Daphnia pulicaria: 124340586
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Entry
124340586 CDS
T08670
Name
(RefSeq) nucleoprotein TPR-like
KO
K09291
nucleoprotein TPR
Organism
dpz
Daphnia pulicaria
Pathway
dpz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124340586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpz03019
]
124340586
Messenger RNA biogenesis [BR:
dpz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124340586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
124340586
NCBI-ProteinID:
XP_046649127
LinkDB
All DBs
Position
1:complement(10953910..10962231)
Genome browser
AA seq
2327 aa
AA seq
DB search
MAAVSLLSLVLSEDEFKILNDSIKIKLEEVLKKHENDSNHLNIKFAKLQTQSEQQCFELD
SQLQQLQDRSRREESLIQELTDGKAKVEADLASSQDQLNHVGSKLALLEATHQEWKKEKE
SLSEEKDNLNSLLSRRNDDLDRLTGELKALTDQLVHANKEKSEALIKTEELNSQQLALDY
KEKRLNQERELIVRQQRLLQDELESRTKEVMNIRREKTSKVLELQADLSEKIEELRIAQK
SIGELTTTIERHEKHTKELNDKLKELSETEMKMSENNRNELRSQMRLCDLYKASSEDAQA
KADEITKTTEELQRLLRDASVRFGNLETDSKAQIDQLNDQLQKSSETNGELKKELERANA
LLDPNKSRLITEENIEAMSPSAAAASRLLKSGMTLTQIYSQYVSISEQMLFKEEENKKLN
NYIDQILQELEDRAPTIARQREDYEKSIEMVANLTRQLDLAVEEAETERENALEARRMLG
QSQRTSQRLEKQVSDLSKQVCLLIRETEELRGNRIRDEPADEDQVTSSEGSAAAVISRHL
VTFRDVEELQQKNQMLLTTLREVTEKQDAAEQSEIDTKTAKIQRALENALTEVEHLRDTR
RRHEELMESVIQQRDMYRILLQEAGLGDAQTPSKFRSVVTSTPAQVRQESARPADIELQL
NESKKCVEEKETKLQSILKEKKEREAALDHQIQALQGQLAELRAQNVRLSTHNEYSDSKE
KLLQGNLDSCKKQLNALEDKNKVYATTIAKHEQSIAVLRDEAMNAQQLLARAEVNVSMLQ
EEKQLLKDAEQRLLVERNALVSERRSQGLLHANLESIKLNLERGECETRMRLQNNVTALE
QQIELLRKKLDLEEQRYRETVKSFEDKLASDQVLLKAAEEKAANAEAQLVATRERLTLAE
SRTGLTSPTRKGQVTRLLSTTPTSVAAANDSDLVGDLRAQLAEARTESSKHREQLELVRQ
QAEQYRSIADSMEEQLNKSNEASQTFKQETEQHLVKLNEDRSELARNLQEAQNKLKTLEE
GAAILGQATAHQSEEVSNRITALEAELASMAEKFKLAEDSEAKAREEALDQVKNAKEAQE
KYERELMQHAADVEQLNSVRDQFEQTLSQLAVLQQTSARIETELASGRISWETQKEMLEK
EASEKARRCSDLDKQVDLMQQQIVTLSTRMAAATRCQEIAVRTQSGDDSNTSLNVSISEE
DMRSTDQLLELVRFLRREKEIAISRSEVQEAETQRLKTQLEQAERLASEAQTNLHHERER
SATSALTSEKHTEMLRRLETLNALTDSNRLLRDERSGLISRLEELTVKVSALETELEPLR
STNQESASKLDELTSENNTLRKQVMVWRTRTNALQERAGRATADEIKKLQTDKELVQKQL
EQIQKQVEHMKEIQTKTATQLTETQRINTQLITTQHKLQEEARVAKEESQKAQTDMTTAI
AKRDEETAKAADQANQLRRIARKYKTQYEELKVEHEKLVGDKETLASAAADSAMATTTAV
QDEAANAATAEASAATAVAQSTRIQELEEQIAQMTAELEQIKQENQAMRSKDEKATNVLK
TTRQKLASLPNLIKEKEALVSQLTEARDKIENLEQGSEELNVRTAALRSQLEGRLNRLER
ENSELGAAKQALESELETLQQRIPVLQRQVEAYQKQLVLVQQKQQKQQIQQAPQQTSNKP
PSADKTISENPPTANIKPMASGATVTPQRPPVSSSPGQSTSGPNQIHRTTPTASIRPMAM
TTRTLAVQPTSVSVSPMAPPLIAIAAPTPVAPSTPSPVVREDEPVAGPSFVSGGDQTQST
SGADDRSKKRTRVTEESPSTDDASAKRTRLSEQTEEEVEVVDLHDEPTEESTEEYTARTG
