Daphnia pulicaria: 124338301
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Entry
124338301 CDS
T08670
Name
(RefSeq) pre-mRNA-splicing factor 38B-like
KO
K12850
pre-mRNA-splicing factor 38B
Organism
dpz
Daphnia pulicaria
Pathway
dpz03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124338301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dpz03041
]
124338301
Spliceosome [BR:
dpz03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
124338301
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Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
124338301
NCBI-ProteinID:
XP_046648393
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All DBs
Position
4:complement(15638017..15640177)
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AA seq
336 aa
AA seq
DB search
MASSNDEESDSEYVHPRGVPHFPGHERRSNTLPIWGNERTMNLNPLILTNIQTSHYFKTN
LSELKTYHEVVDEIYYKVQHLEPWEKGSRKTSGQTGMCGGVRGVGAGGIVSTPYCLLYKL
FTLKLTRKQLIGLITHCDSPYIRGLGFMHIRYTQPPADLFGWFQPYLEDEEEIDPKAGGG
HPMTIGTMVRQLLTKLDWYDSLFPRIPVPIQINIDRELAKSFPPVQQQRVAQQPELPAAT
GRDQRDWRREERPSRSPPPRRDNVRSRSRSRERERIRDRSRERDRDSRYRSSRDRDRERR
DRDRGSDRDSKKQKSSSRHRSRSRDRDQRRRRDDRR
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcaagtaatgacgaagaatctgattcggaatacgtccatccaagaggagtacct
cattttccaggacatgagagacggtccaacacattgccgatatgggggaatgaaaggact
atgaatttgaaccccctcatcctaacaaacattcaaacgtcacactacttcaaaacaaac
ctatctgaattgaagacataccatgaagtggttgacgaaatttactacaaagttcaacat
ttagagccatgggagaaaggtagtagaaaaacctctgggcaaactggaatgtgtggtggg
gttcgtggagttggtgctggtggaattgtttctacaccttattgcctgttgtacaagctt
tttactttaaagttaacaaggaagcaacttataggattgatcactcactgtgactctcct
tacattcggggattgggtttcatgcacatcaggtacacgcaacctcctgctgatctcttt
ggttggtttcagccttatttggaagatgaagaggaaatcgatccgaaagcgggcggtggt
catccaatgactataggaacgatggtccgtcaattgctcacaaaactggactggtatgat
agcctctttcctcgaattcccgtgcctattcagattaacatcgatcgtgaattggccaaa
agttttcctcccgtccaacagcagagagttgcccaacaaccagaacttcctgccgcaacg
ggcagggatcaacgtgattggcgccgtgaagaacgtccctcccgttcgcctccacctcga
agggataacgtgcgttcacgctcgagatcacgggaaagggaaagaattcgtgatcgcagt
cgagaaagagatcgagatagcaggtatcgctcaagtcgtgatcgtgatcgggagcgccga
gatcgcgatcgtggctcggacagagacagcaagaagcagaaatcatcgagccgacatcga
agtcgaagccgagatcgagatcaacgaagacgacgtgacgatcggcgctaa
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