Daphnia pulicaria: 124340770
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Entry
124340770 CDS
T08670
Name
(RefSeq) huntingtin-like isoform X1
KO
K04533
huntingtin
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpz03019
]
124340770
04131 Membrane trafficking [BR:
dpz04131
]
124340770
03029 Mitochondrial biogenesis [BR:
dpz03029
]
124340770
Messenger RNA biogenesis [BR:
dpz03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
124340770
Membrane trafficking [BR:
dpz04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
124340770
Mitochondrial biogenesis [BR:
dpz03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
124340770
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_N-HEAT
Htt_C-HEAT
Htt_N-HEAT_1
HEAT
HEAT_EF3_N
DUF1844
Motif
Other DBs
NCBI-GeneID:
124340770
NCBI-ProteinID:
XP_046649349
LinkDB
All DBs
Position
5
Genome browser
AA seq
2602 aa
AA seq
DB search
MMASLERLIRALELLQIAENSNSDNHVKKKELRTHLQNIVEFNNSLNVQNHKDFVSYIGP
SIDSLIRLCDSKDSDIRLASDEGLYKVIKALLPLHSNRILVELCKQIKKSESPRILKLSM
TRFAELCHLARPQKRRAYIANLFNAISTIANRKEEMLHESLSNFVCKVFNVMGIFAYENE
TKILLKGFLANLSSSSSIIRRCAANAITVIISTNRKSDILLALVVEYLTDQILLPDDISM
TDTPVIIGTLLTLKLLLPLFQLSSNQTNANLNTKHLSVSLPKITTSLNAVALERIVQIFE
LGVHYSFSSDHNVVNAALELLQQLLKMRSLILAIPSLKSVNGLQGTRISLRGLSKENSQW
NLTALPFAEESLLLEAEVHLGEFEKTSMDSTESDVEIAEDSIVALSVDEREDFSKSLTLN
ETDVLASEKELEETDVEPENCDSIDAPQAIDIGTLYDKTVSPLLYCARHLSYSFLLSERK
GQIKSDRSVRVSVKSLALNCLAHIGSLEPLIWNSHLSDTDGKIAIIDVLQYSTHDDPQLR
GQVALLACMVLSNVIGGFDLTSVEKRTLVRIIDETLIDKETAASRLALQGLQHFLPMALE
GPFCVETVPLLRSLLKLAENPYWLVRVDLLEVFGSFSWTALEFGLQNQTNFKLPKFQECF
LNKVLFTMIGDEDHRVRSAVANCLTCLMESWTVGRSPSNITRAKWLASVSGSTPQKLHVK
TFAGVPLSINGLAEAYWDVSLNQNVSVNLAYFVDEIFQLLVSSNSKFVKMGCLQSLSTLS
CSYPPATYLEVYGCSSKGTCSLLKVCMALLTNSTLMLDLVTHQTLITLATQLFAGCVKAG
LNEPQLEKDFKDWRFLKGPSSATASCLLGHATRILNAFCCVLDDVNPLLVSIKVPLVTLP
NPSALSPIRRKLRSTESLISDKEDKSDESGRKNKPHLLNPSNVGFFAAQPLYVKLYDLLK
STHATCKLNFDTITSERLSNFIQSTLELLAALIEVSIFQDIGKHSEEILNYLRIIITAEP
VYCLRNVQQLLKALFGANLAAVWFDEAARFKRSAISSSLQATVKCDESIYSSCGLDELLY
NSAGRQMNFNRNNERQNLITKFRPSINKIGPDKTALTSYIRLFEPMVIKALKLYTVTSCP
LVQKQVLDLLCELIHLSVNYCLLDADQVFLNFVIQQFEFLEEGFIPQVETLLPSMFRFLS
LLSYDRFHSKTIISVPRIMQLAGGLMATGKDAELHVLPTLQPMVEDLFLSRERMSDNFKE
LETQKEVLINLLIRLIQYHKVYPLITAVLLQVQFENANKWKSLSKQICDALIPQLNRHSL
FLDSDEALQMLQKLISHMDPPVVHESLLGLLQTFTPKQSEDFNTSAAMNYHRVLACRLTV
