Daphnia pulicaria: 124338460
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Entry
124338460 CDS
T08670
Name
(RefSeq) TATA-binding protein-associated factor 172-like
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpz03021
]
124338460
Transcription machinery [BR:
dpz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
124338460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
Helicase_C
HEAT
HEAT_EF3_N
TPR_Trm732_C
TOR1L1_N
HEAT_2
HEAT_EZ
Vac14_Fab1_bd
mTOR_dom
Motif
Other DBs
NCBI-GeneID:
124338460
NCBI-ProteinID:
XP_046648493
LinkDB
All DBs
Position
4:21329788..21337305
Genome browser
AA seq
1792 aa
AA seq
DB search
METRLDRLFLLLDTGSSSVTRKAAAQQLGEVQRLHPHELPLLLKKIFVHLKSPSWDTRIA
ASQAINSVISHVPQWDPLPLIVKSENDTNLPSGKLSQLKFNTFSIGTVLANRHFLTASEG
KEFDDDDFSSADPKERLARQRKALNDSLGLELAAKLGIDTGEIVSAEDLTGQQEPTVNVS
DISPATPIDDEAERLNKQLSSREANRAKRKARQGGKQKSIDGSPSDGASSSKKIKKEREE
EIIVESVPDPAGTWPDTAQNWPFESFCDLLVTKLLSPSWEVRHGGGTALREVIQLHGRGA
GRTVHQTMSEMKVAHGNWLEDTALRLLCVLALDRFGDFISDQVIAPVRETTAQALGSLAK
LMEPQQVESVVAVLLQLLQQTEWETRHGGLLGLKYLMAARQDLSQQLLPLVYPSLFRGLE
DEVDDVSAVAAAALVPLADPLVNLLHLNEIGNLLKTLWDSLLELDELTASTSCILTLLSS
LMARSETVPCLQHLPLVDLVPRLWPFLSHSSSKVRRSTLKTLETLLIPTHTAEWMDGLAS
DLLRHIFQRAMLEHQQETINHIEELWGLLIRRLPLQVLLPAACPCVAPWLCMMMQPSRLP
FDPTILIFPPVRKEPIESRRRSTSGPLGEVAPVETKYFIAGTDHVYENPLQREKAVIRAR
CLAASMLGFLSKYLVQVMPGLTYSADMESPVECYAKLLLVHLNSRSAIQRTAVAMVMADW
GERCTEISPPSVLIERLHVTLTETVYYDEIGVAYARLLHDTKDFIATLRHYKVDIESVFP
SANANFLPIEQIQSLAGPIATQLLTSSKLKSKITEMLEDRRKSLASGSLQVSIDQSNLNN
TTQSALARAVVGFRVLPVNTVNPVVKPLMDSIKMEENEQLQKSSAQTLARLLELCQARTP
SPNVKILKNICIFLCADTELTPKVSPDDLDGILMLMQQQRLAEKTAGGKRTQVDSDPAGT
RAIEIQRRGAAHALKSLASYFGPDMTKKVPYLWDSIMSIQTIESHSENDAVGILKAEDLI
QCLQILEVIASSLHSSLHAQILELLPTFCDLLEHQLRAVRHMASRGLAALGAVDGDRVLT
VVVEKVIPMLGAIDRERMREGAIEAVACLVEQMGMNIIPFIVLLVIPVLGRMSDTNQSVR
LVATQSFATLIRLMPLEGGVPDPPALSPELAEKKVQQRRFLEQLFDPKKLENYKIPITIN
AELRSYQQDGVNWLAFLNKYGLHGILCDDMGLGKTLQTICIIASDHHQRKADFELTQNPS
SASLPSIVICPPTLTGHWMDEVEKFVSADILNPLHYTGPPSERMRLRSRAVHHNLIIASY
DIVRNDLDFFSSVRWNFCVLDEGHVIKNGKTKLSKAIKQLIANHRLILSGTPIQNNVLEL
WSLFDFLIPGFLGSEKQFQARYSKPILASRDAKASSKEQENGVLAMESLHRQTLPFLLRR
MKEDVLKDLPPKITQDYYCDLSPLQVKLYEDFSKKHAELNQTSQASASSPAHAHIFQALQ
YLRKVCNHPKLVLTPQHPQFEAFQQHLKDQKSNLSDLQHASKLLALKQLLLDCGIGLDTA
NGSIDSSDTGGSVVSIHRALIFCQLRSMIDIIENDLLKTHMKTVSYLRLDGSIVAGARQG
VVKRFNEDPSIDVLLLTTQVGGLGLNLTGADTVIFVEHDWNPMKDLQAMDRAHRIGQKKV
VNVYRLITRGTLEEKIMGLQKFKLQTANTIISTENASLQSMGTEQLLDIFTLDDGKSSKS
NKRSSTNEPENASGLPAGFRVALESLPELWSEENYENEYNLDSFISTLNQIK
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaagattggacaggcttttcctactgctagatacaggatcatcttctgtcact
agaaaagctgctgcccaacaattgggtgaagttcaacgtttacatcctcatgagctacct
ctgttactcaagaaaatatttgtacatctgaagagtccttcttgggatactcgaattgct
