Daphnia pulicaria: 124340807
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Entry
124340807 CDS
T08670
Name
(RefSeq) structural maintenance of chromosomes protein 1A-like isoform X1
KO
K06636
structural maintenance of chromosome 1
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpz03036
]
124340807
Chromosome and associated proteins [BR:
dpz03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
124340807
Meiosis-specific proteins
Cohesin complex and associated proteins
124340807
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_29
Trimer_CC
DUF1664
Motif
Other DBs
NCBI-GeneID:
124340807
NCBI-ProteinID:
XP_046649445
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All DBs
Position
5:complement(5275266..5280551)
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AA seq
1251 aa
AA seq
DB search
MAKLRSNLKYIEVENFKSYLGFQRIGPLKNFSAVIGPNGSGKSNFMDAVSFVMGEKTQTL
RVKRLADLIHGASINKAVSNSAKVSAIFELEDKTELKFTRLVSHGSSEHRFNDETVNSSR
YFAELEKLGINVKAKNFLVFQGAVENIAMKNPKERTALFEEISGSGALKEDYDRLKADML
KAEEDTQFTLQKKKGIAAERKEARMEKEEAEKYQKLREDLAEQQVIFYLFKLFHCEQDIK
TAREDITKKQQELGKVERRKEKAEEILREKKKEHTKIGKELAKMEQDIREIESEINKKRP
TFIKAKERVTHMQKKLEAAQKSLTQARKANDAHAEDIDQLEKELTEVDKRREEYETELQS
ESQSQGRSVHLEEEQVAQYHRLKEEAGRQSARYLQELDSVNREQKSDQDKLDNESRVRGE
IENQLRQRQHELEETQKRSDKLMEHIRTTETALEEQIKLQRDLTSEVEQSKNQIDTLQSK
LDGISKNLGEAKVDKHEDARRRKKQEIVENFKRLYRGVYDRIINMCHPVHQRFNIPVTKL
LGKYMEAIVVDTEETARNCIQYLKEQMLEPETFLPLNYLKAKPLKERLRVIKDPLNVRLL
YDVLQYDPPEIKKAVLFVTNNALVCDTQEDAMKVAYEMEDGDRYDAVALDGTFYQKSGLI
SGGSRDLEKKAARWNDKQLSALKSNKEKLSEELREAMKKSRKESELHTVNCTVKGLDSRH
RYALADREKTAKQIEQLMREIAKLEEKLRNFAPATDEIEKIMRERDATIQNVKERMNRVE
DTVFAEFCSQIGVANIRQYEERELRLHTWTQQERAKKRLDFENQKNRILNQLEFERSRDT
QTNVERWERSVSDDEEELERAKQAEQKQMSEIDKEMKKLEEIKSTRMCKKNDLDNMDEDM
ALARRDMGAVAKDLQNIQKSITSMEAKIDQKRSERHSILKQSKMEDIVIPMSRGNMEDIE
QDGNATESMNSESVTTGGSDSVSTPQNSQTIYEREERIVVDYSDLPDKYKDLFEADEVRR
EGDRLQRHVNELSNTIQRIQAPNMRAMQKLDLAREKLHETNEEFEKARVKTKKAKQAFER
VKKERFDLFMSCFEHVSNEIDGIYKSLAKNQSAQAFLGPENPEEPYLDGINYNCVAPGKR
FQPMSNLSGGEKTVAALALLFAIHSYQPAPFFVLDEIDAALDNTNISKVAGFIKTQTANL
QTIVISLKEEFYSHADALIGVCPDPGECLISKMLLLDLTEYPPHTFEETQR
NT seq
3756 nt
NT seq
+upstream
nt +downstream
nt
atggccaaattaaggtccaacctaaagtatatagaggtcgaaaatttcaagtcctatcta
ggctttcaacgtattggacctttgaagaacttctcggcagtaattggtccaaatggctca
ggaaaatccaatttcatggatgctgttagttttgttatgggtgagaagacacagacgctc
agagtgaaaagacttgccgatcttattcatggagcttccattaacaaagctgtgtctaat
tctgccaaagtttcagctattttcgagctcgaagataaaactgagctcaaattcacaaga
cttgtttcacatggttcatctgaacacaggttcaatgacgagacagtgaattcttcaaga
tattttgctgagttggagaaattaggcatcaatgtaaaagccaagaattttttagtgttc
caaggagctgttgaaaatattgcaatgaagaaccctaaagaaaggactgcgctatttgaa
gaaatctcaggttctggtgctttgaaagaagattatgatagattgaaagcagatatgttg
aaggcagaagaagacactcagtttactctgcagaagaagaaaggtattgctgctgagaga
aaagaggctagaatggagaaagaagaagccgaaaagtaccaaaaacttcgcgaagatctt
gccgaacaacaagttatattctacctatttaagctgtttcattgtgagcaagatataaaa
actgccagggaagacataaccaaaaaacaacaagaacttggaaaggtcgagagacgtaaa
gaaaaagcagaggagatcttaagggagaagaagaaggaacacacaaaaatcggaaaagaa
