Daphnia pulicaria: 124340830
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Entry
124340830 CDS
T08670
Name
(RefSeq) DNA topoisomerase 3-alpha-like
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
dpz
Daphnia pulicaria
Pathway
dpz03440
Homologous recombination
dpz03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124340830
03460 Fanconi anemia pathway
124340830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpz03032
]
124340830
03400 DNA repair and recombination proteins [BR:
dpz03400
]
124340830
Enzymes [BR:
dpz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
124340830
DNA replication proteins [BR:
dpz03032
]
Eukaryotic type
DNA Topoisomerases
124340830
DNA repair and recombination proteins [BR:
dpz03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
124340830
FA (Fanconi anemia) pathway
124340830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
124340830
NCBI-ProteinID:
XP_046649501
LinkDB
All DBs
Position
5:complement(2268640..2272888)
Genome browser
AA seq
1058 aa
AA seq
DB search
MLLFSHFKLSGIKHVSLNLLEFTRCCKTTAVLAESCKMVQVLNVAEKNDAAKNIAELLSR
GRANRREGRSKFNKIYEFEHNLFNQNVKMSVTSVSGHLLSSDFVGNYKKWQGVNPVTLFE
APIHKFVADDYQNIKRTLEEETKKSKYLIIWTDCDREGENIGYEVITVCQAIKPSIQVFR
AKFSEITYQSIARALQNLGPPNKNVSDAVDVRIELDLRIGAAFTRFQTLRLQKVFPESLG
QSMISYGSCQFPTLGFIVERYKAIQDFVRENFWKLKVVWELNKEERVEFLWKRHHLFDQT
VVQIILEKCQENPEAEIIKVQTKNKSKWRPLPLDTVELEKLASRKLRINAKETMKIAEKL
YTQGFISYPRTETNIFPKELDLTPLVQCQTVDPAWGGFAQRVLDEGLNPRQGKKSDQAHP
PIHPIKYAGNLNNENERKLYEFIVRHFLACVSKDAQGYETVAEIEIQEEGFVASGLQIVA
RNYLEVYPYERWSDRSLPQLNEGQRFIPTSITMDEGETSPPQLLSEADLISLMEKHGIGT
DATHADHIETIKTRQYAGVQGDGRFLPCSLGMGLVQGYDAMGIALSKPNLRAELEADLKR
VCDGERNPNDVLREQIERYRRVFVQAMEQVIKIDEALSTFFNEERQEAPPMIPEGGPDAN
LPYRKCPACNLDMTLRRRKDNGFFFSCMGFPECKTAVWLPAAVQQVEVDAEKCNACPSHP
PLLRFQFTPGVYAPFYPDTHRGCIGGCDPNFMELLGIRPLATQPRNQNNTQPSNTRVAND
SGNSSGYASGSQYSANSSRSSASTLPRPQVQPRPMAPARSARPPIPAAFSGATQPNIPSQ
PYFRQPVPHPPSRSDNNNGDSAIVCKCRDAPDALLLTVRKEGPNTGRQFYKCAKQQDGCD
FFLWADAANVPAPAAQNGRGGAGEAVFRQPTARNERRDNEDSETYCDCDGGGRELATTRT
TQKPGPNCGRQFYCCAKPREAQCNFFKWMDDTGASGSGFAQDSRGGSNQDTGSRGRGRGR
GRGRGKSSDPSSTTERRARKCGNCGQEGHTRNHCPDFA
NT seq
3177 nt
NT seq
+upstream
nt +downstream
nt
atgttattattttctcatttcaaattgtcggggattaaacacgtttctttgaatctttta
gagtttactagatgttgtaaaacaactgccgtattagcagagtcttgtaaaatggtccag
gtgcttaatgtagcagagaaaaacgatgctgccaaaaatattgctgaactcctttctcgc
ggtcgtgcaaatcgtagagaaggcagaagcaaattcaacaaaatctatgagtttgaacat
aatcttttcaaccaaaatgtcaaaatgtcagttacttcagtatctggtcatcttctatct
tctgactttgttggaaattataaaaagtggcagggagttaatcctgttactttgtttgaa
gctccaattcataaatttgttgccgatgactatcaaaacatcaaaagaactttggaggaa
gaaaccaaaaagagcaaatacctgatcatttggaccgattgtgatagagaaggtgaaaat
attggctatgaagtaatcacagtatgtcaggcaatcaagcctagcattcaagtgttcaga
gcaaagttctctgaaataacataccaatcaattgctcgagcacttcaaaatttgggcccc
