Daphnia pulicaria: 124338100
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Entry
124338100 CDS
T08670
Name
(RefSeq) transcriptional regulator ATRX homolog isoform X1
KO
K10779
transcriptional regulator ATRX
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpz03000
]
124338100
03036 Chromosome and associated proteins [BR:
dpz03036
]
124338100
Transcription factors [BR:
dpz03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
124338100
Chromosome and associated proteins [BR:
dpz03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
124338100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
zf-RING_15
Motif
Other DBs
NCBI-GeneID:
124338100
NCBI-ProteinID:
XP_046648123
LinkDB
All DBs
Position
4:20299013..20306965
Genome browser
AA seq
1975 aa
AA seq
DB search
MTSSVEDFSIPDFGSAEQNEDMSEDCRLEKDSSNDVDMFEDSSAEEYVGATCGLKDNGKP
TASASKNSMAVTTGKSSVPFNQSSIIYDEETLMKMTDEELQFFENYKQANHAQMSSLKCT
TCSCQLFLVNRDNIRIHPVLGVLVCKSCREFYSNGPFTKDENGHDEYCRWCAEGGMIICC
DTCTNVFCKACLRRCLGRVNLLEITSSKCKWSCLVCNNLPLWSQRALCRMVMSAMKSTPG
RKSLSRRSVQDTNVSSDPSIWLPAIISEAEKLATYCKALASKVGVSWSKECEEADGSSCH
QQKDKVVNYCRKLRKAVVTTRLNMKLLEEKLVAKFEQNYGNTADIEVDQQESSILKQDST
PRAGKRLIVKIKNFREANSKQDYYAEVRESPPPHSATSNSTKDSPRKSICSLSSQATIPH
CPSPLPTEEQSGDNSSSNEAEAQPNAAEKTRLPTVEDTLANDESVEFFDTFSELTESKPT
EEDALQERQASLVEGDHKLSPEPFPVKFITTELNSHSPDMFANTPSDNDSDLEDSTKTVP
LDHILPKGEVSNVNNDKVVIKQEAKISTTPSPTAGSARGVGTPSLAATGNKSFKSKLSRS
TPTSKERTGTKVLPASNDEVIVNSTLRTSTPVTSQSSKSLKSSSSPEIDLNEKARLELLR
ESSDSDDSLAELKLSPRVKRTKKRRSIPLGLEDDPKLKAECAVVVNRITNLNEVLNGKES
EESMLKKQVDRLVKSPIKIAVNSSTSELDDSDPGGFEKEADKPKKQYSKIKKSETKPFRL
EDLDSSSSSSSEIEATEQVTGITKLPTTSSIPDRNEAVRLALLAASDSDSDLDLDTQETE
NIPDEAPKSAEEKIIIECDLAMETDDIGIIELKEEVIGLSTDDEGAVKGSNLKTDKLLRM
SIGDPDAESDTKKSQKGKEAKKEKKKTRERKKRRIQSDSDFQSSESEKEKKKRKRKRSSP
SDEVSDDDDSSKDGKSKSKSRRRIKRAAHTSDSENSNDSDIEVLNESQRSEAGGSKGRKN
IKKIMKDTNLKDETKAAAKEEEDRKRRIAERQKFYNEAFVGDMALINAQTHHLVLDFDPK
TKEELVTVDKHIVTKLKPHQVKGVKFMWDACFESIERLKEHPGSGCILAHCMGLGKSLQV
VTLVHTVLTNKACKVDRVLVVCPLSTVLNWVNEFNVWLPPNSDVEVYEMASAKGNSKDIR
KYTLQSWLEGGGVMIIGYDMYRNLTNENNKKITKKERDVFTRSLVDPGPQLVVCDEGHLL
KNEKTALSKAMNKIATRRRVVLTGTPLQNSLLEYHCMIQFVKPNLLGTSREFTNRFANPI
KNGQAADSTDSDVRVMKRRAHVLHKMLEDSVQRFDYAVLTPFLPPKHEYVVSVKLSELQI
KMYQYYLEYHAKGGPNHIGRGKGAGLFADFQELGRVWTHPKALLLAELNREAKAKNNSSD
