Daphnia pulicaria: 124338896
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Entry
124338896 CDS
T08670
Name
(RefSeq) replication factor C subunit 5-like
KO
K10756
replication factor C subunit 3/5
Organism
dpz
Daphnia pulicaria
Pathway
dpz03030
DNA replication
dpz03410
Base excision repair
dpz03420
Nucleotide excision repair
dpz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124338896
03410 Base excision repair
124338896
03420 Nucleotide excision repair
124338896
03430 Mismatch repair
124338896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpz03032
]
124338896
03036 Chromosome and associated proteins [BR:
dpz03036
]
124338896
03400 DNA repair and recombination proteins [BR:
dpz03400
]
124338896
DNA replication proteins [BR:
dpz03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
124338896
DNA Replication Termination Factors
ELG1-RFC complex
124338896
Chromosome and associated proteins [BR:
dpz03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
124338896
DNA repair and recombination proteins [BR:
dpz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
124338896
Check point factors
HRAD17(Rad24)-RFC complex
124338896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
AAA_14
RuvB_N
AAA_22
AAA_11
ResIII
AAA_24
AAA_assoc_2
AAA_16
DUF815
DEAD
AAA_30
AAA_7
AAA_5
AAA_19
TIP49
TniB
ATPase_2
PhoH
AAA_3
Mg_chelatase
RCF1-5-like_lid
nSTAND3
BrkDBD
Thioredoxin_6
Viral_helicase1
AAA_2
Motif
Other DBs
NCBI-GeneID:
124338896
NCBI-ProteinID:
XP_046648806
LinkDB
All DBs
Position
1:complement(21057207..21059365)
Genome browser
AA seq
330 aa
AA seq
DB search
MTSSGNLPWVEKYRPKQLDDLISHQDIISTIRKFINENRLPHLLFYGPPGTGKTSTILAC
AKELYTPQQFNSMVLELNASDDRGINVVRNQIMSFASTRSIFKSGFKLIILDEADAMTND
AQNALRRVIEKFTENVRFCLICNYMSKIIPAIQSRCTRFRFGPLKSDQILPRMNYVIEEE
KIKVTEDGRQALLSLAHGDMRRVINILQSTSMAFDEVNEDHVYTCVGHPLKSDIANVVSW
MLNEDLTSAYSKIRDLQTFKGLALQDILTETHLYVHKIEFPPNVRVFLLEKMADVEYRLS
AGCSEKLQLGSLLAAFDSIKYLIAKEVSVN
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgacttcctcgggaaatctgccgtgggtggaaaaatatcgaccaaaacagttggatgac
ttgatttctcaccaagatatcatttcaacaattcgcaagttcataaatgaaaatcgatta
cctcatttacttttttatggacctcctggaactggaaaaacaagcaccattcttgcatgc
gccaaagaactgtatacaccccagcaattcaattccatggttcttgaactaaatgcttct
gatgaccgaggcatcaatgttgtaagaaatcagatcatgagttttgctagcacaagatca
atattcaaatcaggcttcaaacttattatcttggatgaagctgatgctatgactaatgat
gctcaaaatgctcttagaagagtaattgaaaagtttactgaaaatgttcggttttgtctc
atctgtaattacatgagtaagatcataccagctatccagtcacgctgcactcgtttccga
ttcggcccattaaaatcagatcaaattttacctcggatgaattacgtaattgaagaagaa
aaaattaaggtcacggaagatgggcgtcaagctttgttgagcttagctcatggcgacatg
cgtcgtgtcataaatattcttcaaagcacctcaatggcttttgatgaagtgaatgaagat
catgtttacacttgcgtcggtcatcctcttaaatcggatattgcaaatgttgtttcgtgg
atgttaaacgaagatttaacttcagcttatagtaaaatacgcgatcttcaaactttcaaa
ggcctcgctttgcaagatatcttaactgaaacgcacttatacgttcacaaaatcgaattt
ccgccgaacgtccgagtctttttactggagaagatggctgatgttgaatatcgtttgtct
gcggggtgctctgaaaaattacaactcggatccttgcttgctgcctttgattcaattaaa
tatttaattgctaaagaagtgtcagtaaattaa
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integrated database retrieval system
