Daphnia pulicaria: 124341088
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Entry
124341088 CDS
T08670
Name
(RefSeq) transcription factor collier-like isoform X1
KO
K09103
early B-cell factor
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpz03000
]
124341088
Transcription factors [BR:
dpz03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
124341088
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GFIT
Motif
Pfam:
COE1_DBD
COE1_HLH
TIG
Motif
Other DBs
NCBI-GeneID:
124341088
NCBI-ProteinID:
XP_046649970
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Position
5:complement(5075904..5082626)
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AA seq
455 aa
AA seq
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MPLLPANVHEIHHSMQQIDRKVDFTANMGLPLHTHARGWMPAAMVDQTALGVGRAHFEKQ
PPSNLRKSNFFHFVIALYDRTGQPVEIERSAFIGFIEKDQEPDGQKTNNGIHYRLQLLYA
GGYRQEQDIYVRLIDSVSKQAIVYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETP
SDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVASQVSVDGPLLAVSDNMFVHNN
SKHGRRAKRLEPTDDCGTGVYPALPATPSIKVISPAEGWTAGGSTVVIVGDNFFDGLQVV
FGTMLVWSELISSHAIRVQTPPRHIPGVVEVTLSFKSKQFCKGSPGRFVYVSLSEPTIDY
GFHRLSKLVPRHPGDPEKLGKEIILKRAADLAEAVYANAMPRNNSLNQLSLQQNGSVSSV
SMAPFNSYTSQLGVSVPGDSTNSQGWPEGSGGFYF
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttcttcccgccaacgttcacgagattcatcacagcatgcagcagattgatcgc
aaagttgactttacggccaacatgggcttgccgttacacactcacgctagaggatggatg
cctgcagctatggtcgatcaaactgcattgggtgtaggtcgtgcacatttcgagaagcag
ccgcctagcaacttacgcaaatcgaatttctttcactttgtcatcgccctttacgaccgt
acgggacaaccagttgagattgaacgatcggcttttatcggattcatcgaaaaagatcag
gaacccgatggccagaagaccaataatggcattcattaccgattgcagctactctacgcc
ggcggttaccgacaagaacaggatatttacgttcggttgatcgactctgtttccaaacag
gccatcgtctacgagggccaggataaaaaccccgaaatgtgcagggttctcttaacgcac
gaagtcatgtgcagccgctgctgtgacaagaaaagctgcggcaatcgcaacgagacgccg
tcggatccggtcatcatcgatagatttttcctcaagttcttcctgaaatgcaatcagaac
tgtttgaagaatgccggaaacccgagggacatgcgccgctttcaggttgtcgtcgcttcg
caggtcagcgtggatggtcctttgttggccgtttcggacaatatgtttgttcacaataat
tcaaaacacgggcgtcgggctaagcgtctggagccgaccgatgattgtggaacaggtgtg
tatccagcgcttccggctacacccagcatcaaggttattagcccggcagagggatggaca
gcaggaggttctactgtcgttatcgttggtgacaacttttttgatggtctgcaagttgta
tttggcacgatgcttgtttggagtgagttgatatcgtcgcacgccattcgcgtccagact
ccacccagacacattccgggtgttgttgaggtgacattgtcattcaagtccaaacaattt
tgcaaaggttcaccagggagattcgtctatgtttcgctcagcgaaccaacgatcgactac
ggcttccatcgtctcagcaagcttgtccctaggcatccaggagacccagagaagttgggc
aaggaaatcatattgaaacgggcagctgatttggccgaggcggtttacgccaacgctatg
ccacgcaataacagtttaaaccagctgagtctgcagcagaatggatccgtttctagtgtt
tccatggcgccctttaactcgtacacgtctcagttgggtgtgtctgttccaggcgattcg
accaactcacaaggatggccagaaggaagtggtggattttacttttga
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