Daphnia pulicaria: 124340482
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Entry
124340482 CDS
T08670
Name
(RefSeq) transcription factor HIVEP3-like isoform X1
KO
K09239
human immunodeficiency virus type I enhancer-binding protein
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpz03000
]
124340482
Transcription factors [BR:
dpz03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
124340482
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-met
zf-C2H2_8
zf-C2H2_16
NOA36
SF3a60_Prp9_C
Motif
Other DBs
NCBI-GeneID:
124340482
NCBI-ProteinID:
XP_046648973
LinkDB
All DBs
Position
5:6888703..6897183
Genome browser
AA seq
1810 aa
AA seq
DB search
MEEWNVTLPNRSSGKSPRCQVDDGRCNGNNKKPMAPIRAAKVTAPAVSPSQSVNEATPEA
TQSSDLGYLHKKFKKVAATFSTTPEPALPAVAADPPTDESCAVVVDPAKKEDQQPDSNGS
SKSSSKGGRYVCHYCQHACAKPSVLEKHIRAHTNERPYPCVPCGFAFKTKSNLYKHCKSR
THVLKLEENGTAHSQLTGSAGIIIDPVEGGSDDTSDDNVMLDDSDEGEPLVVAVPPQPAE
IIVSVSSAPSTPEKFKTPYKPKFHNLKSSDDILETPPTTDEGRPSPGFLHERISQIISKN
QAIVETLDPIWPRRYVRQSSRDNKETAKSPRPDIVISSPSIKKSGLAGRERSCSLSLVPH
ADQTTDSMVLAVPSSVAPSSTHRLLQEDENQRKRCYSEGPAVTEIRHSVRNLLQQSPKPP
RTDVFNPQNPEGSIIKDILLKSRGLLPANCEAKESAVAVVDPPTKMSSSFTVSALLNPST
TRAKPTVEFPHPHISLDPADDPAERPPSKRSKISDVTQSAPFPRPPVDPEMIRSTSSSSF
VADRIRTSLPLFGGEVEIHDGPQRTVLRIDPAGYVESNRSNGQSTATAESPSSVVVTKVS
NLNNSGGLFRLQPQESRISVFPVMKTAETKSGGDPARGVIIHQPSVPYIPGIPGPYSSSG
WLPASTMTSVTVSYTTTTTVCTSQSTTTSQRPVPSITVHPPAASLLQPPHPEERTDSGFD
DEDPSTQASPKFLRPNSLSLQPGTFNLKKSNMAGLDPQSGQPNMLCVSGAGMTLISPETP
RPRKLFRQLYLNGHAYTYLGLKCSTRVYFCCLSRAQPMYVPHHPKLSMYSQWKTRAPASA
GPPGLEASSPTQTMSLYDSRQRPTTCTTAQSTDHGRMILTHSSYWTNRDRPTTTHFKLQV
TAAQDVVHIEIPPPVAAQSTPEESRPPDQVISPTAQAQTKPVQPKRVRIFAGGYKSTEDY
TYVRGRGRGRYVCEECGIRCKKPSMLKKHIRTHTDLRPYTCRQCNFSFKTKGNLTKHMKS
KAHHKKCTELGIVPVPTTVDEANIDEDSLARQETLKKMKLAGGSGNEGDSDLDDDEDEDE
DDEEDEEIEGEEEEDETEDDPPVTTKLLPTGQFEDATAAEPVREEREQEVARSLLDLGVI
APAGCKPTTYPYASHFHPPEEEQHPSVEMKEEPPAPVCKQQPMDLSTSTAASSALLASIY
SPIVSETAARRLSPENSVQPATSGMLQAYLTEKALKEGLMKRHQVKLMTPPSVVVENPVV
TLFPTQSKSSRSEFVVPLSSTCPAAIPTSVTAYKLTDDGKTACSICNKVFTKPSQLRLHI
NIHYFERPFRCEACAVSFRTKGHLQKHKRSVTHFNKVNMNLTFGTPSTENPRPFKCSDCM
IAFRIHGHLAKHLRSKMHIMKLECLGKLPFGTYAEMERSGINLNEIDTTDCHNSLESLQS
LAHRLYKQDPSKIQQWQQEAQVVAEANLRERTISESSEEFSDVADDELDEDGEDSDGLPD
GAGVEEAPPPRKSTPVETLPAQPEMSHPPRAAAVSPDARKAPPPPPVMYCSACGDSCVSM
EAFQSHVMEKHRPLSPPTTRTPFKASPPATAPESPAKLAPPSNIQPDIGRVVNLAVESRR
SPSRVMETGPKPGPPWNRGPGDLQYAQPRGGFYSGPPHSSSTMWPPPQPRQPTIGDLMSL
GNPLSAIPPQWHQDQAAMAWIASRHMMLPGHPPTYTTPHHSGGHHTTNGVAMQPRLYSPT
SSSSSIAANDVDVVFPCELCGKSFNAKETLRQHMLAHAQPRPFVCEFCDAGFTTQKHLES
HLVLHRPRTS
NT seq
5433 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatggaatgtgaccttgccaaacaggtcatccggcaagagcccccgttgtcaa
gttgacgatggacgttgcaacggcaataataagaaacccatggcgcctatccgagctgcc
aaagtcacggcacccgccgtctcaccgtcacaatcagtcaacgaagctactccggaagcc