FKTLIAVFDEAFLLDCLNEFNLSYLVNQRSDPLNVTPTENSPPEHILSCLLVDTIKLALS
HWKSKVVVDNCGSTSISWRIDGFSFSVHLVLDLIALCRRLLNSNDFPVLQTAILAELARD
ECKSPIFQVARELIPNNPIVFVRICALLLSENYHIQSENIASFGGLNGSIAQEGLFLLLS
GVVPKEEKKILKFVSLYADQILNHFNETPVKKFYGSLIHNDEKYIKPLVKCVLAKGQDLL
QISSAMALLNIIENVELANSEAILLHIISSFQTICSGIVHRRMCKLVLNANFTSSESKLR
CLENVQKIVLQSANQRWYSEITAVPSATFENRSSMLRDIDKAFVLDFALKRELEPLMWRE
IVAQTNTDDFPLLCSNHSFLLYVLGSRILKSDAFYHAKAYLLNMVTTEAFDNSKILSIAH
ILSALCKSISPSEVNDIFTASEITILAKTPLTLIGAMDSLSHSLVLLQASSEIVSIFGRE
LAIEWTDKENLPAVYKAIHCLESLCIRIRNNATLEQPTITGLEQMICPDPNFVSSAKQLN
RILRFIEQESNIPGILHQDLLSTVTVFCRMPLFYSYICIPPSTWSKGWNPELNLDVEHIT
LDLPIIPSHFLHDEVVLKEFVFRIERISWITKKKFEEIWMTFLGILNLHNEDQVRPEEQA
SVIQATCEAVRALTMVLQKNLPFKTPRCVKNNELDKPPEFTSTERGKKLKELCNLLEEDY
TISSSCSYWLNRHSFRHIQYNIDQGSPSKKKATSPEDVTDIDIQSCVRFLVDLYSQWLQN
SNTPYPLLVDLFQSLVHISNFFVDVQQFEWMLDNSLTLHRQLLPDDPASLESALVGCILK
SASFIPMNMEYWELVKKHCETALNSQHISTRTSGLNGLLYLLQKFARNPDLARTGTLVNL
AMDYVGKCLSPEHNGPTWHQSFVWSIAFYCGEHFAVLPYQNYAVVDFVVQCALSRLVQNE
QQSNEIPKEILQGLERLSILGVLTPTWRTKVKKEVLNLIRNVDCDWILQPALRTLLSLVY
SDFGSQLYKPGADPETMLAAMEWVGALFQRMKRGTDLEAELLGRIMPVITCDIFPPADIL
NRILSEFITARPTVACCLTPTIFKVFGTARTQGQQSLVMEWILLSLSNFTRTPSDTANDS
IWNILCFFTAASNNPWLQSVFPLINRPVNHNDSLVEDVFVASALDFNSQLDDQQRSTLVS
IFYSAREKSSFFAAVDVALKRL
NT seq
7809 nt
NT seq
+upstream
nt +downstream
nt
atgatggcttctctagaaagacttattagagcccttgaactattgcagattgcagaaaat
tcaaattcagataaccatgtaaagaaaaaagaactgagaacacatctgcaaaacattgtt
gaatttaacaatagtcttaacgttcaaaaccacaaagattttgtctcgtacatcggtccg
agtattgattccctcattagactgtgtgattccaaggattctgacattcgactagcaagt
gatgaaggattgtataaagtcatcaaggcacttcttccattgcatagtaacaggattcta
gtagaattatgcaaacagataaaaaaaagtgaatctcctcgtatattgaagttgtctatg
actagatttgccgaactttgccatctagctcggcctcagaaaagacgtgcatacatagca
aatctttttaacgccatatcaacaattgccaatcgcaaggaagagatgcttcatgaaagt
ttgtccaattttgtttgcaaagtctttaatgttatgggaatatttgcttatgaaaatgaa
acaaagattctgttaaagggatttctagcaaatttatcttctagttcttctattataaga
agatgtgctgccaatgccatcacagtaataatatctacaaacagaaaaagtgatattttg
ttggcactggttgtggaatatttaacagatcaaatccttttgcctgacgatatttccatg
acagatacaccagtgattataggaactttgctaactctaaaattgcttcttcctctcttt
caattatcatctaatcaaacaaatgcaaatttgaatactaaacacctctcagttagtctt
cctaaaatcactaccagcttgaacgccgtggctttagaacgtattgttcagatatttgag
cttggagttcactattctttttcttcggatcacaatgttgttaacgcagcgttagaactc
ctacaacaattgctgaagatgcggtcccttatcctagcgattccctccctaaaaagtgta
