Daphnia pulicaria: 124338020
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Entry
124338020 CDS
T08670
Name
(RefSeq) trichohyalin-like isoform X1
Organism
dpz
Daphnia pulicaria
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Cast
ERM_helical
Crescentin
Motif
Other DBs
NCBI-GeneID:
124338020
NCBI-ProteinID:
XP_046648002
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All DBs
Position
4:complement(3170868..3192598)
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AA seq
2365 aa
AA seq
DB search
MDPMDRRGTGSSPGMMGGGGGGGSGGGGGGLVPGSASQHHRSRSATRTSSTNANRSYHSL
DRDGHDREREFMPIRETRDGRDGRGGGGDMRDRSLERGMDGMGGGGGRGGSRRDRSMDRN
AMMDEEMLYGGGGGRDMVGPGGGMGGSGLPLPRSARQSPAVDMGMKGGNSNMMGNAGSGG
GGLTNRESYLMEMQGQNADLSRELGTLKRELEMTNQKLGSSMHSIKTFWSPELKKERALR
KEESAKYSLINDQLKLLNAENQKQAMLVRQLEEELRIRSMQNHHPSHEVRQQVETMYAEN
DHLSREVAILRETVKELELRIETQKQTLQSRDESIKKLLEMLQNKGMGSSLLVASPDVAE
FERLRSRLNESQTQTRYLQSMVNIRDQELDRARKESVLWQDKLKSLIQDPAHRGDHVTET
WAALLETKESRIAVMERDISLLEKELLQQQQLMQQQRDHWVRSIEQSNPTTPVPPRTATP
SQQAAAAAVAAAAQLYRHSPVNNGQTAQHKDAIEELRMEIGKRDQELLAMGAKMKTLEEQ
HQDYQRHIAVLKESLCAKEEHYNMLQTDVEELRQRHEEKNRIIEKKTQIALQATQERNRF
TAEVNEMRDHLDIRDRKINVLQRKIENLEDLLKEKDNQVDMARARMTAMQAHHCSSEGAV
SSLEEAIGDKEKQISQLREQRDRAEQEKHEERDLHEREIAEYKMKLHTLESEVEKLGVRL
DRALAEKDKLEAKLESSQSELGKSKAELDRVQGDAGKSSVEWESAKQRISRYEMENERLK
SENERLRHDLDRSTSTFGRTQLNVTQEAERIQEKLDKTQAELRRALAELRMNQSEWERSR
AEAEQLQEKVEKSQGEIYRLKAKLENAQSEKENLQEEYERCQGSVSRLHAERDKAISDVE
KVREELERCQSTLGKLQLQQEKTQQGYDKAQNDVDRLQERLDKALVESRKFQSEKEKYVY
DFDNMQAQLDKSAGQLSRVQKEKENIQQEMERIREKHDKNQALTMRLQKERDVVGQEAES
LREKLELVQSQVAKATRDRELLLSETESSRERFDKVNQNLLKVQTERDDLSAELSLLRDR
LDKAQANASKAMEERDSAVKETERLLEKSDRSQGEVYRLQGKLDTSLAEQERLRSESDKT
QLLASRAREDFRKAHEELQDVKESLDRALLQLSKSKEHEEKLKEELEKHSVDVEMLRERQ
EKSQSEYRRAYSEKEKLESELARVQFELERTSAQHSKAYATLEKTQEDFARKQVELEMIS
EKYERLQVELRRVQSECDRYRTECETQKEEVDRFAARIGKYQDLQERTKEEQDKLAVEAE
RYKDRLARVQSDMEKLQSHKERTDQENARLKVELERQAENVKQTVSVTRNQAAAESAAEL
VRVQGELSRSQNEIQRLQVELGRAQAESERHRDKYEAGQQEVQRLRLTCEKSDKELARVT
QDMERRIALMTKTSSDQDRCQMEMDRLRIEIEKVKDKYDRSQAEVVRITQKLEQEERDKE
KLKVQVAQLESHKDRAMGAGQKQCEELTERNQKLQMECERLSQEKERSSVQVQRLNLELE
KHLSKFQENSQASKKELDRLVEEREKLAREIQTTKTENERLREELHRLHRSLESSQGAKE
EVTKLQKMIDSMQNELGRLNAEREKLSSNMSQKDKQWEKMEKQLVKMEAELKKVSTERDQ
VIVQLEKSQEMLVTFQHELQQSDQGLERTKQENERLKREQERILRDVEQGSRDVMQAKEK
EFQRLQSHVQQQEKELAKSQQEMARDRQRAEKAERDLANAQRQLQERAGQLEGAASQAGQ
AVEMERKRAERAEQVGRELQESFVQQKKLSEQQQQHLAQLQQQIGQQQQQLAAQQQQLAQ
QQQHLQKAAGEQGAAAAAEVQKLRKELMSAQQEAQKALGERERASAQVAKTQQELKSAIV
ERERLQSQLEMLVNELSNRQLELQEATTARSDSEETTKLRRQVEEQRKQLEELRRSSDQR