actcaatccagcgatcttggctatttgcacaagaaattcaaaaaagtagccgccactttt
tcaactactccggaaccggctcttccagcggtggcggctgatccgccgacggatgaatca
tgtgctgttgttgttgatccagccaaaaaggaggatcaacaacccgatagcaatggctcg
tcgaaatcttccagtaaaggtggccggtatgtttgtcactactgccaacacgcctgcgca
aagcccagcgtcctggagaaacacatccgggcgcatacaaacgaacggccctacccgtgc
gttccgtgcggatttgctttcaaaaccaaaagtaacctctacaaacactgcaagtcacgc
acacacgttctcaaattggaagaaaacggaacggcccattcgcagttgactggatcagcc
ggaatcatcatcgatccggtcgaaggcggaagtgatgatacttcagacgacaatgttatg
ctcgacgatagcgacgagggagagccactggttgttgctgttccgccacagccggccgaa
atcattgtgtccgtttcatccgcaccatccactccggagaaattcaaaacgccgtacaaa
cccaaatttcataatttaaaaagttcagacgacattttagaaactccaccgaccaccgac
gaaggacggcccagccctggattcctccacgaaaggatcagtcaaatcatcagcaagaat
caagccattgtcgaaacgctggatccgatttggcccaggcgatatgtccgccaatccagt
cgagacaataaagaaacggccaaaagtccccggccggacattgtcatttcatctccatca
atcaagaaatccggtctagccggaagagaaagaagttgcagtttaagtttggttccgcat
gcggatcagacgaccgactcgatggttctggccgtcccctcgtctgttgctccatcgtcg
acccaccgactgttgcaagaagatgaaaatcagaggaagagatgctactcggaaggtcca
gccgtcaccgaaattcgtcattccgtccggaatttattgcaacagtctcccaagccgccg
cgaacggacgttttcaatccacaaaatccggaaggttccatcattaaggatattttgtta
aaaagtcgcggattacttccggccaactgcgaggctaaagaatcggcggtggccgtagtc
gatccgccgacgaaaatgtcatcgtcattcaccgtgagtgctctactgaatccgtccacg
acccgtgccaaacccacggtcgaatttccccatccacatatcagtttagatccggcggat
gatccggcagaacggccgccatcaaaacgatccaagatttcagacgttacgcaatccgct
ccatttccacgtccgccagtcgatcctgaaatgatccgatcaacatcgtcgtcttctttt
gtggccgatcgaatccggacgtcgcttccgcttttcggaggtgaagtggagatccatgac
ggtccccagaggacagtgttgcgaatcgatccggcgggttacgttgaatcaaatcgatcc
aacggccaatctactgcaaccgccgagtcgccgtcctcagttgtcgtgacaaaagtgtcg
aatttaaataattccggtggtctatttcgtctgcaaccgcaggaatcccgcatttccgtt
ttccccgtcatgaaaaccgccgaaaccaaatccggcggtgatccagcccgtggcgtcatc
attcatcaaccttccgtgccttatattccgggaattcccggcccctacagttcaagcgga
tggcttccggcttccaccatgacgtctgtcaccgtttcctacaccaccaccaccacggtg
tgtaccagccaatcaacaacaacatcacaacgtccggttccatcgattacggtgcatccg
ccagccgctagtctcctacaacctccgcatccggaagagcgaacggatagcggattcgac
gatgaagatccatcgacccaggcgtcacccaaattccttcgccccaattctttatcgttg
cagccgggcacgttcaatttgaaaaagagcaacatggccggcctggatccccagagcgga
cagcccaacatgctgtgcgtttcaggagcgggaatgacgctcatcagtcccgagacgcct
cgtccgcgcaagctatttcgccagttatatctcaacggccacgcctacacctatttgggc
ctcaaatgctcgaccagggtctatttttgctgcctgtcccgggcccagcccatgtacgtc
ccgcatcatcccaaattgtccatgtattcgcaatggaagacgagagctccagcctcagcc
ggcccgccgggattggaagcctccagcccgactcaaaccatgtccctttacgattccaga
caacgcccgacgacttgtacgacggcccaatcgaccgatcacggccggatgattctgact
cattcgtcttattggaccaatcgcgacagacccacaacgacgcatttcaaattgcaagta
accgccgcccaggacgtcgttcacattgaaattcctcctcctgttgctgctcaatcgact
ccggaagaatcccgtccgccggatcaagtcatcagtccaacggcccaggcccagacgaaa
