Daphnia pulicaria: 124340818
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Entry
124340818 CDS
T08670
Name
(RefSeq) RB1-inducible coiled-coil protein 1-like
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
dpz
Daphnia pulicaria
Pathway
dpz04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124340818
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dpz01009
]
124340818
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpz04131
]
124340818
03029 Mitochondrial biogenesis [BR:
dpz03029
]
124340818
Protein phosphatases and associated proteins [BR:
dpz01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124340818
Membrane trafficking [BR:
dpz04131
]
Autophagy
Autophagosome formation proteins
ULK complex
124340818
Mitochondrial biogenesis [BR:
dpz03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
124340818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG17_like
ATG11
TBK1_ULD
ubiquitin
KIF9
DUF7674
CcdA
Motif
Other DBs
NCBI-GeneID:
124340818
NCBI-ProteinID:
XP_046649474
LinkDB
All DBs
Position
5:1330777..1335327
Genome browser
AA seq
1141 aa
AA seq
DB search
MLYVFLVDTGTTLTFDMNLALDTVANLKEVVYKASKIAPDKQILLISGGQGLDPSHRVCS
YSAGTDTNPIFLFCKSTIESAVPPSPSIDFGSAHDLRHKAEVCLNDKETTYQTVVARVQL
AQQFYETGREITRVCEQLVHDQHMQQQGWSAVVANLEDVMTDFKGRTQLFEQTYQHYLSS
REEYLDILSHFWDDLNALANIPVLSCLLNKAEEMPLLDWVHSTDDEDTNLNVVADSCTKA
LEQMDHQLLQALERNIKSALSSAERPEMKEIRGLEERLFGLEQLLVEARKQVQEQCDIAQ
ALLQNQQRARNFNDASILPELCTSHRHQIKVMLKNDDRLRDIRSRCSRAKEELGKNLHAR
LRWMMFVQRQLNEVHERLNLQNENLRRLRRHFDLLRQLHQAPSIYLRSMVEIVRRKHFAA
KFIEWAATLSGYSATVHQDESSLRKSFIESCEGHFLTQLFPGILEQFTPSFATSPPSPFD
VNLPSVSIDDLERLKNALPTLWDKLKLPNNIKDVLRDPPILERLYSSAQKLTPIELQVET
SVLPSLSAALLSPPVRPSRSKVKRSQSDFHSDYHIDDASDSIIRCRDDAGLELQQQLEET
VKGQRCRLLALQSHLQCALEAGQTALPVFRSELNSIRKLTIEWSQVANEQLARLRFELIQ
HIREMFASTEKSSEIILEEVKSQNKKLDEEKFKLEAELKSVRIELEDWKKQCSQWQEEKK
ELVGSAQFCLRQREEELEKQRIEQLRQQKMKYKQEINALKETVKSTEEKCKAIVSEWQAV
SEQENPDALRTWKQELMLGHEVELEQLKLEKDSELSGLLELQTQMTLPDTNDWKAKYEHL
LKENETQKLQLQEELQRKHRLEIEGLRSRFRMMASQSPSTDCRSRSDSLDKFEMRTTPPA
SPCNLVRTKRVSESHSDELLLPLVEKLKQEKDKLSTLVESYTTHYKTSNTKPTKWEATLS
EALKESNQMMQSVGSRVDQLRQESVNLSSKPPLPFTTSISQISSVNMAASVAVLQSDDKS
SPSPLLPPKSSLKKKPMSKMTRSLVRQGSANVYGCEVGDAVVVQWDERYSTHILYNKGPY
LHFLHADSISSLGLQNVTMEPFLARVIQREFCLVRKEENRYNLPKGTNFYRVKVDRINST
S
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgctatacgtattcctagttgacactggaactactctgacgtttgatatgaatttggct
ttggatacggtagctaatcttaaagaagtcgtttacaaagcctccaaaattgctccagac
aaacaaattcttctcatcagcggaggacaaggcttagatccatcacatcgtgtatgcagt
tattctgcaggcactgatacaaatcctatatttctcttctgcaagtcaaccattgaaagt
gctgtcccaccttcacctagtatagattttggctccgctcacgacttacggcataaggca
gaagtttgtctgaatgacaaggaaactacatatcaaactgtggtagcccgtgttcagtta
gcccagcaattttatgaaactggaagagaaatcacacgagtatgtgagcaactagtccat
gatcaacatatgcagcagcaaggatggtctgctgttgttgccaatcttgaagatgttatg
actgatttcaaaggaaggacccagctttttgaacagacataccaacattaccttagtagt
cgtgaagagtacctggatattcttagtcatttctgggatgacctcaatgctttggccaat
