Daphnia pulicaria: 124340840
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Entry
124340840 CDS
T08670
Name
(RefSeq) glutamate [NMDA] receptor subunit 1-like
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
dpz
Daphnia pulicaria
Pathway
dpz04080
Neuroactive ligand-receptor interaction
dpz04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
124340840
04082 Neuroactive ligand signaling
124340840
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dpz04040
]
124340840
Ion channels [BR:
dpz04040
]
Ligand-gated channels
Glutamate (ionotropic)
124340840
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
CaM_bdg_C0
SBP_bac_3
Ion_trans_2
DUF4158
Motif
Other DBs
NCBI-GeneID:
124340840
NCBI-ProteinID:
XP_046649524
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All DBs
Position
5:5986755..5991023
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AA seq
1015 aa
AA seq
DB search
MALARLWLCLLMASWTSITTSQAAKITNFTIGAVLNDDRHDTLFREAITELNSDYTLLPV
NATLHSASMRLDPNPIRTALKMCNYLIAQQVYAVIVSHPVKGDLSPATISYTGGFYHIPI
VGISSREAAFSDKNIHVSFLRTVAPYFHQADVWAALLRHFHFWQVMVIHSADVDGYSLLN
RLQTQFQSNDDDGDQREIKIELTKEFAPAELEDFTKELQEMSEGQSRVYLVYANAQDAAI
IFRDAAKFNLTGAGHIWLVTEQALDVPGVPIGSLGLQQMHAANEAAHIRDSLYLLSSALR
EMEVSERDMTEPPQDCNSSGAIWETGRIYFEYIKKQVLLNGLTGKIAFDDNGDRLFSEYD
IVNVDHPNGRTKVGQYFYSKYQSVLKLSVNDSEITWPGGLRHKPEGFIIPTFLKVMTIVE
QPFVYARRVSDASGESCLAADGEVACPWFNNTADSSGTDRFYCCRGYCIDLLKELARKNN
FTYSLALSPDGQFGSLSPKNGTGKKEWNGLIGELVNDRADMIVAPLTINPERAQVIEFSK
PFKYQGITILEKKQPKSSTLVSFLQPFRDTLWILVMVSVHVVALVLYLLDRFSPFGRFRL
ANAENTEEDALNLSSAIWFAWGVLLNSGIGEGTPRSFSARVLGMVWAGFAMIIVASYTAN
LAAFLVLDRPKTSLSGINDPRLRNPMENFTYATVRGSAVDMYFRRQVELSNMYRTMEGNN
YPTAEEAIEAVKEGKLKAFIWDSSRLEFEAAQDCDLVTAGELFGRSGYGIGLRKGSPWTD
VITLSVLDFHERGFMEDLDERWIKLGSGQQCEHDEKTPATLGLKNMAGVFILVAAGIVCG
VGLIFIEIMYKRHQIRRQRRMELARHVTDKWRTMVEKRKNLRMALETQRSRLKSNGKVND
MGGQITNRRVGGVGGNKLAAISNVASSTRAITSNASSTADGPLSTLTPGNMMEMQYYNPS
AAGGATGLLPVGIPSGGGGGGNRRSKWSRGSSVEVSDQQPAVVCGRSGLYVDFTV
NT seq
3048 nt
NT seq
+upstream
nt +downstream
nt
atggcgttggctcggttgtggttgtgtctgctcatggccagctggaccagcatcaccacc
agccaggcggccaagatcaccaatttcaccatcggtgccgtgctgaacgacgatcgacat
gacactctcttccgcgaagcaattactgaattgaatagtgattacactttacttccggtc
aacgctacgttgcacagcgcttcgatgcggctcgaccccaatcccatccgcaccgctttg
aaaatgtgcaattacctgatcgcccaacaggtgtacgcggtgattgtttcccatccggtc
aagggcgacctgtcgccagccaccatttcctacacgggcggattctatcacattcccatc
gtcggaatcagttccagggaggccgccttctccgacaaaaacattcacgtttcattcctg
aggacggtggcgccatacttccatcaggcggacgtgtgggcggctctgctgcgccacttt
catttctggcaggtgatggtcatccacagtgcggatgtcgacggctattcgctgctcaac
cgactgcagacgcaatttcagagcaacgacgacgacggcgaccagcgtgaaatcaaaatt