AKQIEERQRALEEAERQAKKRKEALDQLDERLKQQQKNSPAAAAAGGPAGKQIAEKDSEI
KQLKEDSQRAQSETERLLQLMQMTQEEQFAKDKTIMELQEALRVERSKRAQASADERSAN
QDPRGQNRSQTTEESDQGNSSDALVQKREDWLSQRKDELEDVIQQLEEVIRIKEFAIDRL
TKELGDVRDQSALLEGQRTRSLDQKEDRIEELEEALRESVRITADREVALDAETQQRTIL
DQKVGRLEQRLQSMHNAKSLKCRQCRPNRLRLQELQSRLSQLLSERRGHLHELFDMKQEA
LEAAISERDAQLGLLEVSGIKTARAAERADDLRADRKRLMQMMKQQNEKRVKLLLEYEDE
NLAGIDGDDFHAGDSTEDSDDPVCK
NT seq
7098 nt
NT seq
+upstream
nt +downstream
nt
atggatcctatggatcggcgagggacgggctcgtcgccggggatgatgggcggcggcgga
ggtggcggaagtggcggcggaggtggcggtctagttcccggatcggccagccagcatcac
cgctcccgctcagccacccgtacgtcatcgaccaacgccaatcgatcgtaccactcgctg
gatcgcgacggtcacgaccgcgaacgtgaattcatgcctatccgggagacgagagacgga
cgggacggccgaggtggcggaggcgatatgagggatcgctccctggagcgcggaatggac
ggaatgggcggcggaggaggcagaggaggcagccggagagatcgctccatggatcgcaac
gccatgatggacgaagagatgctgtacggcggaggcggcggaagagatatggtcggaccg
ggcggtggaatgggcggatccggtttgccgctgccgagatcggcccgtcaatcgccggcc
gtcgacatgggcatgaaaggtggcaacagcaacatgatgggcaacgccggaagcggtgga
ggcggcctgaccaaccgcgaatcctacctgatggaaatgcaagggcagaacgcggacttg
tcgcgtgagctgggcacgctcaaacgggagctggagatgaccaatcaaaaactgggctcc
agtatgcacagcatcaagaccttctggtcacctgagctcaagaaggagcgggccctgcgc
aaagaagagtcggccaaatattcgctcatcaacgatcagctcaagttgttaaacgccgaa
aatcagaaacaagccatgctggtacgtcagctggaagaggaattgcgcatccggagcatg
cagaatcaccatcccagtcacgaggtccggcagcaggtggaaaccatgtacgccgagaat
gatcacctgtccagggaagtggccattctccgggagacggtcaaagaactggaattgagg
atcgaaacgcagaaacagacactccaatcgcgcgatgaaagcatcaagaaactcctggaa
atgctccagaacaagggcatgggtagtagcctgcttgttgcttcccccgatgtggccgag
ttcgaaagactcaggagccgtctgaacgagagccagacgcagacgcgctacctgcagtcc
atggtcaacatccgcgatcaggagctggatagggccaggaaggaatcggtgctgtggcaa
gacaagctcaagagtctcatccaagacccggcccatcgaggcgatcacgtgacggagact
tgggcggctctgctggagacgaaggagagccggatcgccgtgatggagagggacatcagc
ctgttggagaaggagctgctccagcagcagcagctgatgcagcagcagagagaccactgg
gtgcgctcaatcgaacaatccaatccgaccactcccgtcccaccgcggacggccactccg
tctcaacaggcggcggcagcagcggtggcggcggccgcccagctctaccgtcacagtccc
gtcaacaacggtcaaacagctcagcacaaagacgcgatcgaagagctccggatggaaatc
ggaaagcgggaccaagaactgctggcaatgggggccaagatgaagacgctggaggagcaa
caccaggactaccagcgtcacatagccgtactgaaggagagcctctgcgccaaggaagag
cactacaacatgctccaaacggatgtggaggaattgaggcagcggcatgaggagaagaac
cggatcatcgagaaaaagactcagatcgctttgcaggccacccaggagcggaaccgattc
acggccgaggtcaacgagatgcgcgatcatttggacatccgcgaccgcaagatcaacgtc
ttgcagcgcaagatcgagaatctcgaggacctgctgaaggagaaggacaaccaagtggac
atggcccgggctcgaatgacggcaatgcaggcgcaccactgttcgtcggagggcgccgtt
tcgtccctggaggaggccatcggcgacaaggagaagcagatcagccaattgcgtgagcag
agggaccgggccgagcaggagaagcacgaagagagggatctgcacgagcgggaaatcgcc