cttgcaaagatggaacaagacattcgtgagatcgagtcggaaatcaacaaaaaacgaccg
accttcatcaaagccaaagagcgagtaacgcacatgcagaaaaaattggaagccgctcag
aaatcacttactcaggccaggaaagcgaatgatgcccacgcggaagacatcgatcagctt
gagaaagaactaaccgaagttgacaagcggagagaagagtatgaaacagaattgcagtct
gagagccagagtcaaggtcgcagcgtccatttggaggaagaacaggttgctcagtaccac
cggttgaaggaagaggccggaagacaatcagcgcgttatcttcaagaactcgactcggtt
aatcgcgagcagaaatctgaccaggataaactggacaatgagtcgcgtgttcgaggcgag
attgaaaaccaattgcgccaacgacaacacgagctggaagaaactcaaaaacggtccgac
aaattaatggaacacattcgaacgacggaaacggccctggaagagcagataaaactgcaa
cgcgatctgacaagcgaagtcgaacagtccaagaaccagatcgatacgctacaaagcaag
ttggacggtatctcaaagaatctgggcgaagcgaaagtcgacaaacatgaagacgcgcgt
cgccgtaaaaagcaagaaattgtcgaaaattttaagcgtctctaccgtggcgtttacgat
cgaatcattaacatgtgccaccctgttcaccaacgtttcaatattcccgtcactaagctg
ctcggcaagtacatggaagccatcgtggtcgacacagaagaaacggctagaaactgcatc
cagtatctcaaagagcaaatgttggaaccagaaacttttcttcctctaaactatctaaag
gcgaaaccattgaaggagcgacttcgtgtcatcaaggatcctctcaacgtgcgtctgctt
tacgatgtgttgcagtacgacccgcccgagatcaagaaagcagttttgttcgttaccaat
aacgcgctggtttgcgacacgcaagaagacgccatgaaagtggcgtacgaaatggaagac
ggtgatcgttacgacgctgttgccctggacggcacattttaccagaaatctggtcttatt
tctggcggctctcgggatttggagaaaaaggctgcccgctggaacgacaagcagctcagt
gccctgaaatccaacaaagagaaactgagtgaagaattgcgagaagctatgaagaagtcg
aggaaggaatctgaactccataccgtcaactgtactgtcaaaggtttggattctaggcat
cgctatgcattggctgatcgtgaaaaaactgccaaacaaattgagcagttaatgagagaa
attgcgaaactggaagaaaaattgagaaattttgcgccggcaacagacgaaatcgagaaa
atcatgcgcgaaagggacgccactatccagaacgtcaaagaacgtatgaaccgtgtagaa
gacactgtttttgccgaattttgctctcaaatcggcgtggctaacatccgccagtatgaa
gaacgggaactcaggctccatacatggacacaacaagagcgagccaagaagcgcctcgac
tttgaaaaccagaagaatcgtatcctcaaccagctggaattcgagcgttcccgagacaca
caaactaatgtggaacggtgggagcggtctgtgagtgacgacgaagaggaacttgaaaga
gccaaacaggccgaacaaaaacaaatgagtgaaattgataaagaaatgaaaaagttggaa
gaaattaaatcgacccgaatgtgcaaaaagaacgacttggacaatatggatgaagacatg
gccttggctcgccgagatatgggagcagtagcaaaagacctgcagaacattcagaagtct
atcaccagtatggaagcgaaaattgatcaaaaaagaagtgaaaggcacagcattttgaag
caatcgaagatggaagatatcgttattccaatgtcgcgcggtaacatggaagacatcgag
caagatggtaatgctaccgaaagtatgaatagcgaatctgtcacaaccggtggtagcgat
tcagttagcactccacaaaactctcaaacgatatatgagcgagaagagagaattgttgtc
gattactctgacctacctgacaagtataaagatctttttgaagcggacgaagtacgccgt
gaaggcgatcgcctacaacgtcacgtgaacgagttgagcaatactatccagcgtattcaa
gccccaaatatgcgggctatgcaaaaattggacttggcgagagaaaagttacacgagaca
aacgaagagtttgaaaaggctcgcgtcaaaaccaagaaagctaaacaggcgtttgagaga
gtaaaaaaagagcgctttgatctctttatgtcttgttttgagcacgtttccaatgaaatc
gatggcatttataagtcgttggccaagaaccagtctgctcaagcctttttaggtccagaa
aatccagaagaaccttaccttgatggaatcaattacaattgtgtcgctccgggcaaacgt
ttccaacccatgtctaatctttccggaggagaaaagaccgttgcggctttggcattgcta
ttcgccattcacagctatcaaccagctcctttcttcgtactggatgagatcgacgcagct
ttggataacacaaacatcagtaaagtagctgggttcattaaaacacaaacagccaacttg
caaactatcgttatttctttgaaagaagaattttacagccatgctgatgcgctcattgga
gtttgccctgaccctggggagtgcctcatcagcaaaatgcttctcctggatcttaccgaa
tacccgccgcacacgtttgaagagactcaacgctaa
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