Daphnia pulicaria: 124340833
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Entry
124340833 CDS
T08670
Name
(RefSeq) chromatin-remodeling complex ATPase chain Iswi-like
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
dpz
Daphnia pulicaria
Pathway
dpz03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124340833
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpz03021
]
124340833
03036 Chromosome and associated proteins [BR:
dpz03036
]
124340833
Transcription machinery [BR:
dpz03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
124340833
Chromosome and associated proteins [BR:
dpz03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
124340833
RSF complex
124340833
WICH complex
124340833
B-WICH complex
124340833
NORC complex
124340833
BRF complex
124340833
NuRF complex (fruit fly)
124340833
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
HAND
Helicase_C
ResIII
DEAD
HDA2-3
DBINO
TPR_15
DUF4800
Spo16_C
Motif
Other DBs
NCBI-GeneID:
124340833
NCBI-ProteinID:
XP_046649511
LinkDB
All DBs
Position
5:5481994..5486309
Genome browser
AA seq
1037 aa
AA seq
DB search
MSKSEEESSPMETPADTGENSQTESSSRSSLSKGKDDFDKKTEVDRSKRFDYLLKQTELF
GHFMAAPGTKAPSSPLKLKPGRPRKEKKIAEAGDNRHRKTEEEEDEELMEEVKAAEKAAL
VTRFDTSPFYIKGGEMRDYQVRGLNWMISLYENGINGILADEMGLGKTLQTISLLGYMKH
YRNINGPHMVIVPKSTLANWMNEFKKWCPTLRAVCLTGDQETRANIVRDEIMPGEWDACV
TSYEIVMKERAVFKKFNWRYMVIDEAHRIKNEKSKLSEIVREFKTSNRLLITGTPLQNNL
HELWALLNFLLPDIFNNSEDFDEWFNANNCLGDDSLIHRLHAVLRPFLLRRLKAEVEKRL
KPKKEVKVYIGLSKMQREMYTKILMRDIDIVNGAGKLEKMRLQNILMQLRKCCNHPYLFD
GAEPGPPYTTDEHIVYNCGKMVILDKLLPKLKAQGSRVLIFSQMTRMLDILEDYSLWRGY
NYCRLDGSTPHEDRHRQIEEYNAPDSKKFLFMLSTRAGGLGINLATADVVVLFDSDWNPQ
MDLQAMDRAHRIGQLKQVRVFRFITDNTVEEKIVEKAEVKLRLDKLVIQQGRLLDKTNSA
LNKDEMLNMIRHGADHVFASKDSDITDEDIESILAKSENRTQEVAERLEKLGESSLRNFT
LDAPTESVYQFEGEDYREKQKSIVGAWIEPPKRERKANYAVDAYFREALRVTEPKAPKAP
RPPKQPIVQDFQFFPPRLFELLDQEIYHYRKTVGYKVPRNPELGAEAAKVQREEQRKIDE
AEQLTDDEQAEKESLLTQGFISWTKRDFNQFIKANEKYGRDDVEYMTKEVEGKTPEEVME
YSAIFWERCHELQDIDRIMAQIERGEAKIQRRTSIKRALDTKMSKYRAPFHQLRIAYGTN
KGKNYTEEEDRFLVCMLHRLGFDKENVYEELRAAVRSAPQFRFDWFLKSRTAMELQRRCN
TLITLIEREVQEWEEKEKVDKKKRGPKTSIGSKVEATPKLEDDGAKSEATPTKGSKRKSE
SAVGTPETKGRGKKKRT
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaatcagaggaggaaagtagccctatggaaactccagctgatactggcgaaaat
tctcaaacagagtcttcatcccgatcatccctttctaaaggcaaagatgactttgacaag
aaaacggaagtggaccgtagcaagaggtttgactatctcttgaaacaaactgagcttttc
ggtcatttcatggcagctccaggaaccaaagctccatcaagccccttgaaactgaaacca
ggaagaccccgcaaagaaaagaaaatagcagaagcgggagataacagacatagaaagact
gaagaagaagaagatgaggaattgatggaggaagtcaaggctgctgagaaagctgccctt
gttacacgctttgatacatcaccattttacatcaaaggcggtgagatgagggactatcaa
gttcgtggtctcaattggatgatttcattgtatgaaaacggcattaatggtattctggct