EMDLVIEYEEQPQDDHEVEEEEVEEGLIESEEEEMVETVESEEGEQEDECDEIVVEEQRD
DVEEQTQSGQDSEAVLTINEDESASGTVEQSTETEEIVIVVQEEQQPAAEDVEPETFAPA
STNETAPSSEVSQTTIRPPPREDRLPSFGRNTLAFEDVGDDGIVPSTPVLLRPRTNDGFA
EAVSSPQVNTRFVFGTVPDLSLSTGSSHINAPSHLESQGMEDTRMDLSQLDENSGRSVPS
TPLQASPHDELPTGCPGEDASVVPSGNAEEQGDFEGGPDLEGDAAAEIDLLGEDDQDTGI
DNDQSTSQLGQDAGPTSTNEDESMPEVQNAQSVEGPGQSMTTQPSSAPSFSCSPTTRAAM
TRRGSMAGFPRGRGMSREDSRLSAGPNPSRPVPITWTPNPESQQAYTPNPARVFRRATAV
VASPAPGTPSVTTEPPVVVPTAAPVPSLIRGRGATRGRPRARAPRRM
NT seq
6984 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgttagcctcttgtcgttagttttatcggaagatgaatttaaaattctaaat
gactcgataaaaattaagttagaagaggtattgaaaaagcatgaaaatgattccaaccac
ctgaatatcaaatttgccaagctccaaacccagtctgaacaacagtgttttgagttggat
tcacagcttcagcaactacaagatcgttcacgaagagaggaatctctaattcaagaattg
acagatgggaaagccaaggtagaagccgatcttgcatcctcacaagatcagctcaatcat
gttggatcaaaactggctttactggaagctactcaccaagagtggaagaaagaaaaggaa
tcactttcagaagaaaaggataatcttaattctctactttcaagaagaaatgacgacctg
gatagacttacaggggagctcaaggctttaactgatcaacttgttcatgccaataaagaa
aaatctgaagcccttataaaaactgaagaacttaacagccaacagcttgctctggattac
aaagaaaaaaggctgaatcaagaacgggaacttattgttcgacagcagaggcttttgcaa
gatgaacttgaatccagaacaaaggaggttatgaacatcagacgtgagaagacttctaag
gtgctagaactgcaagcagatttgtctgagaaaattgaagagttacgaatcgctcagaaa
tccatcggtgaactaacaacaacaattgagcgacacgaaaaacatactaaagaattaaac
gataaactcaaggaactaagtgaaacagaaatgaaaatgtccgaaaataatagaaatgag
ctgagatctcaaatgagactttgtgatttgtacaaagcatcgagtgaagacgcccaagcc
aaagctgatgaaattaccaaaactaccgaagaattgcaaagactacttcgtgatgcctca
gtgcgatttggaaacctggaaacagattctaaggctcaaattgatcagctaaatgaccaa
ttacagaaaagttctgaaactaatggggaattaaagaaagaacttgaacgtgccaatgcc
ttacttgatcccaacaaatcacgtttaataactgaagaaaacatagaagctatgtcacca
tcagctgctgcagcttcacggttgttgaaatcaggaatgaccctgacgcagatttatagt
caatatgtctccatttccgagcaaatgctattcaaagaggaagagaataaaaagctgaat
aactatattgatcagattctccaggaacttgaagatcgagcgccaaccatagctcgacag
cgagaagactatgagaaatcaattgaaatggttgccaatttaactagacaacttgattta
gctgtagaagaagcggaaaccgagagagaaaatgctctcgaagctcgccgtatgctggga
cagtctcaacgaacttctcaacgtctcgagaagcaagtttctgatctgagtaaacaagtt
tgtttgctcattcgtgaaactgaggagcttcgaggtaacaggatacgcgacgagcccgct
gacgaagaccaggtgacgtccagtgaaggatcggctgctgccgtaattagtcgccacctc
gtcacgttccgtgatgttgaggagcttcaacagaaaaatcaaatgttgctgaccaccctc
cgtgaagtaaccgaaaagcaagacgctgctgaacagagtgagattgataccaaaaccgcc
aaaattcagcgtgcattggaaaatgcactgactgaagtcgaacaccttcgagatactcga
aggcgccatgaagagctgatggagagtgttatccaacagcgagacatgtatcgcattcta
cttcaggaagccggattaggagacgctcaaacaccgtccaaattccgtagtgttgtcacg
tcaactcctgctcaagttaggcaagaaagtgctcgaccggcagacatagaactgcagctt