gagtacaagatgaagctgcacactctggagagcgaagtggagaaactcggggtgagactg
gatcgagccctggccgagaaggacaagctggaggccaagttggagagctcccagtcggag
ctgggcaagtcgaaagccgagctggatcgggtccagggcgacgccggcaagagctcggtc
gaatgggaatcggctaagcagcgcatttcgcgctacgaaatggagaacgagcggctcaag
tcggagaacgagcgtctgcgacacgatctcgaccgctccacatccactttcggccggacc
caattaaacgtcacgcaggaagccgagcggattcaagagaaactggacaaaactcaggcg
gaattgaggcgagcgctggccgaattgcggatgaaccagtcggagtgggagaggagccgt
gcggaggcggagcaattgcaggagaaagtcgagaaatcccagggcgaaatctaccgcctc
aaagccaaattggagaacgcccagtcggaaaaagaaaacctccaggaggagtacgagcgg
tgtcaaggcagcgtttcgcggctgcacgccgagcgcgacaaggccatctccgacgtggag
aaggttcgcgaagagctggaacgctgtcagagtacgctgggcaaattgcagctgcaacag
gagaagacccagcaagggtacgacaaggcccagaacgatgtcgatcgtctgcaggagcga
ctggacaaggccctggtcgagtctcgcaaattccagagcgagaaggagaaatacgtctac
gacttcgacaacatgcaggcccagttggacaaatcggcgggccagttgtcccgcgtccaa
aaggagaaggaaaacatccaacaagaaatggaacgaattcgggagaaacacgacaaaaac
caggcgttgacgatgcgattacaaaaggagcgcgatgtcgtcggtcaggaagcggagtcg
ctaagagagaaactggaacttgtccaatcgcaagtcgccaaggcgacgcgggatcgtgaa
ctcctcctcagcgagacggaatccagccgggagcgtttcgacaaagtgaatcagaatcta
ctcaaagtccagacggagagggatgatttgtcagcggaattgagcctgttgcgcgatcga
ctggacaaggcccaggccaacgccagcaaggccatggaggagcgagacagcgccgtcaag
gagacggagcggctgctggagaagtcggacaggagccagggtgaagtctaccggctccag
ggcaaactggacacgtccctggccgagcaggagagactgcgcagcgagagcgacaagacc
cagctcctggcgtccagggcccgcgaggatttccgcaaagcccacgaagagcttcaagac
gtcaaggagagcctggacagggccctgctccagctctccaagtccaaggagcacgaggag
aagctcaaggaggagctggagaagcactcggtcgacgtggagatgctgcgcgagcggcag
gagaagagccagagcgagtaccggcgagcctacagcgagaaggagaagctggagagcgag
ctggccagggttcaattcgagctggagcggacctcggcccagcactcgaaggcttacgcc
acgctggagaagacgcaggaagatttcgcccgcaagcaggtggaattggaaatgatctcg
gagaaatacgagcggctccaggtggagctgcgtcgcgtccagtcggaatgcgaccgctac
cggaccgagtgcgagacgcaaaaggaggaagtggaccggttcgccgcccgcattggcaag
taccaggatctgcaggagcggaccaaggaggagcaggacaagttggccgtcgaggccgaa
cgctacaaggatcgactggcccgcgtccagtccgacatggagaaactccaatcgcacaaa
gagaggacggaccaagagaacgcccggctcaaagtcgagctggaacggcaggcggagaac
gtcaagcaaacggtgtcggtgacgcggaatcaagcggcggccgagagcgcggccgaactg
gtccgtgtccagggcgagttgagccgatcgcagaacgaaatccagcggctgcaggtggag
ctgggccgggcccaggccgaatcggagcgtcaccgcgacaagtacgaggccggccagcag
gaagtgcagaggttgcggttgacttgcgagaagagcgacaaggagctggcccgcgtcacc
caggacatggagcgacggatcgctctgatgaccaagaccagcagcgaccaggatcgctgc
cagatggagatggatcgactccgcatcgaaatcgagaaagtcaaagacaagtacgaccgc
tcgcaggcggaagtggtgcggataacacagaagctggagcaggaggagcgagacaaggag
aaactcaaagtccaggtggctcagctcgagtcgcacaaggatcgagccatgggagccggg
cagaagcagtgcgaagagctgacggaacggaatcaaaaattgcagatggagtgcgagcgg
