KEGG   Daphnia pulicaria: 124337956
Entry
124337956         CDS       T08670                                 
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1-like
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
dpz  Daphnia pulicaria
Pathway
dpz03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dpz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124337956
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dpz03041]
    124337956
   04121 Ubiquitin system [BR:dpz04121]
    124337956
Spliceosome [BR:dpz03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    124337956
 Complex C
   U4/U6.U5 tri-SnRNP specific factors
    124337956
Ubiquitin system [BR:dpz04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    124337956
SSDB
Motif
Pfam: SART-1 HIND
Other DBs
NCBI-GeneID: 124337956
NCBI-ProteinID: XP_046647939
LinkDB
Position
4:complement(4467772..4471263)
AA seq 739 aa
MDRKESRDHNNSRKRRHRSPSRSPSRSHSKSYASVKSKQIKEDISLNIQSEELLTGKGND
ERPVANSTNDTSISIEETNRIRAELGLKPLEIGGENSNVEASTEKKDVHVPAENLREKKA
TEELRRKLDERREKRQIEQKLAQVRTLAHTTADDDDNAVSWVEKSRRIQKEKEEANKRAK
MLEEMDEAFGVGDMVTTELIKQKAKAYTSRDLRGIKVEHDREMIAEGKEVVLTLKDQNIL
QEEGDVLVNVNLVDIERYKKNNEIKKQRPGYQPYEEEEVDELGLPKPKLLLAKYDTEIEG
EKHDSFVLGKIGDEEAKMKAQKLMKDKLKLQQKKIESLESRPLQIASEYYTAEEMVSFKK
VKRRVKKVRSKGDGILKADDLIQETQETTSSDLGSRSRKKRMDEEVTEDLSGFKITVDES
QKEIRQALLKANKLKERKADQWDMNMITRSLKREPLEETEGMEEDPLKSSIILNATAEFC
RTLGDIPTYGMAGNRDEDEDELMDFERQLAEERRRNQEKEERKREAERLQERGGWNVLER
ENDQGSDDSMDVDRNEKDNATVILDEEPDVGSGMAAALKLAMSKGYLEKEEKKRIVISKS
AQELQAQRYTIEDKAAEDDKYSRRNRFDGPVVEFKDKEGYKPLPKLEYIDDNGKAMSTKE
AFRHLSHKFHGKGSGKLKSEKRAKKDEDKMLMNRMSSTDTPLNTLKKLQDKQKELQSPYV
VLSGKMAPTSIVKPGKGKK
NT seq 2220 nt   +upstreamnt  +downstreamnt
atggaccgaaaagaaagtcgcgatcataataattctcgaaaaagaagacatcgttcccca
tctaggtctccgtcaagatcacattcaaaaagttatgcctccgtcaaatccaaacaaata
aaggaagatataagtctcaacattcagagcgaagaactgttgacaggaaaagggaatgat
gaaagaccagttgctaattcaaccaatgatacttccatttcgattgaggaaaccaacaga
ataagagctgaacttggtttaaagccattggagattggaggagaaaattcaaatgttgaa
gccagtactgagaaaaaggatgttcatgtcccagcagagaacctccgtgaaaagaaagcc
acagaagagttgagacgaaaactagatgaaagacgagaaaagaggcaaatagaacaaaag
cttgcacaagtgcgcactcttgctcatacaacagctgatgatgatgacaatgctgttagc
tgggttgaaaaatcaagaaggattcagaaagaaaaggaagaagctaataaaagagcaaaa
atgcttgaagaaatggatgaagcatttggtgtaggagatatggtaactactgaactgatt
aaacaaaaagcgaaagcatacacaagtagagacttacgaggaataaaagtagaacatgac
cgggaaatgatagctgaagggaaagaagtagtattgactcttaaagatcaaaacatcttg
caagaggaaggggatgttttggtgaatgtcaaccttgttgatatagaacgctacaaaaag
aacaatgaaatcaagaaacagagaccgggatatcagccctatgaagaggaagaagttgat
gaattgggccttcccaaaccaaagctcttgcttgctaaatatgacacagaaatagaagga
gaaaaacatgatagctttgtcctaggtaaaattggagatgaagaagccaaaatgaaagcc
caaaagttgatgaaagacaaactcaaattgcaacagaagaaaattgaatcactggaatcg
cgaccgctccaaattgcatctgaatattacacagcagaagaaatggtttccttcaaaaaa
gttaaacgtcgcgtcaaaaaggttcgatccaaaggcgacggcattttaaaagctgacgat
cttattcaagaaacgcaagaaacaacttcgtcagacttgggatcgagatctcgaaagaag
agaatggatgaagaggtcacagaagatttaagcggattcaagattactgtagacgaatcc
caaaaagaaatacgtcaggcactattaaaagctaataaactaaaagaaaggaaggctgat
cagtgggacatgaacatgattacgcggtcattaaaacgcgagcctttggaagaaactgaa
ggtatggaagaggatcctctgaagagtagtatcatactgaatgccacagcagaattctgt
cgtactcttggtgacataccaacctatggtatggcaggcaatcgtgatgaagacgaagat
gagttaatggatttcgagcgacagttggcagaagaacgcagaagaaatcaagaaaaagaa
gaacgaaaaagggaggctgagcgtcttcaagaacgcggtggatggaatgttctggaacgt
gaaaacgatcaaggttccgacgacagcatggatgtcgatcgtaatgaaaaggataacgct
actgttatcctggacgaggaacctgatgtcggctcgggaatggctgcagctttgaaattg
gctatgagcaaaggctatctggagaaagaagagaaaaagaggatagttatttctaagtcc
gcccaagagctgcaggcgcagcgctacaccatagaagataaagcagccgaggacgacaaa
tattcaagaagaaatcgttttgatggcccggttgtagaatttaaagacaaagaaggctac
aaacctttgccaaaacttgagtacatcgacgataatggcaaggcaatgtcgactaaagaa
gctttccgacacttatcacacaagtttcatggtaaaggatccggtaaacttaagtctgaa
aagagggccaaaaaagatgaggataaaatgctgatgaatcgaatgtcctcaactgacaca
cctctgaacacgctaaaaaaattacaagacaagcaaaaagaattacaaagtccatacgtg
gtcctcagcgggaaaatggcaccaacatcaatagtaaaacctggcaagggaaagaaatga

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