Daphnia pulicaria: 124339462
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Entry
124339462 CDS
T08670
Name
(RefSeq) WD repeat-containing protein 75-like
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
dpz
Daphnia pulicaria
Pathway
dpz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124339462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpz03009
]
124339462
Ribosome biogenesis [BR:
dpz03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
124339462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR75_2nd
Beta-prop_WDR75_1st
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML
WD40
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
PEP5_VPS11_N
Motif
Other DBs
NCBI-GeneID:
124339462
NCBI-ProteinID:
XP_046648836
LinkDB
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Position
1:complement(27681423..27684662)
Genome browser
AA seq
828 aa
AA seq
DB search
MANKKTRGPDKAKTNTDNIVVKKQEDAPDIVKQPPVFTDDSRYLCIASGRQVGIYSIQSG
DKVHCLKKHSFDIIGLGIKEENVLYSCDISGDVIEWDIKDGKLLKKTSVAVDGMKKFCAF
YYPGNGMFLLSTPAKNANGSSLWIVNSTSEREIFSEDIRKEPQSVAFGCDQGNGSLVIGA
LNYQCNGVLVKDMNSGAEKKHMTDKRKFTCIALHKEKLIMATGDISGRILLWHDFVNQIR
PVKTVYHWHTLAVSSVCFSSEGEYLYSGGSEKVMVKWRLEGKHRQFLPRMGSTIKFIVNA
PDNICVATSHSDNAIRIIDSTNKINQAIFGGLIKHDPIRGLEDGESKKESVMPTGLVFDP
RTQGIFFNAQAGFLQLFDPLRGSMIFNMDIANRNVLTDERNTIIGNAEVLRVAVSPTGEW
LATLEVWSNMSAGYHDMNLKFWRYDAVQANYELNTDVTMPHHDRITSLAFQPGLLGTEYP
CLVSIGRDLKFKIWRLVDDTDIYRQKESWTCDVAGDFRKMMPTAASFSEDGSLLAIAFQD
TVTLWDPMTINLNTTLSHNLIEESIELMEFGRDQCFRYLVCASKSSLFAWDVISKGLVWK
VGKLRSPIRCLVPDPKSSYMAVVLQNSEVFVFAPSSSKPVHTITNVKSSEPIAALFVPRP
NPLANSPEWLVNSRLLIVDDQQEFYSVDDNSVCGFDEKLTTPISHIDSLPWTPFSAIKAQ
KQISAAKQIVPVIHQTNGIKGYKSVQSLLETSTSTLPPMSRICNSFMIDLMIKHDPKLMT
VKADSENGATNDLPTLMNGHIESKMPALKEEATQQKLLTLDCQWITKN
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggcgaataagaaaacacgtggtccggataaagctaaaactaatacagacaatattgtt
gttaaaaaacaagaagatgcacccgacattgttaaacaacctccggtttttaccgacgat
tcaaggtatttatgcatcgcgtctggccgccaagtaggaatttacagcatccaatcggga
gataaagtgcattgtttaaaaaaacatagttttgatatcattggtttgggtatcaaagag
gagaatgttctctactcgtgtgacatctctggagacgttattgaatgggatataaaagac
ggaaaactactgaagaaaacttcagttgcagttgatggcatgaaaaaattctgtgctttt
tactatccaggaaatggcatgtttctgttatcaactccagcaaaaaatgccaacggttcc
tctctttggattgtcaatagcacaagtgaaagggaaatattctctgaagatattagaaaa
gaaccacagtctgttgcatttggctgtgatcaaggaaatggatcactggttataggggcc
ttgaattaccaatgtaatggtgtgttggtcaaagacatgaatagtggagctgagaaaaag
cacatgacagacaagagaaagttcacttgtattgctttgcacaaggaaaaacttataatg
gccacaggagatatctccggccgtattcttctttggcatgactttgttaatcagatcaga
ccagtgaagactgtgtaccattggcacacacttgctgtttcctcggtctgtttttctagt
gaaggtgaatacctttacagtggaggatctgagaaagtaatggtcaagtggcgacttgaa
ggcaaacacagacagtttcttccacgtatgggctcaacaatcaaattcattgtgaacgct
cctgataacatctgcgtcgccacatctcattccgacaatgctatacgtataattgattcg
accaacaaaatcaatcaggccatttttggtgggttaatcaaacacgatccgatccgtggt
cttgaagatggtgaatcaaagaaagaatcggtgatgcctactggtttggtttttgatcca
cgaacccaaggaattttcttcaatgcacaagctggattcctccagctttttgatcctctg
agaggttccatgattttcaatatggacattgccaatcgcaacgttctgactgacgaacga
aacaccatcatcggtaacgccgaagtgttgcgagttgctgtgtcacccacaggtgagtgg
ttagcaacactggaagtttggtcgaacatgtctgcaggctatcatgacatgaacttaaag
ttttggcgatacgacgctgtgcaagccaactacgaactcaacacggacgtaactatgcca
caccacgatcggatcacctccctggccttccaaccgggactgctgggcacagagtaccct
tgcctcgtatctatcggccgcgatcttaaatttaaaatttggcggttagtcgacgacacg
gacatttaccgtcagaaggaatcgtggacttgcgacgttgcaggagacttccgtaaaatg
atgccaaccgctgcatccttttcggaagacggctcgttactggccattgcttttcaagac
actgttactttatgggatccaatgaccatcaacctcaacacgactttaagccataacctt
attgaagaatctattgagctgatggaattcggaagagatcaatgctttcgctatctcgtt
tgtgcttcaaaatcatccctcttcgcatgggatgtaattagtaaaggactagtttggaaa
gtagggaaattgcgtagccctatcaggtgtttggtgcctgatcccaagtccagctatatg
gcagtggtcttgcaaaacagtgaagtgttcgtgttcgcaccttcgagttcgaaaccggta
catactataacgaacgtgaagagttcagaacctattgcggctctttttgttccccgaccg
aatcctctggcaaacagcccagaatggctagtaaattcacggcttttgattgttgatgat
caacaagaattttacagtgtggatgacaattccgtctgtggttttgacgagaagttgact
accccaatttctcacattgacagtttaccttggactcctttctcagccatcaaagcacag
aagcagatctcggcagccaagcagatagttccggtcatccatcaaactaacggcatcaag
ggatataaatcagttcaatcgctattggagacgtcaacttccaccttacctccaatgtct
agaatttgcaattccttcatgattgacctcatgattaagcatgaccccaaattgatgacc
gtgaaagctgactccgagaatggtgcaacgaatgacttgcctacgctcatgaacgggcat
atcgagtcaaagatgccggcattgaaggaagaagcgactcaacaaaaattattgacattg
gattgccaatggataactaagaactga
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