcggtgggctgtgag
gacacacccgggatgtgcccggacggaacccgctgtgatgccaacgccgattgtgaacga
ccgtcaggcaacggtccgtaccgttgcaagtgcaaaattggttatgccggaaacggtaaa
gtttgcggtcctgatcgcgatctggacggttggcccgactacgacttatcctgcaccgat
gacaaatgtcgcaaggataactgcgtcgacacgcccaactctggacaagaggacgctgat
cgcgatgggatcggagatgcctgtgacgatgatgccgataacgacggtatccccaatact
ccccgcgccctgagtggtccggacaattgcccattggtagcaaaccccactcaaacagat
tcggatccggaaggctccgacaaaaaaggtgacgcttgcgataactgccccacagttgcc
aatttggaccaggaagacacagacggtgatggaaaaggcgatgcctgcgacgacgatctc
gacaatgaccgaattctcaattctcgtgataattgccccaagacacccaatccggatcaa
cgcgactcggatggcgacggcctgggcgacgcttgcgacaactgtcccaatacgcccaat
cccaatcaattcgacagcgacagcgatttggtcggcgacgtctgcgacacaaacatcgat
cgtgacaaggacggtatccaggactctttggacaactgcccaacaattcccaacagcgac
cagcgtgacgccgataacgacggcctgggtgacgactgcgatccggatgccgataacgat
ggcatccgcaacgagaaggacaactgcccgatcgtctataaccccgatcaggtggatacg
gaccgcaacggagtcggagacgcttgccaggacgatcaggatgcggataacgtgcccgat
ttcttggacaattgccccaacaactcaaagatctacgccaccgacttccgcacgtaccag
acggtcgtcctcgatccggagggcgattcccagatcgatcccaactgggtcatttacaac
aaaggcgccgaaatcgtccagacgatgaacagcgatccgggtttggccgtcggcttccat
cgcttcggcggtgtcgactttgagggcacattcttcgttgacacagagatcgacgacgac
tatgttggctttattttcagctatcaggacaacgctcatttttacaccatcatgtggaag
aagaacacgcagacctactggcaggcaacacctttccgggccgtcgccgagcccggcatc
cagctcaaattggtcaagtctaatacaggaccgggtcagatgatgaggaactcgctttgg
cacacgggcgacaccgaaaatcaggtgaaattgctgtggaaagatccccgcaacgtcgga
tggaaggagaaggtggcctaccgctggctgctgctccatcggcccaagatcgacttgatc
cgtctgcgtatcttcgaaggagagaatatggtggccgattcgggcaacgtctttgactct
accctcaagggcggtcgattgggtgtcttctgcttctcgcaggagatgatcatctggtcc
gatttggtttaccgatgcaacgacgccgtgcctgaagccatctacaaggaacttccaccc
cgactgcagaaggaggtacaggtggaccgcacccgggcaccgagtctttccgccaactga
DBGET
integrated database retrieval system
