KEGG   Daphnia pulicaria: 124340871
Entry
124340871         CDS       T08670                                 
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1-like isoform X1
  KO
K18643  katanin p80 WD40 repeat-containing subunit B1
Organism
dpz  Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:dpz00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:dpz04812]
    124340871
Cytoskeleton proteins [BR:dpz04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulin-binding proteins
    Microtubule severing proteins
     124340871
SSDB
Motif
Pfam: WD40 Katanin_con80 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd EIF3I WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_SCAP WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_DCAF4 Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_SPT8 Beta-prop_HPS5 Beta-prop_TEP1_C Beta-prop_IFT122_1st eIF2A Beta-prop_RIG_2nd Beta-prop_Vps41 WD_LRWD1 Beta-prop_NWD2_C Beta-prop_WDR19_1st PROPPIN Beta-prop_RIG_1st Beta-prop_NOL10_N Beta-prop_VPS8 WD40_RFWD3 Ge1_WD40 Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 124340871
NCBI-ProteinID: XP_046649575
LinkDB
Position
5:3102146..3110497
AA seq 874 aa
MATTTKRAWKLQEFSAHGANVNCLALGSKSGRVLVTGGDDKKVNLWAIGKPSCIMSLSGH
TTAIEAVRFSPTEELVCAGSAAGAVKVWDLEAARMVRTLTGHRAGIKALDFHPYGDFLAT
GSTDTNMKLWDIRRKGCIFTYKGHSSTVNSLRFSPDGQWVASAGDDGYVKIWDLRAGRLL
SELREHTAAVTEVVFHPHEFLLASGAADRRVLFWDLENFTLVSNSDPETSGIRSIYFHPE
GKCLFSAAQDGLRVYGWEPCRILDCIPLPWGRIQDMAVTSGQLIGVSYNLSNVSIYVIDL
KKVAPFGDSLQTSSGLGGGGVGIGGGGGGGTAFQHGVSFRKSFNKERPPGGLRQSQIKMN
HDTIESDEKSSTETEDDGIAADIKDLNHYHNIFQPRGRELSRTPPPLEINSDKESSTVLI
GDKVKLDPAIPQVIRPPPPDLVQQHSPLPTPASGNSPVHRPSPSPSPPFVKTSQSGPGRP
AAGLTTMRERRNSTSSVTLSSNKTITSITSVERESYNLHTPTNLIAMTSPRPDVTHLSGG
PPVLPPTGPHTSRGRNPLRRDLVHRKDSIKEVLQPSLSDPENPPKLNNIRHSPSEPSLNM
RSHSTSRSSSLTRNRPDLTVPTPKARVNSLYSPFMSSQPPMSTHNVHQDFVPIMSDKPSG
LDLEDFMPRKFNSVSMGGGSPSVSGMSSPYEESSSLALEQTEMEIVTNIVQGHQPMMTVL
SSRHRNLQIIYNLWQNKDAKVAVETAVTMNDPAVVVDLLSVIIFRPFLWSLDLCVLLLPA
IADLLQSKFEVYVNTACNSLRLVLKNFATVIKSNIETPTQSVGVDISRQERFNKCMSCYS
QLVPIKAFVLKRQAMAGKMGQTFRELHILLQVFD
NT seq 2625 nt   +upstreamnt  +downstreamnt
atggctacgacaacgaaaagagcgtggaaacttcaagagttttctgcccatggagccaat
gtgaattgcttggccttaggaagcaagtcaggacgagtcttggtcaccgggggagatgac
aaaaaagtcaatttatgggcaattggcaaaccatcatgcatcatgagtctgagtggccat
acaacggctattgaagcggtgagattctctccaacggaagaattggtgtgcgcgggaagc
gctgctggagctgtcaaggtgtgggatctggaggcggcgcggatggtgcgcacgctgact
gggcatcgggctggcatcaaagccctcgatttccatccctacggcgactttctcgccact
ggctcaacagacaccaacatgaaactgtgggatattcgacgcaaaggttgcattttcacg
tataaaggacatagttcgaccgtcaatagtctgagattcagtcccgacggtcagtgggtg
gcctcggccggtgatgatggctacgtcaagatatgggacctgagagctggccgacttttg
tctgagttgcgtgaacacacagccgcagtcactgaggtcgtgttccacccgcacgagttc
ttattggcatcgggggccgctgaccgacgcgtcctcttttgggatttggagaactttacg
ttagtctctaattccgatccagaaacaagtggcatcagatcgatttatttccatccggag
ggtaaatgtttattcagtgcagctcaagatggactgagagtatatggatgggaaccttgc
cgtatcctggattgtattccacttccatggggtcgtatccaagacatggccgtcacctct
ggccaattgattggtgtctcgtataacttgagcaacgtgtcgatctacgtaatcgacctg
aagaaagtggcacccttcggtgattctttacagacttcttctggcctcggcggaggagga
gttggcatcggaggaggaggaggcggaggaacggcattccagcacggcgtatcttttcgc
aagagtttcaacaaggagcgaccgccgggcggtttgcgccaaagtcagatcaagatgaat
cacgacacaatagagtcggatgaaaagtcgagcactgagacggaagacgacggcatcgct
gcagacattaaggacttgaaccactaccacaacatctttcaacctcgcggtagagagttg
tctcgcaccccccctccgctcgagatcaattcggacaaagagtcaagcacggtactaatc
ggcgacaaagtgaaactggatccagccattccgcaggttatccgtcctccgccacctgat
ctggttcagcagcattcacctctccctacaccggcatcgggtaatagtccggttcatcgg
ccgtcaccttcaccttcgccacctttcgttaaaacgtcacagagtggacccggaagaccg
gctgcgggtctcacaactatgagagaaagacgaaacagtacatcatcggtaactttgtcg
tctaacaagaccatcacatctatcacgagcgtagaaagagagtcctataacctgcataca
ccgaccaatttaattgccatgacgtctccacgtccggacgtgacccacttaagtggaggc
ccgcccgttttaccgccaactgggccgcatacatcgcgcggccgtaaccccctccgtcga
gatttggttcaccgaaaggattcgattaaagaagtgcttcagccttcgctttctgatcct
gagaatccaccaaaattgaacaacatacgccacagcccttcggaaccttcattgaatatg
cgatcgcattcgacatcacgttccagttctttaactcgcaatcgaccagatctgactgta
cccactccgaaagccagagtcaattcactttattcccctttcatgtcatcacaacctccg
atgagtactcataatgttcaccaggatttcgtcccaattatgtctgataaaccgtcaggc
ctcgatcttgaggattttatgccgcgcaaattcaattccgtgtcgatgggtggtggcagc
ccttcagtatctggaatgtccagtccgtatgaagaatccagttccctggcgttggagcaa
actgaaatggaaatcgtgaccaacattgtccaggggcatcagccgatgatgaccgtttta
agtagtcggcatcgcaatctgcagataatttataatctctggcagaacaaggatgccaag
gtggctgtggagacggcagtaacaatgaacgatccggccgttgtagtagatttgctcagt
gtaatcattttccgaccattcttgtggagtttggatttgtgtgtgttattattacccgcc
atcgccgacctccttcagagtaaatttgaagtatatgtcaacacggcttgcaattcattg
agactggtattgaaaaattttgctacggtgattaaaagcaacatcgagactccgacccaa
tcggttggggtggatatctcacgtcaagaacggttcaataagtgcatgtcgtgttacagt
caattggtgcctataaaagcctttgttctcaaacgtcaagccatggccggcaaaatgggg
cagacgtttcgggagcttcacatcctactgcaggtctttgattga

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