Daphnia pulicaria: 124341636
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Entry
124341636 CDS
T08670
Name
(RefSeq) SID1 transmembrane family member 1-like isoform X1
KO
K26111
SID1 transmembrane family member 1
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpz04131
]
124341636
Membrane trafficking [BR:
dpz04131
]
Endosome - Lysosome transport
Others
Others
124341636
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SID-1_RNA_chan
Ceramidase
Barttin
Motif
Other DBs
NCBI-GeneID:
124341636
NCBI-ProteinID:
XP_046650537
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Position
5:complement(858135..862246)
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AA seq
828 aa
AA seq
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MDTATKIKLLTVTALVTALLGTYFTALHIDSLARERYIFKLGNSHSVVRKDLSYDNSVSR
YQQKVHTRVIDAKLFQNYSFNVNSTLEYIFQYSYKQDIAANQALSVQVTSKTAFRENPVL
VVVRQQKAVLSWQLPLLLETASGWQEYSSVSRQLCTEPLNRNVSVEHEFFLGVSTSDPKN
LSFVASVTPVEDFVVELDGNHTVTLTASEPKYYQFVFPEGVTNVLLTVTSDDNYCMSVSI
QNLTCPVFDMDHDLKYDGIWQTLMNKTGMTISRERFPYGFFFVFVVKADDFECTGKRISP
PPLRKKTVHFNIHEKVSYIDFMAAVIGVLGIFALFYIGAFVSFCFNCRNTVPDELEPSLL
EVRNRPTRYGSMSTPIVGPTPTAVSRDVESEPLSRSSSDLDLTDIDLMPDAYSDKNVVRT
KTFLFVADLSHKGSRFHGKKSQLYMWNLLIVTVFYALPVLQLVIIYQKVLNDTGDQDLCY
FNFLCAHPLGDLTDFNHVYSNLGYVLLGLLFIINTARRDVRRRQAQANHDRLEKYYGIPQ
HYGLFYAMGTALMVEGVLSACYHICPTHANYQFDTTFMYVISMLCMLKIYQSRHPDINAE
AHAAFSVLAFVVLIGVISVFEDTLTFRIIFSAIHLLACLALSAQVYYMGRWKLNFGVFKR
IYMVFWNDFQAGPSNWFRPMYVDRMFLLVIGILTNVGLSVYGLMERPPDFASYMLAIFIT
NLMLYTTFYIIMKLRHGEKILCQAVFYIALASLSWGAAMYFFINKAITWRKRAAESRVFN
QECVILSFYDYHDIWHFLSAASLFFSFMTLLTLDDDLAYTPRDRIPVF
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atggataccgccacaaaaattaaattgcttacggtaactgctctcgttactgctttgttg
ggaacgtattttactgcactgcacatcgacagtcttgccagggagagatatattttcaaa
ctaggaaatagtcattcagttgtcaggaaagacttgagttatgacaactcggtgtcccga
tatcagcaaaaggtgcataccagagtcatcgatgcaaaactgtttcaaaactacagtttt
aatgtgaactcaacattggaatatattttccagtattcatacaaacaagatattgctgcg
aatcaagctttatctgtacaggttactagcaaaactgctttcagagaaaatcctgttctt
gtagttgttagacaacaaaaagcagttttgtcatggcaacttccgcttttgctagaaaca
gcaagtggatggcaagaatacagcagtgtgagccgccagctttgcactgagcccttaaac
cgcaacgtgtctgtagagcacgaattttttcttggtgtgtcaacatctgatcctaagaac
ttgagcttcgtagcttctgttactcctgttgaagattttgttgtcgaattagacggaaat
catacagtcacactgacggcttctgagccgaagtattatcaatttgtgtttccggaaggc
gttacaaatgtactacttacagttacatcggacgataattattgcatgtcagtctctatt
caaaacttaacgtgccctgtgtttgatatggaccatgatttaaagtatgatgggatttgg
cagacccttatgaacaagactggaatgacgataagccgagaacgatttccctatggattt
ttctttgttttcgtcgtcaaagctgacgactttgaatgcacaggaaagcgaattagtcca
ccacctctgagaaagaaaactgttcattttaatatccatgaaaaggttagttacattgac
ttcatggcagctgttattggagttcttggaatatttgcgctcttctacattggggctttt
gtctccttttgtttcaattgtagaaacaccgttcccgatgaactggagccgagtttactt
gaagtacggaacagacctacacgttatggttccatgtccactcctattgtcggtccaact
ccaactgctgtctcaagagatgtagaatcggaacctctttcacgctcatcttccgatctg
gacttgaccgatattgatctaatgcctgatgcatatagtgataaaaatgttgttcggacc
aaaacttttctttttgtggctgatctttcccacaaagggtcgcgattccatggcaaaaag
tcgcaactttacatgtggaatttattgattgtcactgtattttatgctctgccggtttta
cagcttgtcatcatttatcaaaaagtgctgaatgacaccggtgaccaggatctttgctat
ttcaactttctctgcgcacatccgctgggggatttaacggatttcaaccacgtctactca
aatctcggttacgttttactgggtcttcttttcatcatcaataccgcgcgcagagacgtt
cgtaggcgacaagctcaagcaaaccacgatcgattggaaaagtattacggaattcctcaa
cattacggcctcttttacgctatgggaacagcattaatggtcgaaggagtactcagtgcc
tgttaccacatatgccctacacacgccaactatcagttcgatacaacttttatgtatgtt
ataagcatgctttgtatgttgaagatctaccaaagtcgccaccccgacatcaacgctgaa
gctcacgcagccttttccgttctggctttcgtcgttctaattggagtcatctcagtgttt
gaggacactctgacttttcgaataattttttcagctattcatctcctcgcatgtctggct
ttatctgctcaagtctactacatgggcagatggaaattgaattttggagtgttcaaacga
atttatatggttttttggaacgatttccaagcgggaccgtcaaattggttcagaccaatg
tacgtcgatagaatgttcctattggtcataggaattcttacgaatgtgggattgtcggtg
tatggattgatggaacgtcctccagatttcgcttcctacatgctggcaattttcatcact
aatctgatgttgtacaccactttctacatcatcatgaaattgcggcacggcgagaaaatc
ttgtgtcaagcggtattttacattgccttggcctccctttcttggggtgctgcaatgtac
tttttcatcaacaaagccatcacttggagaaaaagagctgccgaatcacgagttttcaat
caagagtgcgtgatactcagtttctatgattatcatgacatttggcatttcctttcggct
gccagtctgttcttttccttcatgactcttcttactttggatgatgacctcgcttacacg
ccgcgtgataggattccagtcttctaa
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