Daphnia pulicaria: 124337884
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Entry
124337884 CDS
T08670
Name
(RefSeq) chitin synthase chs-2-like isoform X1
KO
K00698
chitin synthase [EC:
2.4.1.16
]
Organism
dpz
Daphnia pulicaria
Pathway
dpz00520
Amino sugar and nucleotide sugar metabolism
dpz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
124337884
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
dpz01003
]
124337884
Enzymes [BR:
dpz01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.16 chitin synthase
124337884
Glycosyltransferases [BR:
dpz01003
]
Polysaccharide
Structural polysaccharide
124337884
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chitin_synth_2
ChitinSynthase_IV_N
Glyco_trans_2_3
Glyco_tranf_2_3
Glycos_transf_2
Motif
Other DBs
NCBI-GeneID:
124337884
NCBI-ProteinID:
XP_046647855
LinkDB
All DBs
Position
4:22329296..22340594
Genome browser
AA seq
1762 aa
AA seq
DB search
MVITFMAVCPIPLPDGFSYLLSLFSFIISYSFSFFSSSGFLFHPLSSSPSLYRLVAHFGL
AGASSIQQQLQEIQSSRVATAVENPLHFALPGFQQQSQEQGCPFGPDFNFGSIPYTFKGP
SALYSGRRSALEDLSPVNKPLVSLDINIDSKHSVSSRGARARSVNTMAPQQPLMNVANDP
GVSDDEEYTEDEESPLTNNDIYGGSQRSAIDTKGWDVFRNLPPEDVSGSLANQKVVEATV
KIFKVVAYLLTFVIVLSAGVISKGTVLFMTSQIKPGRSTEYCTRRDGRSFQAHVSEEERV
SWMWALLFSFVIPEFFMWFRSSRICFFRQWKRPRFFDFIIVVLFETFHVVGVAMLIYAVL
PNMKVVQGAMLTNCVCLVPGILGMLSRNSKESKRFAKSIVDILAIVAQLSGCFLWVIPEL
NKTNWQHVWMLPTSLILTSFGWWENYVDKHSPIGFVKYLGKIKEKMKSTRYFTYIFVSVW
KVMVFFTSMLLIELLTVGKMDNIFLFFQPGFGDHKVNLTEIISNKFAQLDIPGAGRLTET
ETISSWPNTAIYLCVIQSFAAFLCFGLGKFACKICIQGFSYAFPVNLTIPVTISLLIAFC
GLRIGNPCMFSDTIPPYLYWDCPNGDFLTEVITNQYAWVWLLWLLSQTWITLHIWTPKCE
RLAHTEKLFVNPFYCSLLIDQSMGMNRRRDDESDVKTEDIELERDGVADTDMTQYYETIS
IGTESSTATPKTIKASDNITRIYTCATMWHETTEEILTFLKSIFHMDEDQSARRVAQKYL
KIVDPDYYEYETHIFFDDAFELSDHSDEDVVANRFVKLLMNVMDEAASHVHQTNIRLRPP
KKYPTPYGGRLVWTLPGKTKMIAHLKDKGKIRHRKRWSQVMYMYYLLGHKLMELPISVDR
KEVVAENTYLLTLDGDIDFLPNAVQLLVDLMKKNRNLGAACGRIHPVGSGPMVWYQLFEY
AIGHWLQKATEHMIGCVLCSPGCFSLFRGKALMDDNVMRKYTTRSDEARHYVQYDQGEDR
WLCTLLLQRGYRVEYSAASDAYTHCPEGFNEFYNQRRRWVPSTMANIMDLLGDYKRTIKI
NDNISLPYIFYQSMLMGGTILGPGTIFLMLVGAFVAAFRIDNWTSFIYNLVPILLFMFIC
FVAKSEIQLLLAQILSACYALIMMAVIVGTALQLGEDGIGSPSAIFLIALSGSFFIAACL
HPQEFWCVVPGLLYLMMIPSMYLLLILYSIINLNVVSWGTREVQTKKSKKEIEREKKEAE
EDAKKAKMQKKSGLLGFFNSSMTDSEEGSLELSFAGLFKIMCCTHQKAVDEKQQLLRIAD
TLESLNKRLDVIERAVDPHGLMAPRRRSMSRTSHRGGGGVDGLASVHENDGGSNSDDSDD
ESDSVEPKTERDDLINPYWIEDKDLKRGEVDYLSGPEIQFWKDLLDKYLYPIDENKEEQA
RIASDLIELRNKSVFFFFMFNALFILIVFLLQLNKGALHVDWPLGVKTNITYIEETSEVL
ITKEYLQLEPIGLVFVFFFGLILIIQFVAMLFHRFGTLSHILASTELSCSRKVDDLSEDA
FIDKNAVEIVRNLQRLRGIDDADEDNESGSYRDRIGHRRTIHNLEKQKQKKRVTGTLDVA
FKKRFFSMTAEGEIEDTPVMSNMRKIPMRRETIKALEVRRNTVMGEARKRSTMQTLGANN
EFNRNKARHRTKATVVGNTVERIYSLNAQLNQVVGTGNGAANPNEGYEMSSDDERSNVTR
NSVRHTQPTPQPVLAEVRNSQL
NT seq
5289 nt
