Daphnia pulicaria: 124340711
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Entry
124340711 CDS
T08670
Name
(RefSeq) protein transport protein Sec24A-like
KO
K14007
protein transport protein SEC24
Organism
dpz
Daphnia pulicaria
Pathway
dpz04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
124340711
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpz04131
]
124340711
Membrane trafficking [BR:
dpz04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
124340711
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
124340711
NCBI-ProteinID:
XP_046649274
LinkDB
All DBs
Position
5:complement(4232760..4237880)
Genome browser
AA seq
1046 aa
AA seq
DB search
MLICPVCQVSAEFGMASQPPLQFNQMQPAIPNAAGISQPPRLQRPSIASNGIGQPTAGST
FPLPSTTNYAPVPALSNTASSQWARPPISGQSVPTPISQSSFTTTSQQQCNPAVPGQISS
RPMLQPLNSARPPNAFAMNQQSSGPPLNPYQGGQSNLNGNLGPPMVNGAGTPSSYSGVNY
TTTVPNSMGYSSSGVPPQYPTQSFMPPQLPAGTAHSTGGPAGPAPPQQQYSTGYQNYSPA
HGQGQLPPVSGIHPQQLSYPGAPVPNAPVNQFPNFNSTIDKMTSQMNTLSVTQTGFDKIW
GHENVDLLQVRNILPAQGVETPRIRLRQEHLNNVHCSLDIFRCTLTKIPETNSILQKSRL
PLGVLIHPFKDLTQLPVIQCQTIVRCRSCRTYINPFVYFVDQRRWKCNLCFRVNDLPDEF
QYDPMSNSYGDPTRRPEIKNATIEFIAPAEYMLRPPQPPVYLYLLDVSHAAVETGYLKLF
CDVLLEELEKIPGDTRTQIGVITFDSSVQFYNLAENLNQPHQLVVSDIDDIFLPCPNDLL
VNLNESKRLVIELLEQLPLKFNNTTECNSALGAALQAAYKMVSPTGGRITVFQASLPNIG
PGALKPREDPNQRAAKDVPNLNAATDFYKKFALDCSGQQVAVDLFLLSGQYMDIASLSCV
SKFSGGCMYHFPSFHYIHNLPQVERLEHSLRRYLTRKIGFESVMRIRCTQGLSIHTFHGN
FFVRSTDLLSLPNINPDAGFGLQVSIDENLSETQHICFQAALLYTSSKGERRIRVHTMCL
PIASTVADVIQSADQQCIVGLLAKMAVDRSLHSSISDARDAIVNVCVDVLSAYKATMSSA
PSGLYAPSNLRLLPLYLAALLKSVAFRTGQSTRLDERVFAMNQFKALPLSQLILSIYPDL
YAIHNLHDQGAISQGDMVIPQPPRLHLSAEMVDSAGAYLLDSGDVIYLYVGRNVHQVFLE
QVLGASSFQSLPEQMFELPELETNESERLRNFLIHLQNQRPYPAVLQFIREDSQIRHLFS
SHLVDGRTESSLSYYEFLQHLKNQIK
NT seq
3141 nt
NT seq
+upstream
nt +downstream
nt
atgttgatctgtccagtctgtcaagtttcagcagaatttggaatggcctctcaacctccc
cttcaatttaatcaaatgcaaccagcaataccgaatgcagcaggaatttcccaaccacct
agacttcaacgcccatccatagcaagtaatggaattggacaaccaactgctggttctaca
tttcctttaccttcaacaacaaattatgctcctgttcctgcgttaagcaatacagcaagt
tcacagtgggcaaggcctccaatttctgggcaatctgtcccaactccgattagtcagtcc
agttttacaacaacaagccaacaacagtgtaatccagcagttcctggacaaatttcttct
aggcctatgttacagcctctaaattcagcaaggccaccaaatgcttttgcaatgaaccaa
caatcttcaggtcctcccttgaatccttatcaaggtgggcagtccaatttaaatggaaat
ttgggccctccaatggtaaatggagcgggaactccgtcatcatactcaggtgtgaactat
actactactgttccaaacagcatgggctactcctcgtctggagtaccaccacaatatcct
actcaaagtttcatgccaccacaattaccagctggaacagctcattcgacgggtggacca
gccgggcctgctccaccccagcagcagtatagtactggatatcaaaattactcacctgca
