Daphnia pulicaria: 124341120
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Entry
124341120 CDS
T08670
Name
(RefSeq) farnesyl pyrophosphate synthase-like isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
dpz
Daphnia pulicaria
Pathway
dpz00900
Terpenoid backbone biosynthesis
dpz01100
Metabolic pathways
Module
dpz_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
124341120
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
dpz01006
]
124341120
Enzymes [BR:
dpz01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
124341120
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
124341120
Prenyltransferases [BR:
dpz01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
124341120
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
SWT1_3rd
DUF2251
Motif
Other DBs
NCBI-GeneID:
124341120
NCBI-ProteinID:
XP_046650013
LinkDB
All DBs
Position
5
Genome browser
AA seq
412 aa
AA seq
DB search
MINIRFYILVRTGAMCQNRMLRSNQLITSTPKLLRKFHSSKTSSVLRRPSSNEQQITERL
NNLLVMTSSCKIKDQFHKFFPEILRCLKSSSTLSELPSMQLWIEKIVEYNLKGGKMNRGL
AVVESFMIFKNDQISEQDIETAIALGWAVEMLQAFFLVADDIMDDSLTRRMKPCWYRTNN
LGVKAFNDSILLESLIYQILSSYCKDRHYYLPILELFHDVTMRTSLGQAMDLHSTPDPNQ
SPDLSKFTTETYDAIVKYKTAYYSFYLPVAIAMRLSGIQDERLFKQAEDILLPMGRFFQV
QDDYLDCFGDPEVTGKIGTDIEDGKCSWLIVTALPLCDSAQRQLIETHYASKDPSSVKLV
KSLYQQLGIPKLYIEYEENSYKQLTQMIEGIKQQLPTSVFQGFMEKIYKRLN
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgattaacatcagattttacatacttgtaaggactggagccatgtgtcaaaaccggatg
cttcgttcaaaccagttaataactagcaccccgaaactcttaagaaagtttcactcgtct
aaaactagttcagttctccgtcgtccctcaagcaacgaacaacagattacggaacgattg
aacaatctactagtcatgacttcttcatgcaaaattaaggatcagtttcacaaattcttc
cctgaaattttaagatgtttgaagagctcatcaaccttaagtgaattgccatcgatgcaa
ctatggattgaaaagattgtcgagtataatttgaaaggggggaaaatgaatcgtggtctg
gctgttgtggaaagcttcatgattttcaaaaatgaccaaatttcagaacaagacatagaa
acagcaattgcacttggttgggctgttgaaatgttgcaggcattcttccttgtcgcagat
gatatcatggatgattctctcacgcgaagaatgaaaccctgttggtatcgcacgaacaat
ctaggtgttaaggctttcaatgattctatactgttggaaagcctaatctatcagatactt
tcgtcatattgtaaagaccggcattactatcttcctatattggaactgttccatgacgtt
acaatgaggacatctcttggccaagctatggatttgcactcaactccagatccaaaccaa
tctcctgatctaagcaaatttacaacggaaacatacgatgctatagtaaagtataaaacc
gcatattactccttctacttacctgtagccattgctatgcgtttgtcgggaatccaggat
gaacgtctttttaagcaagcggaagatattctattacccatggggcgattctttcaagta
caggacgattatttggactgttttggtgatcctgaagtaacgggtaaaatcggcaccgat
attgaagatggaaaatgctcatggcttattgtaacagctctgcccttgtgtgattcagct
cagcgacagttgattgaaacgcattatgcctcaaaagatccttcatccgtgaagctggtg
aagtcgttatatcaacaattgggaatcccgaagttatacattgaatacgaagaaaatagt
tataagcaattaactcaaatgatagaaggaatcaagcaacaacttcctacatccgtattc
caaggatttatggagaagatttacaagagattaaattga
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