gatgagatgggtctgggaaaaacccttcagacaatctctttgttgggatacatgaagcac
taccgcaacattaatggacctcacatggttattgtaccaaaatcaacacttgccaattgg
atgaatgaattcaaaaagtggtgccccacccttcgtgccgtgtgcctcactggagatcaa
gaaacaagggccaatatcgttcgcgatgaaatcatgccaggtgaatgggatgcatgcgtt
acctcctatgaaatcgtcatgaaagaacgagctgtattcaagaagttcaactggcgatac
atggttatcgacgaagcacatcgtatcaaaaacgaaaaatccaaactttcagaaattgtc
cgcgagttcaaaacatctaaccgtctactgatcaccggaacacctcttcagaacaacttg
cacgaactctgggctctacttaactttcttttgccagacatcttcaacaattcagaggat
ttcgatgaatggtttaacgccaacaactgtcttggagacgattctctgatccatcgtctg
catgccgttctacgacctttccttctccgtcgtcttaaggccgaagtagaaaaacgactg
aaacctaagaaggaagttaaagtctatatcggccttagcaagatgcagcgtgagatgtac
accaagattttgatgagagatattgatattgtgaatggtgccggaaagttggaaaagatg
cgtcttcaaaatattcttatgcagcttcgcaaatgttgtaaccatccttacctgtttgac
ggagctgaacctgggccaccctacactaccgatgagcacattgtttacaattgtggcaag
atggttatcttggacaaactgttgcctaaactgaaagcccaaggatctcgtgtgcttatt
tttagccaaatgacccgtatgttggacatcttagaggattattccctctggagaggttac
aattactgtcgtctcgatggcagcactcctcacgaggatcgacatcgtcaaattgaagag
tataatgcaccagacagcaagaagtttttatttatgctttctactcgtgctggaggtttg
ggtattaacttggccaccgctgacgttgtcgtactttttgactcagattggaatcctcaa
atggatcttcaggctatggatcgagcccatcgtatcggtcagctgaagcaggttagggtg
tttcggttcatcacagacaatacagtggaagaaaagattgttgagaaggccgaagtgaaa
ttgcgtcttgacaaattggttattcaacaagggcgattacttgacaaaaccaacagcgcc
ctcaacaaagatgaaatgctcaacatgatcagacacggagcagatcacgtttttgcctcc
aaagactccgacatcacagacgaagacatagaatctattttagccaaaagcgaaaacaga
acacaagaagttgctgaacgtctcgagaaactcggagaatcatcgctccgtaatttcact
ttggacgccccaacagagtccgtctaccagttcgaaggcgaagactatcgagagaaacaa
aagtcgattgttggtgcctggattgaaccgcctaaacgtgagcgtaaggccaactatgcc
gtcgatgcatattttagggaagctcttcgagttacagaacccaaagctcccaaggctcct
cgaccacctaaacaacccatcgtgcaagacttccagtttttcccgccacggctatttgag
ttgcttgatcaagagatttatcattaccgtaaaacggtcggctacaaggttccacgtaac
cctgagctgggagctgaagctgccaaagtccaacgagaggaacaaaggaagattgatgaa
gccgagcaactaacggacgacgagcaggcggagaaggaaagtcttttaactcagggtttt
atatcgtggacgaagcgggacttcaaccagtttattaaagcaaatgagaaatatggccga
gatgatgttgaatatatgacaaaagaagttgaaggtaaaaccccagaagaagtgatggaa
tacagtgcaattttctgggagcgatgccatgagctgcaggatattgatcgaatcatggct
caaattgagcgcggcgaagccaaaatccaacgccggacgtcgatcaagagagctctcgat
actaagatgtcaaagtatcgagcaccgttccatcaattgcgcattgcttatggaactaac
aaaggcaaaaattacactgaagaagaagatcgctttctggtttgtatgctgcaccgtcta
gggtttgacaaagagaacgtgtacgaagagctgcgagccgctgttagatctgctccgcag
ttccgcttcgattggttccttaaatcgcgcacagctatggagttgcagaggcgatgcaat
actctaattaccttaatagaaagagaagttcaagagtgggaggaaaaggagaaagtagac
aagaagaagcgtggtccgaagaccagcattggatctaaagttgaagcaactccgaaatta
gaggacgatggagccaaaagtgaagcaacgcctacgaagggctccaaacgcaagagcgaa
tcagcggttggtacaccggaaacaaaaggacgaggaaagaaaaagagaacttga
DBGET
integrated database retrieval system