SEGSIADFIDDRGETPVSDDDGGVVCLDESGDEKEAAAGTKSNNFRMRTRAARGDQPPPE
DELGVTTPMSSTWWSQFVQDEDMVKMEHSGKLILLMDILRQCELIGDKVLVFSQSLVSLN
LIEEFLAAEDEQNEKNRASLASTDLKQDPIGTWRFNHDYFRLDGQTSAELRKNACNAFNN
PSNLRSRLFLISTKAGGLGINLVAANRVIIFDASWNPSHDVQSIFRVYRFGQKKPCYIYR
FLAQGTMEEKIYDRQVTKLSLSCRVVDEQQIERHFNSADLNELYIFEPDSHLRRPTPLLP
KDRLLAELTIQRKDWIVTYHEHDSLLENKSEEELTEAERKAAWDDFENEKRGVNPMMGMM
MNEMPGFMSMPGMPEILGGLAGRSVAGIPLSSIAAMIYNSNPGINQDEFLGRLRLTVDQL
QNFSVQQAAAASAAAAAASAQSAALQQPGDAQRLLMQRQVAADQLKRQFGNTPQSPGLPG
PSGLGASAPPRSRGRPTIGPHQRTDLYGLAPVIYNSATGSNQPAGPSGSNSVPKT
NT seq
5928 nt
NT seq
+upstream
nt +downstream
nt
atgacctcatctgtcgaggatttcagcattcctgattttggttcggcagaacagaatgag
gacatgagtgaagactgcagattggagaaagattcttcaaatgatgttgatatgtttgaa
gactcttcagcggaagaatatgttggagccacctgtggtttgaaggataatggaaaacct
actgcctcagcttcaaaaaattccatggcagttaccactggaaaatcttcagttccattt
aatcaaagttcgattatctatgatgaagaaacactgatgaaaatgactgacgaagagctg
caattctttgagaattacaagcaggcaaatcatgctcagatgtcatcattgaagtgtacc
acttgttcgtgccagcttttccttgtcaatcgggataacatcagaatccacccagtttta
ggtgtactcgtgtgcaaaagttgtcgagaattttacagtaacggcccttttaccaaagat
gaaaacggacatgatgagtattgccgttggtgtgccgaaggcggaatgattatatgctgc
gatacctgcacgaatgtgttttgcaaggcatgcttaagacgttgcttaggacgtgtgaat
cttctagaaatcacaagcagtaagtgcaagtggagttgcttagtttgcaacaatcttccc
ctttggagtcaaagagcgctatgtagaatggtcatgtcagcgatgaaatcaactcctggt
cgaaagtctttgtcaaggcgatcagtgcaggacacgaatgtttcgagtgatccttccatt
tggttgccagccatcataagtgaagcagaaaagttggccacgtactgtaaggcactggca
tcaaaagtgggagtcagttggtctaaagaatgcgaagaagccgatggaagttcgtgtcac
caacagaaagacaaggtcgttaattactgccgtaaacttcgtaaagccgtcgtcacaact
cgcctaaatatgaagttactggaggagaagctggttgctaaatttgaacagaattatggc
aacaccgcagacatagaggtcgatcaacaggaatcatccatcttaaagcaggattcgact
ccaagagccggcaagcgacttatagtgaaaattaaaaactttagggaagcaaacagcaag
caagattactatgccgaagttcgggaatcgccacctccccattcggcaacttcaaattct
acgaaagattctcctcggaaatctatttgctctttgagcagtcaagcaactattccacat
tgcccaagtcccttaccaacagaagaacagtctggggacaacagctcatcaaatgaagct
gaagcacaacccaacgcagctgagaagacccgattgccaacagtggaagatactctcgca
aatgatgaatctgtcgaatttttcgatacgttctcagagcttactgaaagtaaaccgacc
gaagaagacgctctccaagaaaggcaagctagtttagttgaaggtgatcataagctgtct
ccggaaccatttccagtcaaatttataacgacagagttaaattcgcattcacccgatatg
ttcgctaacaccccatctgacaatgattccgatcttgaggattccacaaagacagttcca