ctgagccaggagaaggagcgatccagcgttcaagtgcagcggctcaacttggagctggag
aaacatttgagcaagttccaggagaacagccaggcttccaagaaggagctggatcgattg
gtggaggagcgcgagaaattggccagggagatccagacgaccaagacggagaacgagcgg
ttgcgcgaagagctgcaccggctccaccgatccctcgagtccagccagggagccaaagag
gaggtgaccaagttgcagaaaatgatcgattccatgcaaaacgagctgggccggctcaac
gccgagcgcgagaagctgtcgtccaacatgtcgcaaaaggacaaacagtgggagaagatg
gagaagcagctggtcaagatggaagccgagctgaagaaagtctcaacggagcgggatcag
gtgatcgtccagctggagaagtcgcaggagatgctggtcacgttccagcacgagctccag
caatcggatcagggattagagaggaccaaacaggagaacgagagactcaagagggagcag
gagcgaatcctgcgcgacgtcgagcaaggatcgcgcgacgtgatgcaagccaaggagaaa
gagttccagcggctgcagagccacgtccagcagcaagaaaaagagctggccaagagccag
caggagatggccagagatcgacagcgagccgaaaaggctgagcgcgatttggcaaacgct
cagcggcagctgcaggagcgagccggccaactggaaggagccgcatcgcaagccggtcag
gccgtcgagatggaaagaaaaagagccgaacgggctgagcaggtcggcagggagctgcag
gagagttttgtccagcagaagaaactgtcggagcagcagcagcaacatctggcccagctt
cagcagcagatcggccagcagcagcagcaactagcggcccagcagcagcaactggcccag
cagcagcaacacctgcaaaaggctgccggcgaacagggagcggcggctgcggccgaagtg
cagaaactgcgcaaagagctgatgtccgcccagcaggaagctcaaaaagctttgggcgaa
cgcgaaagggcgtcggctcaagtggccaagacccagcaagagctgaagagcgccatagtt
gaaagggagcgacttcaatcgcagctggaaatgctcgtcaacgagttgagcaaccgacag
ttggagctgcaggaagccacgacagctcgtagtgacagcgaggaaaccaccaaattgagg
cggcaggttgaagagcagcggaagcaattggaagagctgcggaggtccagtgaccagcga
gccaagcagattgaggagcgtcagagggcgttggaggaagccgaacgtcaggccaaaaag
aggaaagaagcactcgaccagttggacgagaggctcaaacaacaacagaaaaacagtccg
gcagcagcggcagctggaggacctgccggcaagcagatcgccgaaaaggattcagagatc
aagcagctgaaagaggacagccagcgggctcagagcgagacggaaaggctcctgcagttg
atgcaaatgacgcaagaagagcagttcgccaaagacaagaccatcatggaattacaagag
gcgttaagagtggaacgatccaagcgtgcgcaagccagcgcggatgagcgaagcgcaaat
caagatcctcgaggccagaaccgatcacagacgacggaagagagcgaccaagggaattcg
tcggatgctttggtgcagaagcgagaggattggctgtctcaaaggaaggatgagctggaa
gacgtcattcaacagctggaggaagtgatccgcatcaaagagtttgccatcgatcgactg
acgaaagagctgggcgacgtacgagaccaatccgctttgctggaaggtcagcggacgagg
agtctggatcagaaagaagaccggatcgaagagctggaagaagctctcagggaaagtgtt
cgcatcacagctgatcgtgaagtggccctcgacgctgagactcaacagcggacgatcctc
gaccaaaaggtggggcggctagagcagcgattgcagtcgatgcataacgccaagagtttg
aaatgccgccagtgtcgaccgaaccggctgcgactccaggagctccagtcccggttgagt
caattgctgtcagaaaggagaggccacctccacgaactcttcgacatgaagcaagaagct
ttagaggctgccatcagcgaacgagacgcacagctcggcttgctcgaagtctccggcatc
aaaacagccagggctgcggaacgcgccgacgatttaagagccgatcggaagcgactgatg
caaatgatgaaacaacagaatgagaaacgagtcaaattgttactcgaatacgaagatgag
aatcttgccggcatcgacggtgacgatttccacgcaggagactctacggaagacagtgat
gatccggtatgcaaatga
DBGET
integrated database retrieval system