Daphnia pulicaria: 124337893
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Entry
124337893 CDS
T08670
Name
(RefSeq) caprin-1-like isoform X1
KO
K18743
caprin-1
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpz03019
]
124337893
Messenger RNA biogenesis [BR:
dpz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
124337893
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Gene cluster
GFIT
Motif
Pfam:
Caprin-1_dimer
LOH1CR12
Motif
Other DBs
NCBI-GeneID:
124337893
NCBI-ProteinID:
XP_046647867
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Position
4:22389323..22392355
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AA seq
622 aa
AA seq
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MPSIASNNTSVKVEKVSVLDLPESFKSANTVIEKKCRNLEKRKIRLDGYREELARGKGLS
EEQQRATDRYDEVVANLELTKEFLTAFEKIGSETSKEEKKRKKKEIFERQQYELSRFKEL
FTIQEIFNCLCSPSAREDFLNGLHGSPQLTESDLQKLDTFYSLISIDRQNLPKKFNDAVA
NSATHFQHLMEGRNKEVAGSTYREIKDLVFSIINNGYFDWKAPPEVEPEPVEPEIVEPVM
EKSEAFQTTHMETVYQNMPDEPTYVETGMEYIEPQVSLPIQPQVVPQAAAYFPVEIDTDF
NFIQESMIDAKPVLPTIPASVPMPIQTAAHVPVSLASMDSAVVMVHSQMPHLAYPHYAAS
MYAAHAAPLVPGPPSMQLPTTQHQQQPPPQQMHQQQQPSNDLPIESVIQENPAPLTAQVE
AQENRATASSPWAEEPQDDIPAFQQDQSRNESNTWTNSNYRSNDQDWAILGTDGRRGGYR
GRGNGGPRGGSRGGGSGYYNNSRGGYGGGDRQGNGERNYQNNDRHQGNGGDRNGMERGSY
QGGERSYQSNNGGGRYQGNNGERNYNQGGSYRSSGDRGGNSSYAPRGNSGGYRGGPPRGA
PRGSSRGSGGNYEGRNTAYAKE
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgatcgcgtctaacaatacatctgtaaaagtggagaaagtttcggtcttggac
cttccggaatctttcaaatctgctaatactgttatagagaagaaatgcagaaatttggaa
aaacggaagataaggcttgatggatatcgtgaagagttggcaagaggaaagggtctgtca
gaagaacagcagcgtgccactgatcgctatgatgaggttgttgccaatttggagttgacc
aaagagttcttgacagcttttgagaaaattgggagtgaaacgagcaaagaagagaagaaa
aggaagaagaaagaaatctttgagaggcaacagtatgagttatctcgctttaaagagctt
ttcacaatccaagaaatcttcaattgcttatgttccccctctgctcgtgaagatttcttg
aatgggctgcacggttcacctcaacttacagaatctgatctccaaaaactagatactttc
tacagcctgatttccattgaccgtcaaaatcttccaaagaaattcaatgatgctgttgca
aactcagccacccattttcaacatctaatggagggacgtaacaaagaagtagcaggtagc
acatatcgcgaaattaaagacctagtctttagcattatcaacaacggatactttgattgg
aaggctcctccagaagttgagcctgagcctgttgaacctgaaattgttgagcctgtcatg
gagaaatcagaagcgttccagacgacccacatggaaacggtttaccaaaacatgccagat
gagccaacctatgttgaaactggaatggagtacattgagcctcaagtctctttgcctatt
cagccacaagtcgtcccacaagctgcagcgtacttccccgtcgaaatcgacacggatttc
aatttcattcaagaatcaatgattgatgctaaaccagttttacccactatccctgcatcc
gtccccatgcccattcaaaccgctgctcatgttcctgtttctctcgcatcgatggactct
gcagttgtgatggtccattctcagatgccccacctggcgtaccctcactatgcagcttcg
atgtacgctgcccatgctgcaccacttgtgcctggtccaccatctatgcagctaccaacc
acacagcatcagcaacaaccacctccacaacagatgcatcaacagcaacaaccttctaat
gatctccctatcgaatccgtcatccaagaaaacccagctcctcttaccgctcaggtggaa
gcccaagaaaaccgggcaacagcaagttcaccatgggctgaagagcctcaagatgatatt
ccggctttccaacaggatcagagtcgtaacgaatccaacacgtggactaattcaaattac
cgttcaaacgatcaagactgggctattttaggtacagatggtcgtcgcggtggctaccgt
ggtcgtggtaacggtgggcctagaggaggatcacgtggtggcggatcaggctactataac
aactccagaggtggatatggtggtggtgatcgtcaaggaaacggcgaaaggaactatcag
aataatgatcgtcatcaaggtaatggaggtgatcgcaacggaatggaacgcggctcttat
cagggtggcgaacgttcctatcaaagcaacaatggtggaggtcgctaccaaggcaacaat
ggcgaacgaaactacaaccagggcggttcctaccgatcatctggtgacagaggaggaaac
tcgtcgtatgcgccaagaggcaacagtggtggataccgtggtggcccaccccgaggagct
cctagaggatcatctcgaggaagtggtggtaattacgaaggcagaaacacagcgtacgct
aaagaataa
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