Daphnia pulicaria: 124340855
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Entry
124340855 CDS
T08670
Name
(RefSeq) piwi-like protein Siwi
KO
K02156
aubergine
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dpz03036
]
124340855
Chromosome and associated proteins [BR:
dpz03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
124340855
piRNA pathway
124340855
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
Piwi_N
ArgoN
Motif
Other DBs
NCBI-GeneID:
124340855
NCBI-ProteinID:
XP_046649547
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Position
5:complement(5891981..5897200)
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AA seq
927 aa
AA seq
DB search
MDPAGRARGRSRGRGRGDEVETTRRPDLAQQHGIAPYSTQPPHLAGRSRGGMTQESEGRG
HGPPSSFTNTSGSGGRATSGSSSRDTPQEPSYGPSVPGGGRASLAPRGGPAAPPQVPSAR
APPPGVVAPRASGDAAASMGRGASRGREQRDVQIYTRPSAEFVKLGKTGSPLPVTSNYFE
LIKRPDMHLLQYRVDFTPDVDHIGVRKALIRVHENVLGKYLFDGTLLYNVTRLAQPLELH
SKRVSDDSDVMVSFRLVGEIHKEDATYTSVMNIILRRCLGMLNLTMWKRDYYDPAALTEI
PQHFLNVWPGYLTTIRHHEDGFLLGVEIIHKVLRRDTALDVMDRLRQSGGDIQALCKAEL
LGKVVMTHYNKKTYRIDDVDFTKNPRSTFHLRKEDRDVSYMEYYQTRYSLSVRNASQPML
VSLPSRRDKNRGDDQPVYLIPELCGMTGLSDDQKKNFNLMKDVGNITRVMPDKRVDALMK
FRKRLADNPKIQEELNSWGLDFAKNIVSCNARIIPAQTIQQGGNSFPTQEGDWSRNIQRS
RMCVSVELQDWVVFTPSAMMQEITPFVNMMKQVGAQQGFNIPQPEYINMQMDRTSNYVEA
IRAECGRKQFSLIFCVLRAARADTYASIKKMTISEFGIPSQVITGRNIKGQPGKLMSIAT
KVMIQVASKLGAEPWRVAVPQTKWMVIGYDTYHDARQRKAVGAFVASINPTFSRYYSSVK
IHENNEEISPSFKDHLFGALKSYYIMNEKTLPEKIIVYRDGVGAGDIARLKDTEVAALRE
ACSDAGARTNYLGTGVYNPPIAFIVVSKRINTRFFAMGQRGASNPPCGTVVDNKVTLNER
FDFFLVSQKVTQGTVSPTSYNVIEDDTGIAPDIHQRLAYALTHLYYNWPGTLRIPAPIQY
AHKLAYLVGESMMTQPHEGLNRLPYYL
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atggatcctgctgggcgtgcacgaggtcgttcacgtggtaggggtcgtggagatgaagta
gaaacgacaaggagacctgacttggctcagcaacatggaatcgcgccctattcaacacag
ccaccacacttggctggacggtcaagaggaggtatgacacaggaatccgaaggccgaggt
catggaccaccatcttcattcactaacacatctggatcagggggtcgagctacaagtggc
tcctcaagtagagatacgcctcaagaaccatcttatggtccaagtgtacctggtggtgga
cgagcttcattggcccctcgtggtggtccagctgcacctccacaggttccttccgctcgc
gcacccccaccaggtgtagtagccccaagggcctctggggatgctgctgccagcatggga
cggggtgctagtcgtggacgcgaacagagggatgtgcagatttatactcgcccttcggct
gaatttgttaaattaggaaaaacgggaagtcctctcccagtgacttcgaattattttgag
cttatcaagaggccagatatgcacttgcttcagtatcgtgttgatttcactcctgatgtt
gatcatattggtgttcgtaaagccctcatccgtgttcacgaaaatgtgctcggcaagtat
cttttcgacggcactctactgtataatgttactcgtctagcacagccactggaactgcat
tccaaacgcgtctcggacgattctgatgttatggtcagtttccgtcttgtcggagaaatt
cacaaagaagacgctacctacacttcggtcatgaacattattttacgccgttgccttggc
atgcttaatttgactatgtggaaacgtgattattatgacccggcagccttgactgaaatt
ccgcaacatttcttgaacgtatggcccggctacctgactactatccgacatcacgaggat
ggatttcttcttggtgtagagatcatccataaagttttgcgtcgagatactgccttagat
gttatggatagattgcgtcaatctgggggtgatattcaggcactgtgtaaggcggaactg
ctaggaaaagttgtcatgacgcattacaacaaaaaaacttaccgaattgacgatgtcgac
ttcaccaaaaaccccagatcaaccttccacctgcgcaaagaagaccgtgatgtttcgtac
atggaatattaccagacgcgttatagcctttcggtgaggaatgcttcccagccaatgtta
gtttcactcccttcacgacgagataaaaatcgaggcgacgaccaaccagtgtacctcatt
ccagaactgtgcggcatgacgggtctcagtgatgaccaaaaaaaaaatttcaatttgatg
aaggatgtcggtaatattacgcgagttatgccagataaacgtgttgatgccctcatgaag
ttccgcaaacgactggccgataatccaaagattcaagaagagcttaacagttggggtctc
gactttgccaaaaatattgtctcttgcaatgcgcgtattattcctgctcaaacgattcaa
cagggtggtaacagttttccaacacaagaaggagactggagtcgtaatattcagcgatcc
aggatgtgtgtgtcagtggaattacaggattgggttgtatttacgccgtcagcaatgatg
caagaaatcacacccttcgttaatatgatgaagcaagttggagctcaacagggttttaat
atcccgcaacctgaatatattaatatgcaaatggaccgtacgtcaaactacgtcgaggct
attcgagcggaatgtggtcgaaagcaattcagccttattttttgcgtgttgcgtgctgca
cgagcagatacgtatgcttcaatcaagaagatgacgatctcagaattcggcattccatct
caggtgattacgggaagaaatatcaagggacagccaggtaagctcatgtcaatcgccacc
aaagttatgattcaagttgcttcgaagttgggtgcggaaccttggagagttgcagtcccc
cagacgaaatggatggttatcggctatgatacgtaccacgatgcacgccaaagaaaagct
gtcggtgcatttgttgcatccatcaatccgaccttctcgcgttactattcttctgtgaaa
attcacgaaaacaatgaagaaatttcacccagcttcaaagatcatctctttggcgcactc
aaatcttattacatcatgaacgaaaaaacattgccggaaaaaatcattgtctaccgtgac
ggtgtcggtgctggagacattgcgcgactaaaggatacggaagtggcggcactgagggag
gcttgttccgatgctggtgctcgaacaaattacctcgggactggtgtgtataatccaccc
attgcattcattgtcgtaagcaagcggatcaacacgcgatttttcgccatgggacaacgt
ggagcgagcaacccgccttgcggcacggttgtcgacaataaagtgacgctcaatgagaga
ttcgacttcttcctggtgtctcaaaaagttacgcaaggtaccgtttctcccaccagctac
aatgttattgaagatgacactggaatcgcccctgatatccaccagcgactggcttatgct
cttacccatctttactacaattggcctggtaccctgcgtattccagcgcccatccagtat
gcgcacaagttggcgtaccttgttggtgaatcaatgatgacgcaaccgcatgaaggactg
aatcgacttccttattacctttga
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