ctcgatcatattttgccaaaaggtgaggtcagtaatgttaataatgacaaagtcgttatc
aaacaagaagcgaaaatttctactacaccatcccccactgccggctcagcaagaggtgta
ggcaccccgtctctcgcagcaacaggaaataaatcattcaaatctaaactctctagaagt
acaccaacctcaaaggaacgcaccggcacaaaagtcttgcctgcatcgaacgatgaagtc
attgtcaactcaacattgagaacctcaacaccagtgacaagtcagagctcgaaatctctc
aaatcgtcatcatcaccagaaatagatttgaatgaaaaggcaaggctagaacttttaagg
gaatcctccgattcagacgacagtctcgctgaattgaagctcagccctcgtgtaaagaga
acaaagaaaagaagaagcataccgctggggttagaggacgatcctaaattgaaagccgaa
tgcgccgtcgtcgtcaatcgcatcactaatttgaacgaagtgctaaacggaaaggaatcg
gaagaatcgatgctcaaaaaacaagtcgaccgcctagtgaaaagtccgataaaaattgca
gtaaatagctcgacttctgaattggatgattccgatccagggggctttgagaaagaggca
gataagcctaaaaaacagtactcaaagattaaaaaatctgaaacaaaaccttttcggctt
gaagatctggattcatcatcttcgtcctcctcagagattgaagcaactgagcaagtaact
ggaataaccaagttgccaacgacatcgtcgattcctgatcgcaacgaagccgttcgtcta
gctttgttagcagctagtgattcagattcagatttggatttggacacccaagaaactgag
aatattccagacgaagctccaaaatcagcagaagaaaaaataattatagaatgtgatttg
gcgatggaaaccgatgatattggaataattgagttaaaagaagaagtcatcggtctaagc
acagatgatgaaggtgctgtcaaaggctcgaatctcaaaactgataagctattgcgtatg
tcaattggtgatcccgatgccgaatctgacacgaagaaatcacagaaaggcaaggaagcc
aagaaagaaaaaaagaagactagagaaaggaagaagcggcgcattcaatcagactcagat
tttcaatcttcagaatcggaaaaagaaaagaagaagcggaagaggaagcgttcaagccca
tcggatgaagtttcggatgatgacgattctagcaaagatggaaaatctaaatccaaatca
cgtcgtcgaatcaagagagccgctcatacaagcgactccgagaactcaaacgattcagat
attgaggttctgaacgaatcccagcgatcggaagctggcggatcgaaaggcagaaaaaat
atcaaaaagatcatgaaagacacaaaccttaaggatgaaactaaagccgctgccaaagaa
gaagaagatcgcaaaaggcgtatagctgagcgtcaaaagttctacaatgaagcctttgtt
ggtgatatggcccttatcaatgcgcagacccaccacctggtcttagatttcgaccctaaa
accaaagaggagctcgttacggtggacaaacatatcgtcaccaaactgaagcctcatcag
gtcaagggtgtaaagttcatgtgggatgcttgcttcgaatccatcgagagactcaaggag
catcctggctctggatgtattttggcccattgcatgggtttgggtaaaagtcttcaagtc
gtcacgttggtgcacacggtccttacaaacaaagcatgcaaggttgatcgtgtgctagta
gtctgtcctcttagcacagtcctaaactgggtcaacgagtttaacgtatggcttccgcca
aattcagatgttgaagtgtacgaaatggcaagcgccaagggtaatagtaaagatatccga
aagtacacgctacagagttggctggaaggtggaggggtcatgatcattggttacgatatg
tatcgcaacctaactaacgagaacaacaaaaaaatcacaaaaaaagagcgcgacgtgttc
acacgctctctagtggatcctgggccgcaactcgttgtatgcgatgagggccatttactg