aatggattacaagggactcgaatttctctaagaggattatccaaagaaaacagtcagtgg
aacttgactgcgcttccatttgcggaagagtctcttctcttggaggcggaagttcatctg
ggcgaattcgaaaagacgagcatggattcaactgaaagtgacgtagaaattgcagaagat
tcgattgttgcactttcagtcgacgaaagagaagatttttcaaaaagtttgactttaaac
gaaaccgatgtattggcttcagagaaagaactggaagaaactgatgttgagccagaaaat
tgtgacagcattgatgccccacaggcgatcgacataggaacgctgtatgataaaacagtg
tccccccttctttactgcgcccgccatttatcttacagtttcttgctttccgaaagaaaa
ggccaaatcaagtcggatcgatctgttcgtgtttcagtaaaaagtctagccctcaattgc
ttggcgcacattggatcactggagcctctcatttggaattcgcacttatcagacacagat
gggaaaatcgcgataattgatgttctccagtatagcacacacgatgacccacaattaaga
gggcaagtggctctgctggcgtgcatggtgctcagcaatgtaattggtggatttgattta
accagcgttgaaaaaagaaccctcgttcgcatcattgatgaaactctaattgataaagag
acagctgcttctcgccttgctcttcaaggtctacagcacttcctacctatggccttagaa
ggcccattttgcgtggaaactgtaccgcttttacgttcattgttaaaactcgcggaaaat
ccttattggctggtaagagtagatctcttagaagtgtttggttcattttcctggacagcc
ttggaatttgggctccagaatcaaacaaatttcaaattgccgaagttccaagagtgtttc
ctaaataaagttttatttacaatgatcggcgacgaagatcatcgagtccgaagcgcggta
gcaaattgtcttacttgcttgatggagtcatggactgtaggaagaagtccttcaaatatt
actcgcgctaaatggttggcatctgtcagtggttcaactccacaaaaactgcatgtaaag
acttttgctggtgtccccctatctatcaatggattggcagaagcctattgggatgtttcg
ttgaaccagaacgtctctgtcaacttagcttattttgtcgatgagatatttcaactactt
gtttcttccaattcaaagtttgtcaagatgggctgcctgcaaagtttgtctaccttgagc
tgttcttatcctcccgctacgtacttggaagtttacggctgtagctcaaaaggaacttgc
agtctcttgaaagtatgcatggcactcctgacaaactctacgttgatgttggatctagta
acacaccagaccctaatcacacttgccactcagctctttgcaggatgtgtgaaagcaggt
ttaaacgaaccccaattagagaaagattttaaagattggcgttttctaaagggcccttcg
tccgctacggcgtcttgcctattgggtcatgctacccgtatattaaatgcattctgctgt
gttcttgatgatgtcaatccattactggtttcaattaaagtacctttggtgacgcttcca
aacccgtccgcgctaagtccaatccgtcgcaaacttcgaagcactgaaagtctaatatca
gataaagaagataagtcagatgagtccggccgtaagaacaaaccacatttgcttaatcca
agtaatgtcgggttttttgctgctcaacctctctacgtgaaactttacgatttactgaag
agtacgcacgccacttgcaaactgaattttgatacgattacctcggaacgcttgtcgaat
tttatccaatctactttggaattgctagccgctctaattgaagtttccattttccaagat
attggaaaacacagcgaggagattctcaattatttacgcatcattattacagctgaacca
gtctactgtttgcgcaacgttcaacagttacttaaagcgctttttggagccaatttagca
gctgtctggtttgacgaagcagcccgatttaaaagaagcgcaatttcttcaagtttgcaa
gcaacagtgaaatgtgacgagagcatttactcgagttgtggattagatgaattattgtat
aacagtgctggacgtcaaatgaatttcaaccgaaacaatgaaaggcaaaatctgataacc