aatgagagtaaaaagtgtgtggaagagaaggagacaaaactccaaagcatccttaaagaa
aaaaaagagagggaggctgctttagaccaccaaattcaagcacttcaaggccagttagct
gaattaagggcacagaacgtacggttaagtacacataacgaatattccgattcgaaggaa
aagttactgcagggtaatttggattcttgcaagaaacagttaaacgctttagaagataag
aataaggtgtatgccaccacaatcgctaaacacgagcaaagcattgcagttctacgagac
gaggctatgaatgctcagcaactccttgcgcgggcagaggtaaatgtttcgatgcttcaa
gaagaaaaacaattactgaaagatgctgaacaacgtcttctagtcgagagaaatgcatta
gtaagcgagcgacgtagccaaggccttcttcatgccaacttggaatcgatcaagctaaat
ttggagcgtggcgaatgtgaaactcgaatgcgtttacagaacaacgtcactgctttggaa
caacaaattgagttgctacgaaagaaactagatcttgaggaacaacgttatcgagaaaca
gtgaaatctttcgaagataaacttgcatctgatcaagttcttttgaaagctgcagaagag
aaagccgccaatgcggaagcacaattggtagcaactcgtgaacgtttgactctggcggaa
tcgcgaacaggattaacatctccaactcggaaaggacaagtaacgcgtttactgtctact
accccaacatccgtcgctgctgctaatgacagtgatcttgttggtgatctacgagctcaa
ttggctgaagcgcgtacggaatcgagcaagcatcgagagcaattggaactcgttcgccaa
caagccgaacaataccgttcaattgccgatagcatggaagagcagctcaacaaaagtaac
gaagccagccagacattcaagcaagaaacagaacaacatttggttaaattaaatgaagat
cgttcagaactagcccgcaaccttcaagaagctcagaataaacttaagactttggaagag
ggagcggcgatcttgggtcaagcaacggcgcaccagtcagaagaagtttctaatcgcatt
acagcactcgaagccgaattagcttcaatggctgagaaatttaaattggccgaagattct
gaagcaaaagcccgcgaagaagcattagatcaagtaaagaatgccaaggaagcacaagaa
aagtacgaaagggaattgatgcagcacgcagccgatgtggaacagcttaattccgtccgt
gatcagttcgaacagaccctctctcaattagctgttcttcaacagacttcagctagaata
gaaactgagcttgcgagtggtcgcattagttgggaaacacagaaagaaatgttggaaaaa
gaagccagtgaaaaggctcgacgctgttccgatctagacaaacaggttgatttaatgcaa
caacagattgtcactttaagtactcgcatggcagcagcgacacgttgccaggagatagcc
gtcaggacgcaaagtggtgacgattctaacacttcgcttaatgtctccatcagtgaagaa
gatatgcgttctactgatcaattgctcgaactcgttcgatttctgcgtcgggaaaaggaa
attgccatttcccgatctgaagtacaagaagccgaaacgcagcgtctcaagacacaactg
gaacaagccgaacgtcttgcaagtgaagctcagactaatttgcatcatgagcgagagcgg
tctgcaacatctgcactgacatccgagaaacatacagaaatgcttcgtagattggaaaca
ctgaatgctcttacggatagtaaccgactgttgcgagatgaacgaagtggtcttatcagt
cgacttgaagaactaacggttaaagtgagtgctttggaaaccgaattggaaccattgcga
tctacaaaccaggagtcagccagtaaattagatgagctcacttccgagaataatacattg
cgcaagcaagttatggtttggaggacaagaaccaacgccttgcaagaacgagcaggccga
gctacagccgatgagattaagaagttacaaactgacaaggagctggttcagaagcaatta
gaacaaattcaaaaacaagtggaacacatgaaggagatccaaaccaagacagccacgcag
ttgactgaaactcaacgaatcaacacgcaattgattacaacacagcataaattacaggaa
gaagctcgtgttgccaaagaggagtctcaaaaagcccagacggacatgactacagctatt
gccaaacgtgatgaagaaacagccaaagctgcggatcaagcaaatcagttacgccgtatt
gctcgcaagtacaagacacaatacgaggagctcaaagtcgaacacgaaaaactagtcgga
gataaagaaaccttagcttctgcagcggcagattccgcaatggcaacgacaacagcagtc