aaaaatgagaagacagctctgtccaaggcaatgaacaagatcgctactagaagaagagta
gtcttgacaggcactccgctccagaatagcttgctagaatatcactgcatgattcagttc
gtcaaacctaatctactgggaacatctagggaattcacgaatcgatttgccaatcccatt
aaaaacggacaggctgccgactcgactgactctgacgtacgggttatgaaacgacgagcc
cacgtattgcacaaaatgctcgaagattccgtgcaacgattcgattacgccgttctgact
ccattcttgcctcctaagcacgaatacgtcgtgtcagtgaagttgtcggaactacagatc
aagatgtaccagtattacctggagtatcacgccaagggtggtccgaatcatatcggtcgc
ggaaaaggagctggactctttgccgatttccaggaattggggcgagtttggacgcatccc
aaagcgttgctgttggcagaacttaatcgtgaagctaaagcaaaaaacaacagcagtgat
tccgaaggttcaatagcggatttcattgacgaccgaggagaaacacccgtaagcgacgat
gacggcggcgttgtttgtttggatgaaagtggcgatgaaaaagaagccgcggcaggaact
aaatcaaacaactttagaatgagaacgcgtgctgcccgtggagatcagcctccgccagaa
gatgaattaggcgtgactactccaatgtctagcacctggtggtcacaattcgtccaagac
gaggacatggtcaaaatggaacacagtggcaagctcatacttctcatggatattcttcgt
cagtgcgagctcattggtgataaggtcctggttttcagccagtcccttgtttcgttaaat
ttgatcgaggaattcctcgcagccgaggacgagcaaaatgagaagaatcgggcgagtttg
gcaagcaccgatttaaaacaggatcctattgggacatggcgtttcaatcacgactacttc
cgattagatggacagacatcagcggagctgcgtaaaaacgcatgcaatgctttcaacaat
ccctccaatcttcgttctcgactgtttcttatttcaactaaagccggtggcttgggaatc
aatctggttgcagcgaatcgtgtcataatttttgacgcctcgtggaatccctcgcacgac
gtgcaaagtattttccgcgtttatcggtttgggcaaaagaaaccttgctatatttatcgt
tttctggctcaaggcaccatggaggagaaaatttacgatcgccaggttacgaaactatca
ttatcgtgccgagttgtcgatgagcaacaaatcgaacgccatttcaactcagcggatctt
aacgagttatatatcttcgaacctgatagccatttacgtcgaccgactccccttctaccg
aaagatcgtcttctggctgagctcactatccaaagaaaggactggatcgttacttaccac
gaacatgactcgcttctcgaaaacaagtccgaagaagaactgacggaagccgagcgcaaa
gccgcttgggatgactttgaaaatgagaaacgcggcgtaaaccctatgatgggcatgatg
atgaatgaaatgcctggttttatgagtatgcctggaatgccagaaattttaggaggactc
gccggacgatcggttgctggtattccactgagtagcatagcggctatgatctacaactct
aatcctgggattaatcaggacgagttccttggaaggcttcgattgacagttgatcaactt
caaaacttttctgtccagcaagcagctgccgcttcagccgccgcagccgctgcttccgct
cagtctgcagcattacagcaacccggtgatgctcaaagattactcatgcagcgccaagta
gctgctgaccagctcaaacgccaatttggtaatactccgcaatcaccaggcttaccagga
cccagtggtttaggcgcatcagctccaccaagatctcgcgggaggcctacaataggccca
caccagcgaacagatttgtatggactggcccctgttatttacaactctgctacaggatcg
aatcaaccagcaggaccgagtggatctaattctgtacctaaaacgtaa
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