Daphnia pulicaria: 124340912
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Entry
124340912 CDS
T08670
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic-like isoform X1
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
dpz
Daphnia pulicaria
Pathway
dpz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
124340912
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dpz01007
]
124340912
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dpz03016
]
124340912
Enzymes [BR:
dpz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
124340912
Amino acid related enzymes [BR:
dpz01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
124340912
Transfer RNA biogenesis [BR:
dpz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
124340912
Prokaryotic type
124340912
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
124340912
NCBI-ProteinID:
XP_046649667
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Position
5:complement(5108156..5111502)
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AA seq
765 aa
AA seq
DB search
MISRGVWSLSPHLNQFRANISLLAPILHQTFGGRCFPDDFRFSKPRRTLKTSETGEVKGK
PEGKPKSEGKPKVEGKPKESKAKAEVKTSLKELNPWPSYIQDRIALWDKLKAEADAAIAA
KVPSPIQITLPDGKIVEGNSWRTSPFDIASGISAGLAENTVIAKVNGKLWDLDRPLEDSC
TLQLLKFDDEDAQKVFWHSTAHILGESMERCYGGCLCYGPPIENGFYYDMFIQDQQVSNF
DFPVLENVMKAAIKEKQPFERLEMKKEDLLEMFKYNEFKVRILNEKVDTPTTTAYRCGPL
IDLCLGPHVRHTGKIKAFQITKNSSTYWEGKADAESLQRVYGISFPDNKQLKEWQRIQEE
AAKRDHRKLGREYELFFFHELSPGACFFTPHGAHIYNTLVEFLRNEYKQRGFQEVITPNV
YNSKLWLTSGHWQHYSENMFSFEVEKETYAMKPMNCPGHCLLFDHRVRSWRELPLRLADF
GVLHRNELSGALSGLTRVRRFQQDDAHIFCTMGQIKSEINGALAFLRDVYKIFGFTFQLR
LSTRPEKFLGEIETWNHAEKELTESLNEFGETWQLNPGDGAFYGPKIDITIMDALRRPHQ
CATIQLDFQLPIRFNLSFINEAGEKEKPVIIHRAILGSVERMIAILTESYAGKWPFWLSP
RQCVVVPVGPVFDGYAQQVREQIAAAGFRITADIDAGDTMNKKIRNGQLSQHNFILVVGE
KEQTNGTVNIRTRDNKVHGEHTIAKVIERFTQLSKDKTLNSEDSF
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgatttcgcgaggtgtatggtcgctttccccccatttgaatcagtttcgtgcaaatatt
agcctattagcgccaatattgcatcagacatttggtgggagatgttttcccgatgacttc
cggttcagcaagcccaggagaacacttaaaacctcggaaactggtgaggtgaaaggcaaa
cctgaaggaaaaccaaagagtgaaggaaaaccaaaggttgaaggaaaaccgaaagagtcc
aaagctaaggcagaagtcaagacttcgttgaaggagctgaacccatggccctcatacatc
caggaccgtattgccctgtgggataaactaaaggctgaagctgatgctgctattgccgcc
aaggtgcccagcccaatccaaattactttacctgatggaaagattgtagaaggaaactct
tggcgcacatcacctttcgatattgctagtggcattagtgctggtctggcagaaaacact
gtcattgccaaagttaatggcaagctttgggatcttgacaggccattggaagacagttgt
actttgcagctcctgaaatttgatgatgaagatgcgcagaaggtgttttggcactcgact
gctcacattttgggagaatccatggagagatgttatggaggttgcctctgctatgggcct
cccattgaaaacggattttactatgacatgttcatccaagaccaacaggtctctaatttt
gattttccagtgttggaaaatgtcatgaaagccgcgataaaggagaaacaaccctttgaa
cgtcttgaaatgaaaaaggaagatctcttggagatgttcaagtacaacgagttcaaagtt
cgaattctcaacgaaaaagtagatacaccaaccactactgcctatcgttgtggtcctttg
atcgatttgtgtcttggacctcatgttaggcatacaggtaaaattaaggccttccaaatt
accaaaaacagttcgacgtattgggaaggaaaggcagatgctgaatctcttcagcgagtt
tacggtatttcattcccggataacaagcaattaaaagaatggcagaggatccaagaagaa
gcagctaaaagagatcacagaaaactgggcagggaatatgaacttttcttcttccacgaa
ctcagtcccggagcctgcttctttaccccccatggcgcgcacatttacaatacgctcgtt
gaattcctccgaaacgagtacaaacagcgtggatttcaagaagtcatcactccgaatgtg
tacaactccaagttgtggctcacatctggccattggcagcactactcggagaatatgttt
tctttcgaggttgaaaaagaaacatatgccatgaagccgatgaattgccccggtcattgc
ctgttatttgaccatcgggttcgttcttggcgagaattgccgttgcgtcttgcggatttc
ggagtacttcaccgcaatgagttgtcaggagctctctccggtctaactcgagtacgtcgg
ttccaacaagacgacgctcatatcttttgtactatgggacaaatcaagagtgaaatcaat
ggcgccttggctttcctgagagacgtatacaagatctttggatttactttccaactgcgc
ctctctacacgacctgaaaagtttcttggagaaatcgagacctggaatcacgctgaaaag
gaactgactgaaagtttgaacgaatttggagaaacttggcaattgaaccctggcgatggt
gcattttacggtcctaaaatcgacattaccatcatggatgcgttgcgccggccgcatcag
tgcgccactattcaactggactttcagctgccgattcgtttcaatttaagtttcattaat
gaagctggagagaaggagaagcctgtcattattcatcgtgcaatcctcggctctgtcgag
cgtatgattgctatcttaactgaaagctatgccggaaaatggcctttctggttaagtccc
cggcaatgcgtcgtagttcctgtcggacctgtttttgatggctacgctcaacaggtgaga
gagcaaatagcagctgctggattccgtattacggctgatattgatgccggtgataccatg
aataaaaaaatcagaaacggccaacttagccagcacaactttatccttgtcgttggagag
aaggaacagactaatggaacggtcaatatccgtactcgtgacaacaaagttcacggagag
catactatcgccaaggttatcgagcgtttcacccaactatcgaaagataaaaccttgaat
agcgaagattcgttttga
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