gaattgaccaaggaattcgctccggcggaattggaagatttcaccaaggaattgcaggag
atgagcgagggacagtcgagagtttacctggtctacgccaacgcccaagatgcggcgatt
atcttccgcgacgccgccaaattcaatttgaccggagccggacacatttggctggtgacg
gaacaagcgctggatgtcccaggtgttcccatcggatccctaggcctccagcagatgcac
gccgccaacgaagcggctcacatccgcgacagcttgtatctgctgtcatcggccctgaga
gaaatggaagtgtcggaacgtgacatgacggagccgccgcaggattgcaacagctccggg
gccatttgggaaacgggtcgcatttatttcgagtacattaagaaacaagttttacttaac
ggactgacgggcaaaatcgcattcgacgataacggcgaccggcttttctccgagtacgac
attgtcaatgtcgaccacccaaatggacgcaccaaagtcggccaatacttttattcaaag
tatcagagcgttttgaaattgagcgtcaacgacagcgaaatcacatggccgggcggattg
cgccacaagccggaaggatttataattccgacgttcctgaaagtgatgacgattgtggag
cagccgttcgtctacgcccgtcgagtcagcgacgccagcggcgaatcttgtctggccgcc
gacggcgaagtggcctgcccgtggttcaacaacacggccgactcttccggcacggatcgc
ttctactgctgccggggctactgcatcgacctgctcaaagagctggcccggaagaacaac
ttcacttactcgctggccctgtcgcccgacggccagtttggcagtctgtcgcccaaaaac
gggacgggcaaaaaggagtggaacggactgattggcgaattggtcaacgaccgggccgac
atgatcgtcgcacctctgaccatcaatccggaacgggcccaagtgattgaattcagtaaa
ccctttaaatatcaaggcatcaccatcctggagaaaaagcaaccgaaatcgtcgactttg
gtgtctttcctgcaaccgttcagagacactttgtggatcctggtgatggtctcggttcac
gttgtcgccctggtcctttacctcctggatcgattttcacctttcggtcgattccggttg
gccaatgcggaaaacacggaggaagacgctctgaatttgtcgtcggccatttggttcgcc
tggggggtgctgctcaattccggaatcggcgaaggaactcccaggagcttttcggcccgc
gtcctgggcatggtctgggccggattcgccatgatcatcgtggcttcttacacggccaat
ttggccgctttcctcgtcctggatcgacccaaaaccagtctctccggaatcaacgacccc
aggttgaggaatccgatggagaatttcacttacgccacggtgaggggctcggctgtcgac
atgtacttccgccgccaggtggaattgtccaacatgtaccggaccatggaaggaaataat
tacccgacggccgaggaagccatcgaggccgtcaaagaagggaaattgaaggccttcata
tgggacagttcacgactggaattcgaagcggcccaggattgcgatctggtgacggccgga
gaattgtttggacgttccggctacggcattggacttcgcaaaggttctccgtggacggac
gtcattactctgtccgtcctggactttcacgaaagaggattcatggaggatcttgacgag
cgctggattaaattggggagcggccagcagtgcgagcacgacgaaaagacgccggccact
ttgggactgaagaacatggccggcgttttcattttggtggcggccggaatcgtctgcgga
gtcggattgattttcatcgagatcatgtacaaacgacaccaaatccgtcgccagaggcgc
atggaactggccagacacgtcaccgacaaatggcgcaccatggtcgagaaacggaagaat
ttgcggatggccctggagactcaacgatcccgtctcaagtccaacggcaaagtcaacgac
atgggcggacagataaccaaccgacgagtgggcggagtcggcggcaataaattggcggca
atttcaaatgtggccagcagcactagagccataactagcaacgccagcagcactgccgac
gggccattatcgaccctgacgcccggcaacatgatggaaatgcagtactacaatccgtca
gctgcgggcggggctaccggattgttgcccgtcggcattcccagcggtggaggtggtggc
ggcaatcgccggagtaaatggagccgaggttccagcgtcgaagtgtccgatcagcaaccg
gccgtcgtctgcggtcgatccggtttgtacgtcgatttcaccgtttga
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