Daphnia pulicaria: 124340862
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Entry
124340862 CDS
T08670
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
dpz
Daphnia pulicaria
Pathway
dpz04137
Mitophagy - animal
dpz04140
Autophagy - animal
dpz04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124340862
04137 Mitophagy - animal
124340862
04148 Efferocytosis
124340862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpz03000
]
124340862
Transcription factors [BR:
dpz03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
124340862
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_11
PAS_3
PAS
PAS_9
PAS_4
HLH
PAS_2
PP-binding_2
Motif
Other DBs
NCBI-GeneID:
124340862
NCBI-ProteinID:
XP_046649561
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Position
5
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AA seq
897 aa
AA seq
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MATRAPKEKRRNSEKRKEKSREAARCRRSKESEIFTDMANLLPVPSSLSSQLDKASIMRL
TIAFLKAQSLLGNSVQELCSLWNEDKCSMADACWPQALGGMLLALSSEGDIIYLTENVTQ
QLGLPQVDLIGQSIYDYCHPCDHDELREVLSLRPDGELARSFFLRLKSTLTAKGRSNNNL
KAASYKVMNCSGRIVLATASSVRNSYSQEGVFNEDDDLATEDDLEVEKAIKSPTSHFLVV
VGDPIPHPSNIEMPLDSYTFLTKHTLDMKYTYVDEKIYEFLGYMPEDLEGHSAYQLHHAQ
DNESILKSYKTMFTKGQIQTPPYRFLARHGGYAWVQTQATLVYGNRDSRPQAVVCVHTCL
SEIEDGDQILFVSQAEASATGLVQRPLVAAPAPSRKMPNEWLPQNMTSKLFVPKTAEMDE
GFLIFDKLKGTSILKEEPEDLTHLAPVAGDSCIPLDMPSIAFPSDLFDVEQLTPEFFDCL
PLTGFDIPLLIEPEELIEADDNGAIEQADFSAPPVSIKREDPFIFFDNQSAIPLVNSSSN
LSSPIPSISSAKEDYDEEFPIEYSPIPSFMDETFMGGCSVQSSISPIEDEEELDRRAPYI
SMSESDDLPLFDPSELFSGLDLECLPMQKCDLDFGETDQSVLVKLLQQSGGLPKMAGTPP
TTFDSLPLLSKGTTNMAPTSVYHTDTHSIVYQAQKRSSMGPADDSNPKRMKAPTLKMPNS
GPLATRVTPLKPSRGATSSLMDLLTERPTGHSQQPLSHQTSSVLQNLLVSGHDLQTGHDL
QKRHSSFSCKAVTSSCFVSLLPSSPRLSLEKGQPLLKKQMMMQQEHDYGGGLDSSSDTGS
DLDTKVRHPRAFSCLNTFPFDMDVSPCSSVSLDIDSSDFFDTLNLSAEFVATDGATE
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggcgactcgcgctccaaaggaaaagaggcggaactctgagaagcgcaaggagaaatcc
cgtgaagctgcacgctgtcgcaggagtaaagaatcggagatctttaccgatatggccaat
ctactccccgtacccagtagtctcagctctcaattggacaaagcttctatcatgaggctg
actattgcttttctcaaagcacagtctctccttggcaacagtgtccaagaactgtgcagt
ctgtggaatgaagacaaatgctcgatggctgatgcttgttggccccaagcactggggggc
atgttattggctctatcgtccgaaggggatatcatctacctgactgagaacgtaacccag
caactgggacttccacaggtggatctgattgggcaaagcatatacgactattgccatccg
tgcgatcatgatgaacttcgcgaagtgctttcgctccgtcccgatggtgaattagcgcgc
tcctttttcctccgcctcaagtcgacattaacggctaaaggacggagtaataataacctg
aaagccgcctcttacaaagttatgaactgttcggggcgcattgtgctggcgacggcgtca
agtgttcgaaacagctattctcaagaaggagttttcaatgaagatgatgacctagcaact
gaagatgatttggaagtggaaaaggccatcaagtctcctactagccattttttggtggtg
gtcggcgatccaatcccgcacccatccaacatcgaaatgccattggacagctacactttt
ctcaccaaacacactttggacatgaagtacacttacgtcgatgaaaagatctacgaattt
ttgggttacatgccggaggatttagaaggccattcagcgtaccaattacatcatgcgcag
gataatgaatccatactcaaaagttacaaaacgatgttcacgaaaggacagattcaaact
ccgccgtatcgatttttggcaagacacggaggttatgcttgggtgcagactcaagcaact
cttgtttacggcaatcgagattccagaccacaagcagtggtgtgcgtgcatacttgtttg
agtgaaattgaggatggggatcaaatcctcttcgtcagtcaagctgaagcatcagccact
ggtctggttcaacgcccattggttgcggctcctgcgccatcacgaaagatgcccaacgag
tggctgccgcaaaatatgacatcaaagctatttgtacctaaaacggctgaaatggacgaa
ggtttcctcatcttcgacaaactcaaaggcaccagtattttgaaagaggagcctgaggat
ttgacacatttggcccccgttgctggggacagttgcatcccattagacatgccgtcaatc
gcttttcctagtgacctttttgacgtcgagcaactgacgcccgagtttttcgattgtctg
ccgctgacgggatttgatattcctttgctgattgaacctgaggaattaatcgaggccgat
gacaatggtgcaattgagcaagcggacttttccgctcctccagtgtcaataaaaagagaa
gatccattcatttttttcgataatcaatcggccatccccctggtgaatagttcaagcaac
ttgtcgtctcctataccatcaatctcatcggccaaggaggattacgacgaagaattcccg
atagaatattcgcctattccgtcttttatggatgagacatttatgggcggatgttcagtg
cagagttcgatatctccgatcgaagatgaagaagagctggatcgaagagctccttacatt
tccatgagtgagagcgacgatttgcccttgtttgatccatcagagttgtttagtggcttg
gatttggagtgtttaccgatgcagaaatgtgatttggattttggcgaaaccgatcaatct
gttctcgtcaagcttttacaacaaagcggtggtctgccaaagatggctggcactccgcca
actacatttgactctctgccacttttatcgaaaggcactacaaatatggcgcctacatcc
gtgtatcacacggatacacattctatagtgtatcaagctcagaagcgctctagtatgggc
cctgccgacgattcgaatccaaagcgaatgaaagccccgactttgaagatgccaaatagt
ggacctctggctacccgagtaaccccattgaaaccgtcaaggggcgccacgtcgagccta
atggatttgttaacggagaggcctacgggccattcgcagcagcccttgagccatcaaacg
tccagcgttctccaaaacttactggtcagtggtcatgacttacaaaccggtcacgatctg
cagaagaggcactcttccttctcctgcaaagctgtcacctcttcttgctttgtttctctt
ctgccttcttctcctcgactttcattggaaaagggccagccattgctgaagaagcaaatg
atgatgcagcaggaacacgattacggtggtggactcgattcgtcaagtgacacggggagt
gacttggacacgaaagtccgtcatccgagagcgttcagctgtttgaacactttccctttt
gatatggatgtgtcgccgtgttcatcggtttcgctcgacattgactctagcgatttcttt
gacacgttaaatttgtccgccgaattcgttgctacggacggtgcaaccgagtga
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