Daphnia pulicaria: 124341313
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Entry
124341313 CDS
T08670
Name
(RefSeq) exosome complex component RRP46-like
KO
K12590
exosome complex component RRP46
Organism
dpz
Daphnia pulicaria
Pathway
dpz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124341313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpz03019
]
124341313
Messenger RNA biogenesis [BR:
dpz03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
124341313
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
124341313
NCBI-ProteinID:
XP_046650325
LinkDB
All DBs
Position
5:complement(4878936..4880071)
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AA seq
218 aa
AA seq
DB search
METEENSIRALKCEQSVLSRADGSVMFSQGNTVVMASVYGPLEAKIQKELSDRMYIELNY
KPKTGMPGVAERGKEKLIKTTCNHIILTNLHPRTAVCITVQEMQDGGTLLAASINAVCLA
LLDSGLPLQCLVAAVTCLVDKKDRIVLDPCISTVKEGYKAMFTFAFDSQKYNLILSHCEG
QVPYQRFQKAMELCQKASHVIFDFYRQAVLRKFSNELL
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggagactgaagagaatagcattcgtgcattaaagtgcgaacaaagcgtactgtcacgt
gcagatggctcggtgatgttttctcaaggaaatactgtggtaatggcttcagtgtatgga
cctttggaggctaaaattcaaaaggaactgtccgatagaatgtacattgaactaaactac
aagccaaaaacaggaatgccaggtgttgctgagcgaggaaaggagaaactcatcaagacc
acttgtaatcacattattctgacaaacctgcaccctcgaacagctgtctgcataacagtt
caagaaatgcaagatggtggaactttgctagcagcctccatcaatgctgtgtgccttgca
cttcttgactcgggtttacccctgcagtgtcttgtagctgcagtgacttgtttggtagac
aagaaggatagaattgtcctagatccatgcatcagcacagtcaaagaaggttataaagca
atgtttacctttgcttttgacagtcaaaaatacaacttaattctgagccattgtgaaggc
caagttccctatcaacgttttcaaaaagccatggagctgtgtcagaaagccagtcacgtc
atctttgatttctaccggcaagcagtactacgaaagttttccaacgaacttctgtaa
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