attccagttttgtcatgtttgctcaataaggctgaggaaatgccactccttgactgggtt
cattcaactgacgatgaagacacaaacctcaatgtagttgctgattcttgcacgaaagcc
cttgaacaaatggatcaccaattgttgcaagctctggaaagaaacataaagtccgctctt
tcttctgctgaacggccagagatgaaagaaatcaggggactggaggagcggcttttcggt
cttgagcagttgttggttgaagctagaaaacaagtccaggagcagtgtgatatagctcaa
gcgcttcttcagaaccaacagagagcccgaaattttaatgacgcttctattctacctgaa
ttgtgtacatcacatcgtcatcagattaaggttatgttgaagaatgatgatagacttcgc
gatatccgaagtcgttgtagccgagctaaggaagagttgggcaaaaatctacacgcccgt
cttcgctggatgatgtttgttcaacgccaactgaatgaagttcacgaacgattgaatctg
caaaatgaaaatttacgtcgactccgccgtcactttgatttacttcggcaactgcatcaa
gcgccaagtatttatcttcgttccatggtcgaaatcgtcagacgaaaacactttgccgcc
aaatttattgaatgggcagcgactctttctggttattctgcgacggtgcatcaagatgaa
tcgtcgttgcgcaagagctttattgaatcttgcgaagggcactttctgacccaattgttt
cctggtattctcgaacagtttactccatcttttgctacgtcacctccttccccatttgat
gttaatttaccatcggtttctattgatgatttggaacgcttaaaaaacgcgctgcctaca
ttatgggacaaattgaaattacccaacaatatcaaggacgtgctgcgagatccacctatt
ctagaacgtctttattcatcagcacagaagttaactccaatagaactccaagttgaaact
agcgtacttccgagtctttcagccgcattactttcgcctccggttcgaccaagtcgatcc
aaggttaagcgttcccaatccgacttccattctgattatcacatcgacgatgcttccgat
tccattattcgctgtcgagatgatgctggactagaacttcaacagcaattggaggagact
gtcaaaggccagcgttgtcgattgctggcacttcaatcccacttgcagtgcgctctagaa
gctggtcaaactgcactcccagtttttcgttcagagttgaactccattcgaaaattaacg
attgaatggagccaagttgccaacgaacaattagctcgtttgcgattcgaattaattcaa
catattagagagatgttcgcctctacagaaaaatcttcagaaatcattttggaggaagtc
aagagtcaaaacaaaaaattggatgaagaaaaatttaaattggaagcagaattaaagtct
gttcgaattgaacttgaagattggaagaaacaatgcagccaatggcaggaagaaaagaaa
gagcttgtcggtagcgctcaattttgtctacgacagcgggaagaagagctggagaaacag
agaattgaacagttgcgccaacaaaaaatgaaatacaagcaggaaattaacgccttaaaa
gaaacggtaaaaagtaccgaagaaaagtgtaaagcaattgtcagcgaatggcaagccgtt
tccgaacaagagaatccagatgcattaaggacatggaaacaggagctgatgcttggtcac
gaagtagaactcgaacagttaaagttggaaaaagattcggaattaagtggccttctggaa
cttcagacccaaatgacgcttccagacactaacgattggaaagcaaagtatgaacatttg
cttaaagaaaatgaaacacaaaaacttcaactacaggaggaattgcaacgtaaacatcgc
ttagagattgaaggacttagatcacgatttcgcatgatggcaagccagtccccgtcgacg
gattgtagatcaagatccgattctttggacaaatttgaaatgcggacaaccccacctgcc
agcccgtgcaatctagtgagaactaagcgagtatcggagagtcattcggacgaactgttg
ctacccttagtagagaagttgaagcaagagaaggacaagttatctacgcttgtcgaaagc
tatacaacccactacaagacgagcaacaccaagcctacaaaatgggaagcaacgctttct
gaagcgttaaaagaatcgaatcagatgatgcagagcgttggttcaagagtagatcaactt
cgccaagaaagtgttaatctctcaagcaaacctcctcttccatttaccacatccatatcc
cagattagttcggtgaacatggcagctagtgtggcagttttgcagtcggatgataaatcg
tcaccaagcccattacttcctccaaaatcttctttaaaaaagaaaccaatgagtaaaatg
actaggtcgcttgtcagacaaggttcggctaatgtttacggttgcgaagtgggagatgca
gtagttgtacaatgggatgaacgatattcaactcatattttgtacaataaaggaccgtat
ctccattttttgcatgccgattcaatatcctcgctcggattacagaacgtgacgatggag
ccgtttttggctcgtgttattcaaagggagttctgcctggtccggaaggaagaaaatcgt
tacaatcttccaaaaggaacaaacttttatcgtgtgaaagtggaccgaataaatagtacc
tcttaa
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integrated database retrieval system