caagatgaagctgctaatgctgcaacagctgaggcatctgctgctacggctgtcgctcag
tccacgcgaattcaggagttggaggagcagatagcccaaatgactgccgaactggagcaa
attaagcaagagaatcaagccatgcgttcaaaagatgagaaggctacaaatgttctgaaa
acaactcgtcaaaagttagcgtccttgccaaacctcatcaaggagaaggaagctcttgtt
tctcaactaacagaagcacgtgacaaaattgaaaacttggaacaaggaagtgaggaactt
aatgttcgtactgctgccctacgttctcagttagaaggccgactcaatcgactagagcga
gagaatagcgaattaggtgcggctaaacaagcgcttgaaagcgagctagagacattgcaa
caacgcattccagttttacagcgccaggttgaggcttatcaaaagcaactcgttttggtg
caacagaaacagcaaaaacaacagattcagcaagcacctcaacaaactagcaacaaaccc
cccagtgctgacaaaacgatatcggagaatccacccacagctaacattaaacccatggca
tcaggagcaactgtcacaccacaacgtcctccagtgagttccagtcccgggcaatcgaca
tcaggaccaaatcaaatccaccgtaccactccaactgctagtattcgtccgatggccatg
actacccgtacgttagcagtgcagcctacttctgtttcagtatctcccatggcgccacct
ttgatcgccattgcagcccctactccggttgccccgtctactccgtctccagttgtgaga
gaagacgaaccagttgcaggacccagcttcgtgtccggaggtgaccaaactcaatctacg
agtggagctgatgatcgctcgaaaaaaagaactcgcgtcacggaagaatctccttccaca
gatgacgcaagtgccaagaggacacgtttgtctgaacagacagaagaggaggtagaggtc
gttgatttacatgatgaaccaacagaagaatctacggaagaatatacagcacgaaccggc
gagatggacttggtgattgagtatgaagaacagccccaagacgatcatgaggtcgaagag
gaagaagtagaagaaggtcttatcgagagtgaggaagaagaaatggtagaaacagtagag
tctgaagaaggcgaacaagaagatgaatgtgatgaaatagtcgtcgaagagcaacgggac
gacgtggaagaacaaacacaatcaggccaagattccgaagctgtcttgacaatcaatgaa
gatgaatcagcttcaggcactgtggaacaatctactgagacagaagaaattgtcattgtt
gttcaggaagagcaacaacccgctgcggaagacgtagaacctgaaacgttcgcacctgcc
tctacaaacgaaactgctccttcttctgaagtgtctcaaactactattcgccctccaccc
agagaagatcgtttgccctcatttggtagaaatactctggcctttgaagacgtgggggat
gatggaatcgttcccagtactcctgtccttctgcggccaagaacgaatgatggttttgct
gaagccgtcagttcgccacaagtcaacacgcgcttcgttttcggaactgttccggatctg
tcgctgtcgactggcagtagccacatcaatgctccttctcatttggaatcgcaaggcatg
gaagatacacgtatggatttgtctcagctagatgagaactctggtcgtagcgtgccatct
acgccattgcaagcgtcaccccacgacgagttgcctactggctgcccaggagaagacgct
tcagtggttccatcaggaaatgccgaagaacaaggagatttcgaaggtggtcctgacctt
gaaggtgatgctgccgccgaaatagaccttcttggcgaagatgaccaagatactggtata
gataacgatcagtccaccagtcaattagggcaagatgcaggtcctacaagtacaaatgaa
gatgaatctatgccggaagttcagaatgctcaatcggttgaaggcccaggccaatcaatg
acgacacaaccatcttctgcaccatcgttttcttgttccccgactactcgggcggcaatg
actcgacgaggatcaatggctggttttccacgtggccgaggaatgagccgcgaagattca
cgcttgtcggctgggccgaatcctagtcgtcccgttcccattacttggacgcccaatcca
gaatcgcagcaggcttatactcctaaccctgcacgtgttttccgtcgcgctacagctgta
gtggcgtcacctgctccaggtacgccttctgtaacaactgagccacctgttgttgtcccc
acagccgctccagttccatcgctcattcgaggcagaggagcaacgcgaggtcgcccgcga
gcaagagcaccaaggcggatgtaa
DBGET
integrated database retrieval system