aaatttcgaccttctataaacaaaattggccctgataaaactgccttgacttcttatatt
cgcttatttgagccgatggtcatcaaggccttgaagttgtacaccgtcacaagctgtcca
ctagttcaaaagcaagttttggatcttctttgcgaattgatccatcttagcgtcaactac
tgccttctcgatgccgaccaggtttttctcaattttgtcatccaacagtttgagtttcta
gaagaaggtttcataccgcaagtcgaaactctgttgccctccatgtttcgatttttgtca
ctattatcgtatgatcgcttccattcaaaaactattatttctgtcccacgcattatgcag
cttgctggtggattgatggctactggaaaggatgctgaactgcacgtgcttcccacattg
caaccgatggtcgaagatttgtttctttcaagagaaagaatgagtgataactttaaggaa
cttgaaactcagaaagaagtccttataaatttactcattcggttaattcagtatcacaag
gtttaccctttgataactgctgtattacttcaagtgcagtttgaaaatgcgaacaaatgg
aaatccctctcgaagcaaatttgtgatgcactcatcccgcaactcaataggcattcgcta
tttttggattcagacgaagccctccaaatgcttcaaaagctgatttctcatatggatcca
cctgttgtgcatgagtctctactagggcttttgcagacatttacccctaagcaatcggag
gatttcaatacttcagcagctatgaactaccatcgtgtattggcctgccgtttaacggtt
ttcaaaaccttgattgctgtttttgatgaagctttcttgttggactgtttaaatgaattt
aacctaagttatttggtcaatcagagaagtgacccgttaaatgtaacgcctacagagaat
tcaccgcctgaacacatcttgtcatgtttgctggttgacactattaagttagctctaagt
cattggaaaagtaaagtggttgttgataattgtggctctacctccatatcgtggagaatt
gatggtttctcattttccgtccatttagtactggacttgattgccttgtgtcgtcgctta
ttaaactcaaatgatttcccagtgctgcagaccgccattcttgcagaattggcgcgtgac
gagtgtaagtctcctatatttcaagtagcaagggaattgattcccaataatccgatagtt
tttgtgcggatttgcgctttgttattgtcggaaaattatcacatccaatccgaaaatatt
gcttcttttggtggacttaacggaagtattgcgcaagaaggactttttctattgctctcc
ggtgtggtgcctaaagaagaaaaaaaaatcttgaagttcgttagcttgtatgcagaccaa
atcttaaatcacttcaatgaaacacctgtgaagaagttttatggaagccttattcataat
gatgagaaatacatcaaaccacttgtgaagtgtgtgctagcgaaaggccaagatttattg
cagatatcctcggccatggctcttttgaatataatagagaatgtcgagcttgcgaattcg
gaagcgattcttttacatatcatttccagttttcagacaatttgcagtggcattgtgcac
agaagaatgtgcaaacttgttctgaacgcaaatttcacttcttctgaatctaagcttcgt
tgtttggaaaatgtacaaaaaatcgttcttcagtcagctaatcaaagatggtattccgag
atcacagcagttccaagcgctacctttgaaaataggtctagcatgttgcgagatatcgac
aaggcgtttgtgctggattttgcgttgaaaagggagttagaacctttaatgtggagagaa
atcgtcgctcagacaaacacagacgactttccgttattgtgcagcaatcatagttttctt
ttatatgtccttggaagtcgaatattgaaatctgatgctttttaccatgccaaggcatac
cttttaaatatggttaccaccgaagccttcgacaactctaagattctgtcaatcgctcat
attctcagtgcattgtgcaaatccatctcaccatcggaggtcaacgatattttcactgca
tccgaaatcaccatattggctaaaacaccgcttaccttaattggtgcgatggattcgctt
tcccattcgttagttcttctacaggcgtcctctgagattgtttccatatttgggcgtgaa