gcctctcaagccattaattctgtgatttctcatgttccccaatgggaccctcttccactc
attgtcaaaagtgagaatgacaccaacttgccaagtggaaaacttagccagctgaaattt
aacacatttagtattggcacagttttagcaaaccgtcattttttaacagcatcagagggc
aaagaatttgatgatgatgacttttcatcagctgatcccaaagaaaggttagctcgtcag
cgtaaagcactaaatgacagccttggtcttgagctggcagccaaattaggcattgatact
ggagaaattgtctctgctgaagatttaactggacagcaagaaccaactgttaatgtttca
gacatctcacctgccacaccaatagatgacgaagctgaaagattgaataagcaactcagt
tctagagaagcaaacagagcaaaacgaaaagcacgacagggaggaaaacaaaagtcaatc
gacgggagcccatctgacggagcctctagtagtaaaaaaattaagaaagaaagggaggaa
gaaattatagtggaaagcgtgcccgatcctgctggaacatggccggatactgctcaaaac
tggccttttgaaagcttctgtgatcttctagtgactaagcttcttagtcctagttgggag
gttcggcatggagggggtacagctttgcgtgaagtaattcaactacatggtcgtggcgca
ggacgaactgttcatcagacgatgtccgaaatgaaagtagctcatggcaattggcttgaa
gatacagctctgcgtctcttgtgcgtcttggcattagatcgttttggcgacttcatatcg
gaccaagttattgcgcccgttcgggaaacaacagcacaggcacttggttcgttagccaag
ttgatggaacctcagcaggttgaatcggtcgttgctgttctgcttcagttacttcagcaa
actgaatgggagacacggcatggcggccttttgggcttgaaatatttgatggcggctcga
caggatctatctcaacagctcttaccgttggtgtatcccagcctctttcgaggcctcgaa
gatgaagtcgacgatgtcagcgctgtggctgcagcggccttggtacctctggctgaccct
ctagtcaatcttttgcacctgaatgagataggcaatttgctcaaaacgctgtgggactct
ctacttgaacttgatgagttgacagcatcgacaagctgcattctcactcttctgtcatcg
ttaatggcccgctcggaaacagtcccatgtttgcagcatctgcctttagttgatttagtt
ccaagattatggccatttctttctcactcctcttccaaagtccgacgttccactttaaag
acactagagacattactgattccaacccatactgctgaatggatggatgggttagcttct
gatctcctccgccatattttccagcgtgcgatgcttgaacaccagcaagaaaccatcaac
cacattgaggagctatggggtctgctcataagacgacttccgcttcaggtgttgcttccc
gctgcttgcccttgcgtggccccttggctttgcatgatgatgcagccttcacgtctgcct
tttgacccaacgattctaatatttccacccgttcgtaaagaaccaattgaaagtcgccgt
cggagcaccagcggacctcttggagaagtagctccagtcgaaacaaaatacttcatcgca
ggaacagaccatgtttatgagaatccacttcaacgtgaaaaggcagtaatccgagcgcgt
tgtttggctgcttctatgttgggctttctcagcaaatacctcgttcaggtaatgcctggg
ttgacttattcagctgacatggagtcgccagttgaatgctacgcaaaactattactagtt
catttgaacagccgttcggccatccagcgtacagcggttgcaatggttatggctgattgg
ggtgaaaggtgtacggaaatttctccgccaagtgttttgatagaacgtcttcacgtaact
ttgactgaaaccgtgtattacgatgagattggcgtcgcttatgctcgactgctgcacgac
accaaagacttcatcgcaacgcttaggcattataaagtggacatagaatctgtattcccc
tctgccaacgctaatttcttaccgatagaacaaatccaatcactagctggcccaatcgca
actcaactcttaactagctccaaacttaagagtaaaataactgaaatgctggaagacaga
agaaaatcgttggcgagtggcagccttcaggtgtcgatcgatcaaagtaatctaaacaac
actactcaatcggcattagcgcgagccgtggttggcttccgagttctacctgttaacaca
gtaaatcccgtcgttaagcctttgatggattcaatcaaaatggaggaaaatgaacagcta
cagaaatcttccgcgcaaacattggcgcgcttattagaactctgccaggcacgaaccccc
agtcccaatgtcaaaattttgaagaacatttgcattttcctttgtgctgataccgaactg
acgccaaaagtaagtccagatgatttggacggaatcttaatgttgatgcaacagcagcga