NT seq
+upstream
nt +downstream
nt
atggttataacattcatggctgtttgcccgattcccttacctgacgggttctcttacctg
ttgagcctcttctcctttatcatctcttactctttctccttcttttcttcctccggtttc
cttttccacccgctttcttcttccccttcactttatcggttggtagcgcatttcggtctg
gctggcgctagcagcattcagcagcagctacaagagattcagtcgagtagagtcgctacg
gcagttgagaatccccttcacttcgctctccccggttttcaacaacaatcacaagaacaa
ggatgtccttttggaccggattttaatttcggcagcataccttacacattcaaaggaccc
agtgccctttactctggtcgaaggagcgccctagaagatttaagcccagtcaacaaaccg
ctcgtcagtttggatattaatattgattcaaaacacagcgtgagcagccgaggagcacgg
gcgcggagtgttaacacgatggcgcctcaacagccgctgatgaacgtggcaaatgaccca
ggcgtctccgacgatgaggaatacacggaagacgaagaaagtccgttgaccaataacgat
atctatggcggcagccaaagaagcgcaatcgacacgaaaggatgggacgtgtttcgcaat
ttaccaccggaagatgtgagtggttctcttgccaatcaaaaggttgtcgaggcgacagtc
aaaatcttcaaggtagtggcctacctgttgacatttgttatcgtcctttcggccggtgtc
atctccaaaggcaccgtcttgtttatgacctctcaaatcaaacctggacgctcaactgaa
tactgcactcgacgagatgggcgatcgtttcaagcgcacgtgagcgaagaggaacgcgtc
tcgtggatgtgggcgctacttttcagtttcgtcattcccgaattcttcatgtggttccgt
tcgtcgcgtatttgtttctttcgacaatggaaaagacctcgtttcttcgattttatcatc
gtcgttctcttcgagacatttcacgtcgttggtgtcgccatgctcatctacgccgtctta
cccaacatgaaggtggtccagggtgctatgctcacgaattgtgtctgcctcgttcccggc
attcttggcatgctgtcgcgcaattccaaggaatcgaagcgattcgccaaatcgattgtc
gacattttagctatcgtggcccagcttagtggatgcttcctctgggttattccggaattg
aacaagacgaactggcagcacgtttggatgttgcctacttcgctcattctgacgtcgttt
ggatggtgggagaattacgtcgacaaacattcaccaatcgggtttgtcaaatatttgggc
aagatcaaggaaaagatgaaatcgacccgttacttcacctacatatttgtaagcgtgtgg
aaagtgatggtcttttttacttccatgctcttgatcgaactcctcactgtcggaaaaatg
gacaacattttcctgttcttccaaccgggtttcggcgatcacaaggtcaatttgaccgag
atcatttctaacaaatttgctcagctggatattcccggtgctggacgtctgactgaaacg
gaaaccatctcatcctggcccaatacagccatctacctttgcgttattcaatcattcgcc
gctttcctttgctttggactcggaaaattcgcttgcaaaatttgcatccagggtttcagc
tacgcttttccagtaaacttgaccattccagttacaatttctctcttgattgccttttgc
ggcttgcggattggcaatccgtgcatgttttctgacactattccaccttatttgtattgg
gattgtcccaacggcgatttccttaccgaagtcatcaccaatcaatacgcctgggtctgg
ctcctttggctcctgtcgcagacttggatcacgttgcacatctggactccgaaatgcgaa
cgtttggctcacaccgagaaattgttcgtcaatcccttttattgctcgcttctaatcgac
cagtcgatgggtatgaaccggcgacgtgacgacgaaagcgatgtcaaaacggaagacatt
gaactggaacgcgacggagttgccgatacggacatgactcaatattacgaaacgatatct
attggcacggaatcgtcaacagccacacccaaaaccatcaaggcctccgataacatcact
cgcatctacacctgcgcaactatgtggcacgaaacaactgaagagattctgaccttcttg
aagtcaatcttccatatggacgaggaccagtctgcccgtcgtgtcgctcaaaaatatctc
aagattgtcgatcccgattattacgaatacgaaacccacatctttttcgatgacgccttc
gagttgagtgaccacagtgacgaagacgtggtagctaaccgattcgtaaagttgctaatg
aacgtcatggatgaggcagcatcacacgtccatcagaccaacatccgacttcgcccgcct
aaaaagtacccaacaccctatggaggtcgccttgtttggaccctacccggcaagaccaag
atgattgctcacttgaaggacaagggcaaaatccgtcacaggaagcgatggagtcaagtc
