KEGG   Daphnia pulicaria: 124338053
Entry
124338053         CDS       T08670                                 
Name
(RefSeq) nucleoporin SEH1-like
  KO
K14299  nucleoporin SEH1
Organism
dpz  Daphnia pulicaria
Pathway
dpz03013  Nucleocytoplasmic transport
dpz04150  mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:dpz00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    124338053
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    124338053
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dpz03019]
    124338053
   04131 Membrane trafficking [BR:dpz04131]
    124338053
Messenger RNA biogenesis [BR:dpz03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     124338053
Membrane trafficking [BR:dpz04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    124338053
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_WDR5 Beta-prop_EML_2 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40_Prp19 Beta-prop_RIG_2nd WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_WDR3_2nd WDR55 Beta-prop_IFT140_1st WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_TEP1_2nd Beta-prop_WDR19_1st EIF3I Beta-prop_WDR35_TULP_N Ge1_WD40 Beta-prop_WDR36-Utp21_2nd
Other DBs
NCBI-GeneID: 124338053
NCBI-ProteinID: XP_046648049
LinkDB
Position
4:complement(19019826..19021515)
AA seq 363 aa
MFQARTINAEHKDLIHDVAYDFYGRRLATCSSDQSVKVFDLDENDEWRLTADWKTHAGSV
WKVNWAHPEFGQILATCSFDRTAAIWEEIVGESGNSTQSKNQSHWVKRTSLVDSRTNVTD
IKFAPKHMGLLLAMCSADGGVRIYEAPDIMNLSQWSLQQEITLKMPVSCLSWNPSFSRLH
PPMLAVGSDDTNVASGGKVFLFEYSESSHRWSKAETINTIVDPVHDIAFAPNLGRSYHIL
GIASKDVRIVILKPPQKDAYAAACPTSQLEILQAAQFDDHHSTVWRISWNITGTILASSG
DDGCLRMWKANYLQNWKCIAVLKGDGSGVSPEDGTDRDKTVSAATARYFKLGAISNPNQV
PWH
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgtttcaagcaagaacgataaatgctgaacacaaagacctgattcatgatgtagcttat
gatttttatgggcgtcgattggctacttgttcctccgaccagagtgttaaagtttttgac
ctggatgaaaatgatgaatggagattgactgctgattggaagactcatgctggttctgtt
tggaaagtaaattgggctcatcctgaatttggtcaaattttagccacttgctcatttgac
agaacagctgcaatttgggaagaaattgttggtgaatcagggaattcaacgcagagtaaa
aaccaaagtcattgggtgaaaaggacaagtttggtagattcaagaaccaatgtgactgac
atcaaatttgctccaaaacacatgggactattgttagctatgtgttcagctgatggagga
gttagaatatatgaagccccagacattatgaacctaagtcaatggagtttgcagcaagaa
ataacactgaaaatgcctgtgtcttgtctatcatggaatccgtcattttctcgtctccat
cctccaatgttggcagttggtagtgatgacacgaatgtcgcctctggtggaaaagtgttt
ctgtttgagtacagtgaaagctcccatcgctggtctaaagctgaaactatcaacacaata
gtcgacccagtgcatgacatagcatttgcacctaacttgggaagaagttaccacattcta
ggaattgcaagcaaagatgttagaatagttattcttaaaccacctcagaaagatgcttat
gcagcagcttgtccaacttcccagttggagatactgcaggcagcccaatttgatgaccat
cattctactgtttggagaatctcttggaacattactggaactattctagcttcttcagga
gatgacggctgtttaagaatgtggaaagccaactatttgcagaattggaaatgcattgcc
gtgttgaaaggtgatggatcgggtgtaagtccagaagacggaactgatcgtgataaaacc
gtttctgcagcaactgctcgttactttaaacttggcgcaatcagcaatccaaatcaagta
ccctggcactaa

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