catggacagggtcaattgccaccagtttcggggattcaccctcagcagctaagttatcct
ggcgcacctgtacctaatgctccagtcaaccagtttccaaattttaattcaactatcgac
aagatgacatcccaaatgaacaccttgtccgtaactcaaacaggatttgacaagatttgg
ggtcacgaaaatgtagacctactccaagtgcgaaatattttgcctgctcaaggtgtggaa
actccccgaattcgccttcgacaagagcatttaaataacgtgcattgcagtctagatatc
tttcgctgcactctgacgaaaattcctgaaacgaattccatattgcagaaatctcggctc
ccactgggagtgttgattcatcccttcaaagatttgacgcaactaccggttattcaatgt
caaactattgttcgctgtcgatcttgtcgaacctacatcaatcccttcgtttattttgtc
gatcaacgacgatggaaatgcaatttgtgcttccgagtgaatgacctacctgatgagttc
caatacgatccgatgagcaacagttacggcgatcccactcgtcgtcctgagattaaaaat
gctaccatcgaattcatagctccagcagaatacatgcttcggccacctcagcctcctgtt
tatctttatctattggatgtaagccatgcagcagtagaaacaggttacttgaagctgttt
tgtgatgttcttttggaggagcttgaaaaaataccaggagacactagaacgcaaatcggt
gtcataacatttgacagcagtgttcagttttacaatcttgccgagaatttgaatcaaccg
caccaattggtggtgtcagacattgacgatattttcttaccgtgccccaacgatttgttg
gtcaatttaaatgaaagtaaaaggctggtcatagaactgttagaacaacttcctttgaag
ttcaacaacacaacagagtgtaatagtgccttgggggctgctttacaggctgcttacaag
atggtaagtcctaccggaggtcgcattacagtgttccaggcatcgttacccaatattggt
cctggggcattgaagccaagagaagatccgaaccaacgagcagccaaagacgtgcctaat
ttgaatgcagccaccgatttctacaagaaatttgcactcgattgttctggtcagcaagta
gccgtagatcttttcttgctgagcggtcagtacatggatattgcctcattatcttgcgtg
tcgaagttctccggtggatgcatgtatcattttccgagcttccattacattcacaatttg
ccacaggttgagcggttagagcattcattgcgtcgatacctgacacgcaaaatcggcttt
gaatccgttatgcgaattcgctgtactcaaggcctgtcaatccatactttccatgggaac
ttctttgtgcgctccactgatttgttgtctctaccaaatataaacccggatgcaggattt
ggccttcaggtttcgatcgacgaaaacctaagcgaaacccaacatatttgctttcaggca
gctctgctctacacatcaagcaaaggcgagcgacgtatacgagtacacacgatgtgtttg
cctatcgccagtacagttgctgatgtcattcagtcggcagatcagcaatgcattgtagga
ttgttagctaaaatggctgttgatcgttcgttgcactcgagtataagtgacgcacgggat
gccatcgtgaacgtttgcgttgacgttttatcagcctataaagctacgatgagttctgcg
ccatcaggactgtacgcgccctctaacttgaggctgttgccactatatttggctgcatta
ttgaaatcggttgctttcagaaccgggcagagtacgcgtctagatgaacgcgtttttgcg
atgaaccagttcaaagcattgcctttatctcagctaattttgtccatctaccctgatttg
tatgcgattcataatttacacgatcagggagcgataagccagggagatatggtgataccg
caaccaccacgtctacatctgtcagcagagatggttgattcagctggggcgtacttactt
gattcgggagacgtcatatacttgtacgtgggtcgtaatgttcatcaagttttcttggaa
caagtacttggagcatcaagtttccaatcgttacccgagcaaatgtttgagttgccagaa
ctagaaacaaatgaatcagaaagactacgaaactttttgatccatcttcaaaatcagaga
ccgtatccagcagtactgcagttcataagggaagacagtcaaattcgacatctgttttct
agccatcttgttgacggtcgaactgaatcttccctttcatactacgaattcttacagcat
ctaaagaaccagataaaataa
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