atgtacatgtactaccttttgggacacaaacttatggagttgcctatctcggtcgatcgt
aaggaagttgttgccgagaacacgtacttgctcacccttgacggagacattgactttttg
cctaacgctgtacaactcttggtcgatttgatgaaaaagaaccgtaacctgggcgccgct
tgcggacgcattcatcccgtcggatccggccctatggtgtggtaccaactcttcgaatac
gctatcggccattggctccaaaaggctaccgaacatatgatcggctgcgtcttgtgtagt
cctggttgcttctctctcttcagaggaaaagctcttatggatgacaacgttatgcgcaag
tacacgacccgctccgacgaagccagacattacgtccagtacgatcagggcgaagatcgt
tggctctgtaccttactcctccagcgtggctatcgtgtcgaatactccgccgctagtgac
gcctacactcactgtcccgaaggtttcaatgaattttataaccaacgtcgtcgctgggtt
ccatccaccatggccaacattatggatttgctgggcgattacaaacgaaccatcaaaatc
aacgacaacatttcgctgccttacattttctaccagagcatgttgatgggtggtacgatc
cttggacccggtaccattttcctcatgttggtgggtgctttcgtcgccgctttccgtatt
gacaactggactagcttcatctacaatttggtccccattctccttttcatgttcatttgc
tttgtcgctaaatcagaaattcagctacttttggcccaaatattatcagcctgttatgcc
ttaatcatgatggctgtaattgttggtacagcgttacagttaggcgaggacggcatcggt
tcaccttcagctattttcttgatagccttatcgggctcattctttatagcagcctgtctc
catccgcaagagttttggtgcgtcgtaccgggtcttctctatttgatgatgattccctct
atgtacttgctgttgattctctattccatcatcaacttgaacgtcgtctcatggggaaca
cgtgaagtccaaaccaaaaaatctaaaaaggaaattgaaagggaaaagaaagaagctgaa
gaagatgctaaaaaagccaaaatgcaaaagaaatctggcttacttggatttttcaacagt
tctatgacggattcggaggaaggatcgctggaactgagctttgctggacttttcaagatc
atgtgttgtacccatcagaaagctgtcgacgagaaacaacagttgcttcgcatagctgac
actttggaatccctcaacaaacgattagacgtcattgaaagagctgtagatccgcacggt
ttgatggcacctcgccgtcgctccatgtcgcgtacttcacaccgcggaggaggcggtgtc
gatggattggcttccgttcatgaaaatgatggtggatccaattctgacgacagtgatgac
gaaagtgatagcgttgaacccaaaactgaacgtgacgacctaatcaatccctactggatc
gaagataaggatcttaagcgtggagaggtggactacttgtctggccctgaaatccaattc
tggaaagacttgcttgacaaatatttgtaccccatcgacgagaacaaagaagaacaggct
cgtattgcgtctgatttgattgagctgcggaacaagtccgtcttcttcttcttcatgttc
aatgctcttttcatcttgattgtgttcttgctgcaactgaacaaaggtgctctgcacgtt
gattggcctctgggtgtcaaaaccaacattacctacatcgaagaaacctccgaggttttg
atcactaaagagtacttgcaactcgaacctattggtctggttttcgtcttcttcttcggc
ttgattcttattatccagtttgtggccatgttgttccatcgttttggaacattgtcccac
attttggcctctactgaacttagctgcagtcgcaaggttgacgacttgtccgaagatgct
tttattgacaaaaacgctgtcgaaatcgttcgtaatttacaacggttgcgaggcattgac
gacgctgacgaggataacgaatccggttcttatcgcgatcgcattggtcatcgacgaacg
attcacaacttggaaaaacagaagcagaagaaacgcgttactggcacgttggatgtggct
ttcaagaagcgcttcttttcaatgactgccgaaggcgagattgaagataccccggtaatg
agcaatatgcgcaagatccccatgcgtcgtgagaccatcaaggcccttgaggtccgtcga
aacacagttatgggagaggctcgtaaacgatcgaccatgcaaacacttggagccaacaat
gaatttaaccgtaacaaagcccggcatcgtactaaagctaccgttgtcggaaacactgtc
gagcgcatatactcactcaacgctcaactcaaccaagtggtaggtaccggtaatggagcc
gcaaatcccaacgaaggctatgaaatgagctcggacgacgagcgttcaaacgtcacccgc
aactcagtgcgccatacgcaaccaacgccgcagcccgtcctggctgaagtgcgtaacagt
cagttgtga
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