ccggttcaacccaaacgagtgcggatctttgccggcggctacaaatccaccgaggactac
acgtacgttcgtggtcgagggcgaggccgttacgtgtgcgaagaatgcggaatccgctgt
aagaagccatccatgttgaagaaacacatccgcacgcacacggacctgcgcccctacact
tgccgccaatgcaatttcagtttcaaaaccaaaggcaatttgactaaacacatgaaatct
aaagctcatcacaaaaagtgcaccgagctgggcatcgtgcccgtccctaccaccgtcgac
gaggccaacattgacgaggacagtctggcccggcaggaaacgctcaaaaagatgaaactg
gccggcgggtccggcaatgaaggcgattccgatttggacgacgatgaagatgaggatgaa
gatgacgaggaagacgaagaaattgaaggtgaagaggaggaagatgaaacggaagatgat
ccgccagtgacgactaagttattgccaactggacaatttgaagatgccacagcagccgaa
ccggttcgtgaagaacgtgagcaagaagtggccaggagtttactggatttaggtgttatt
gctccagctggatgtaaacccacgacttatccttacgccagccatttccatccgccggaa
gaggaacaacatccttcggttgaaatgaaggaagagcctccagcgcccgtttgtaaacaa
cagccgatggatttatccacttcaaccgctgcttcatcggctcttttggcttccatctat
tcgcccatcgtgagcgaaacggccgctcgtcgattatctcccgaaaattccgtccagccg
gccaccagtggcatgctgcaagcctacctgacggaaaaagctttgaaggagggactgatg
aaacgtcaccaggtcaaattgatgactccgccctcagtcgtggtcgagaatcccgtcgtc
actttattcccgactcaatccaaatccagtcgttcggaatttgtggtgcctttgtcgtcg
acttgtccggcggccattccgacctcggtgacggcctacaaattgacagatgacggcaaa
acggcgtgcagcatttgcaacaaagttttcacgaaaccgtcgcaactgcgattgcacatc
aacatccattactttgagcggccgtttcggtgcgaggcctgcgccgtttccttccgcacc
aagggccacctgcagaagcacaagcgatccgtgacgcatttcaataaagtcaacatgaat
ttgactttcggcacgcccagcacggagaatcctcgaccgtttaaatgttccgactgcatg
atcgccttccgcattcacggccacctggccaaacatctccgctccaaaatgcacatcatg
aaactggaatgcctgggcaaattgccctttggcacttatgccgaaatggaacgatcggga
atcaatctcaacgaaattgacacgaccgattgccacaattcactcgaaagtctccaatca
ttggcccatcgtctctacaaacaagatccatccaaaatccagcaatggcaacaagaggcc
caagtggtagccgaggctaatttgagggaacggacaattagcgaatcgtcggaagaattt
tcggatgttgcggatgatgagctggatgaagatggggaagatagcgacggccttccggat
ggagccggtgtcgaagaagctcctcctccacgaaaatcgacaccagttgaaacacttccg
gcacagccagaaatgagccatccgcctcgtgctgctgccgtgtctccagacgccagaaaa
gctccgcccccgccaccagtcatgtattgttccgcttgcggagattcgtgcgtttccatg
gaagcgttccaatcacacgtcatggaaaaacatcggcctctgtcaccacctacgactagg
acacccttcaaggcttctccacccgcaacggctcccgagtctcccgccaaattggcacca
ccgtccaacatccagccagacattggcagggtcgtcaatttggctgtggaatcgagacga
tctccatcccgcgtgatggagactggccccaaacctggcccaccctggaaccgtggtcca
ggtgacctgcaatatgcacaaccccgtggtggcttttacagtggcccaccgcattcatct
tcgaccatgtggccaccaccacaaccgcgacagccaacgattggtgacctcatgagcctg
ggcaatccgctgtcggctattccacctcagtggcatcaggatcaagccgccatggcctgg
atcgcatcccgacacatgatgctgccgggtcatccgcccacttacactactccgcaccac
tctggcggccatcacaccaccaacggagtagccatgcagccgcgcctctacagtcccacc
tcctcgagttcttccatcgcagccaacgacgtcgacgtcgttttcccctgcgaactttgt
ggaaaatctttcaatgccaaagagacactccgacagcacatgttggctcacgctcaaccg
cgaccgttcgtttgtgagttttgcgacgctgggttcacgactcagaagcaccttgaatcg
catctggttctgcatcggccacgtacgtcctga
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integrated database retrieval system