cctaacaaaaatgtcagtgatgcagtggatgttagaattgagttggatcttagaattggt
gctgcatttacaagatttcaaactctacgacttcaaaaagtcttcccagaatcacttggc
caatctatgatcagttatggttcgtgtcagttcccaactctaggctttattgtcgagcga
tataaagccatacaggattttgtgagagagaatttttggaaactcaaagttgtctgggag
ctgaacaaggaagagcgcgtggaattcctttggaaaagacaccatttgtttgatcaaact
gtggttcaaataatccttgaaaaatgccaggagaaccctgaagctgaaataatcaaagtt
caaacaaagaataaaagcaaatggagacctttgcctttagacactgttgaacttgaaaag
ctagcatccaggaaactgcgaatcaatgccaaggaaacaatgaagattgccgagaaattg
tacactcaaggattcatcagttatccacgtaccgaaacaaatatctttcccaaagagttg
gacctgactcctttggtccagtgccagacggttgatcctgcttggggaggattcgctcaa
cgcgttttggacgaagggctgaaccctcgccaggggaagaaaagtgatcaggcccatcct
cccattcatccaataaaatatgcaggaaatttaaataatgagaatgaacgcaaactttac
gagtttatcgttcgccattttttagcttgcgtcagtaaggatgcccagggttacgaaact
gtggccgaaattgaaattcaagaagaaggcttcgtcgccagtggattgcaaatagtagca
agaaactatttggaagtatatccgtacgagcgctggagtgatcgtagtcttcctcaactc
aatgaaggccagcgctttatcccgacatcgataaccatggatgagggagaaactagtcca
cctcaactgttaagtgaagctgatttgatttcattgatggaaaaacatggaattggtact
gacgccacacatgctgaccatattgagacgatcaaaacgcggcagtacgctggcgtacaa
ggcgacggacgcttcttaccgtgttcattgggtatgggactcgtacagggttatgacgcc
atggggatcgcactttcaaagccaaatcttagagctgaactcgaggctgatcttaaaaga
gtttgcgatggagaaaggaatccgaatgatgtcttgagagagcagattgaaagatacaga
agggtgtttgtacaagcaatggaacaggtcatcaaaatcgacgaggctctttcgacgttc
tttaatgaggaacgacaggaagcaccacccatgattcctgagggaggaccagatgcaaat
ttgccttaccgaaagtgccctgcttgtaacttggacatgactctgcgacggagaaaggac
aacggtttctttttctcttgtatgggctttcctgaatgtaaaaccgccgtgtggctgcca
gctgctgtacagcaagtggaagttgatgcggaaaagtgtaacgcgtgtccttctcatcca
cccctattgcggttccaattcaccccgggagtttacgctccattttacccggatactcat
cgcggttgtatcggtggatgcgacccaaactttatggaacttctaggaatccgtccgttg
gcaacacaaccccgaaaccaaaacaacactcagccgagtaacactagagttgccaatgat
tctgggaattcttctggttacgcttccggatctcagtattctgcaaatagctcccgttcc
tctgcttcgactcttcctagacctcaagtccagcctcgtccaatggctcccgctcgaagt
gctcgaccgccaattcctgcagcgttctctggagccacccaaccgaatatcccttcacag
ccgtacttccgtcaacctgtgcctcatccgccatcaagatctgataacaacaacggggac
tctgcgattgtatgcaagtgcagggacgcacctgatgctttgctcctaacggttaggaag
gaaggtcccaacacgggtcggcagttttacaaatgtgcaaaacaacaggatggctgtgat
tttttcctttgggccgatgctgccaatgtaccggcaccagctgctcaaaatggtcgtggt
ggggcaggagaagcagttttccggcagccgactgcccggaatgagcgacgtgataacgaa
gattcggagacttactgtgactgtgacggagggggtcgtgaattggccacgacaagaaca
actcaaaaaccaggaccaaattgtgggcgtcaattttattgttgcgccaaaccgcgtgag
gcacagtgcaatttcttcaagtggatggatgacaccggcgctagcggaagcggatttgct
caagactcccggggaggatcgaatcaagacacgggttctagaggaagagggcgaggaaga
gggcgcggtcgtgggaagtctagtgatccgtcatccactaccgaaagaagagcgaggaaa
tgcggaaactgcggtcaagaaggtcacactagaaatcattgtccagattttgcctaa
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integrated database retrieval system