cttgcaattgaatggacagacaaagagaatctaccggcagtttacaaggcaatccattgt
ttggagtctctttgcattcggataagaaacaatgcaactctagaacaaccaactattacc
ggcctggagcaaatgatttgtcctgatccaaactttgtttcaagtgcgaaacaattaaac
cgaatacttagatttatcgaacaagaatcaaacattccaggaatacttcatcaagactta
ctgtcgactgttactgtgttttgtcgaatgccactcttctattcctatatttgcattccg
ccatccacttggagcaaaggctggaatcctgagctaaatttggatgtcgaacatatcaca
ttggatctaccaataatcccttcacattttctgcatgatgaagttgttttaaaagaattc
gttttccgaatcgagcgaattagctggattaccaaaaagaaatttgaagaaatttggatg
acttttcttggcattttgaacttacacaatgaggatcaagtgagacccgaagaacaagca
agcgtcatccaggctacatgtgaagctgtgcgagctcttacaatggtgcttcaaaaaaat
ctaccatttaagacgccaagatgtgtgaaaaataatgaactagacaagcctcctgagttc
acgtcaactgaaaggggcaagaagctgaaagaactctgcaatttgctagaagaagattac
acgatatcatcttcctgcagttattggctcaatcgtcactccttcagacacattcaatat
aatattgatcaaggttcaccatccaaaaagaaggctactagtccagaagatgttacagat
atagatatccaatcctgtgttcgcttcttagtggatctctactcacagtggcttcagaat
tcgaatacgccgtacccgctgctagtggacttgtttcaatccctagtgcacatatcaaac
ttctttgtcgatgttcaacagtttgagtggatgctggataactccttaaccttacatagg
caacttcttcctgatgatcctgcgagcttagagtccgctttagtagggtgcatcttgaaa
tctgcttcttttatacccatgaatatggaatactgggaattagtaaaaaagcactgtgaa
accgcattgaattcccagcatatttccacgcgaactagtggattaaatggtcttttgtat
ctacttcaaaagtttgccagaaatccagatcttgctcgtacaggcactctcgtcaacctg
gctatggattatgtcggcaaatgtctcagccctgaacacaatggtccgacctggcatcag
tccttcgtttggtcaatagcgttctattgcggcgaacattttgcagtattgccctatcag
aattatgctgtcgtcgattttgttgttcagtgcgctcttagtaggcttgtgcaaaatgaa
caacaatcaaacgagatcccaaaagaaattttacagggattagaacggctgagcattcta
ggcgtattgactccgacttggcgaacgaaagttaaaaaagaggttctcaatttaatacgc
aatgttgattgtgattggattctacagccagcactacgaactctgctgtcattagtctat
tcagattttggtagccaattgtataaacctggagcagatcctgaaacgatgctcgccgct
atggaatgggtgggcgccctgttccaacgaatgaagcgcggaacagatctagaggcggag
cttttggggcgaattatgcccgtcataacctgtgatattttcccaccagcagacatcttg
aatcgtattttaagtgaatttataacggcaagacccacagttgcctgttgtttaactcca
accattttcaaagtttttggaacggcacgtactcaaggacaacaaagtttagtcatggag
tggattctcttaagcctcagcaattttaccaggacgcctagcgacacagcgaatgattcg
atctggaatattttatgttttttcaccgcagcctccaacaacccatggttgcagtcagtg
tttcctctcataaaccgcccggtaaatcataacgattctttagtggaagacgtatttgtt
gcatctgcgctggatttcaactctcagcttgatgatcaacagcgatccacattagtttct
atcttttattctgcgagagaaaaaagttcattttttgccgctgttgatgttgccctaaaa
cgcttgtga
DBGET
integrated database retrieval system
