KEGG   Daphnia pulicaria: 124338536
Entry
124338536         CDS       T08670                                 
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC1
  KO
K03013  DNA-directed RNA polymerases I, II, and III subunit RPABC1
Organism
dpz  Daphnia pulicaria
Pathway
dpz03020  RNA polymerase
dpz03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dpz00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    124338536
  09124 Replication and repair
   03420 Nucleotide excision repair
    124338536
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dpz03021]
    124338536
   03400 DNA repair and recombination proteins [BR:dpz03400]
    124338536
Transcription machinery [BR:dpz03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     124338536
  RNA polymerase III system
   RNA polymerase III
     124338536
  RNA polymerase I system
   RNA polymerase I
     124338536
DNA repair and recombination proteins [BR:dpz03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      124338536
SSDB
Motif
Pfam: RNA_pol_Rpb5_C RNA_pol_Rpb5_N NA-iREase1 Mrr_cat
Other DBs
NCBI-GeneID: 124338536
NCBI-ProteinID: XP_046648585
LinkDB
Position
4:complement(21340204..21341355)
AA seq 210 aa
MDDESETYRMWRVRKTIMQLCHDRGYLVTQDELDQTLEQFKIQFGDKPSERKPARSDLIV
LVAHNDDPTDQMFVFFPDEPKIGIKTIKTYCQRMQEENITRAIIVVQSGMTPSAKQSLTD
MAPKYILEYFTESELLINITEHELVPEHVVLTPEEKQELLGRYKLKENQLMRIQMGDPVA
RYFGLKRGQVVKIVRPSETAGRYISYRLVC
NT seq 633 nt   +upstreamnt  +downstreamnt
atggatgatgaatcggaaacctaccgaatgtggagagttcggaagactatcatgcagctt
tgccacgatagagggtatttagttactcaagatgagttggatcaaactttggaacaattt
aaaattcagtttggagataaaccaagtgaacggaagccagctcgcagtgatcttattgtt
ttggttgcacacaatgatgaccctactgaccaaatgtttgtttttttccctgatgagcct
aaaattggaatcaaaaccatcaaaacttactgccagcgaatgcaagaggaaaatataaca
agggccatcattgttgtacaatcaggcatgacaccatctgctaaacaatccttaacggat
atggcaccaaaatatatcttggaatatttcactgagtctgaactccttatcaacattact
gagcatgaattagtcccagaacatgttgttctcactccagaggaaaaacaagaacttcta
ggtcgttataaactgaaagaaaatcaactgatgcgaattcaaatgggggaccccgttgcg
cggtattttggacttaaaagaggacaggttgtgaaaatcgttcgacctagtgaaactgca
gggcgctacatttcctatcgtcttgtctgttga

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