ttagctgagaaaactgccggaggaaaacgaacccaagtggatagtgacccagctggcacc
cgtgccatagaaattcaacgacgaggagctgcacacgcattaaagtctttggcttcctac
ttcggtccagatatgacaaagaaagtgccatatctttgggactccataatgagcattcaa
actattgaaagtcattctgaaaacgatgctgtcggaatcttgaaagcggaagatttaatc
cagtgcttgcagatcctagaagtcatagcgtcttcccttcattcttccctacatgctcaa
attttggaattgctgccaacattttgtgatcttttagaacatcagttaagggcagtgcga
catatggcaagtcgaggactagctgctcttggagccgttgatggcgaccgtgttctcaca
gttgtggttgagaaagttatacctatgcttggagcgattgatcgtgaacgaatgcgagag
ggagcaatcgaagccgtggcctgtttggttgaacaaatgggcatgaacataattcctttc
atcgtcctcttggtcattcctgttctcggccgaatgagcgatactaaccagtccgtcaga
ttggtggcaactcaatcatttgctactttgattagacttatgcctcttgaaggaggcgtt
ccggatccaccagctctcagtccagagttggcagaaaagaaagtacaacaacgtcgcttt
ctcgaacaattatttgaccccaaaaaactggagaactataagattcctatcaccataaat
gcagagctgcgctcctaccaacaggatggtgtgaattggttagctttcctaaacaaatat
gggttacatggcattctttgcgacgacatgggactcggcaagactctccaaacgatttgc
atcattgcttctgatcaccatcaacggaaggctgactttgaactcactcaaaacccatca
tcggcgagtttaccttcaattgtaatttgccctcctactctaacgggccattggatggac
gaggtggagaagtttgtttcagctgacattttgaatccgctgcactacaccggtccccca
tctgaaagaatgcgtctccgcagtagagcagttcatcataatctcatcatcgcttcttat
gacattgtccgaaacgacttggactttttcagttctgtacgttggaatttctgcgtttta
gatgaaggccacgtcataaagaacgggaaaaccaaattgtcaaaggccatcaaacaattg
attgcgaatcatcgattgatactatcgggtacaccaatccagaacaatgtactcgaactt
tggtctctctttgacttcttgattcctggtttccttggaagtgaaaaacagtttcaggct
cgttatagtaaaccgatcttggctagtcgcgatgctaaagcgtcttcgaaagaacaagag
aatggagtgctagccatggaatcactgcatcgccagacactaccgttccttctcagacga
atgaaagaagacgtactcaaggatctccctcccaaaattactcaagattactactgcgat
ttaagtccattgcaagtaaaactatatgaagatttctcaaagaaacatgcagaactcaat
cagaccagtcaggcctcagcttcctcccctgcacacgcgcatattttccaggcgctgcaa
taccttcgcaaagtttgcaaccatcccaagcttgttctaacaccccaacacccacagttt
gaagctttccagcagcatcttaaggatcaaaaaagcaatctctctgatttgcaacacgct
agcaaattattggctttgaaacaactgttgcttgactgtggcattggtttggatactgca
aacggatctatagattcttccgacacgggtggcagtgtggtttccattcacagagcgctg
attttctgtcaactccggtccatgattgacataattgagaacgacttacttaaaactcac
atgaaaactgtgtcttaccttcgtctagacggaagcattgttgccggtgcccgacaagga
gtagtcaaacgtttcaacgaagatccttccatcgatgtacttctactgactactcaagtc
ggtgggttaggtcttaatctcacaggagccgacacagtaatttttgtcgaacacgactgg
aatcctatgaaggatctccaagccatggatcgtgcgcacagaatcggtcaaaagaaagtg
gtcaacgtctaccgtctcatcaccagaggaactcttgaagaaaaaatcatgggattgcag
aagttcaaattacagaccgctaataccatcatcagcacggaaaatgcgagtcttcagtca
atgggaacggaacagttacttgatattttcacactggatgatggcaaatcgtccaagagt
aataaacggtcttcgactaatgagccggaaaatgcctccggtcttccggctggcttccgt
gtggcattggaatctttacccgagttgtggagcgaagaaaattacgaaaacgagtacaac
ctcgattcttttatttccaccttgaatcaaattaagtaa
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integrated database retrieval system
