Daphnia pulicaria: 124341676
Help
Entry
124341676 CDS
T08670
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1-like
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
dpz
Daphnia pulicaria
Pathway
dpz04120
Ubiquitin mediated proteolysis
dpz04137
Mitophagy - animal
dpz04144
Endocytosis
dpz04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124341676
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
124341676
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
124341676
04137 Mitophagy - animal
124341676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpz04131
]
124341676
04121 Ubiquitin system [BR:
dpz04121
]
124341676
03029 Mitochondrial biogenesis [BR:
dpz03029
]
124341676
Enzymes [BR:
dpz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124341676
Membrane trafficking [BR:
dpz04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
124341676
Autophagy
Mitophagy
Other mitophagy associated proteins
124341676
Ubiquitin system [BR:
dpz04121
]
Ubiquitin ligases (E3)
HECT type E3
124341676
Mitochondrial biogenesis [BR:
dpz03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
124341676
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WW
C2
WW_TCERG1
GMT-wHTH
Motif
Other DBs
NCBI-GeneID:
124341676
NCBI-ProteinID:
XP_046650564
LinkDB
All DBs
Position
6:complement(484214..489555)
Genome browser
AA seq
847 aa
AA seq
DB search
MSHTGINRRNGAIKIRLTILCAKNLAKKDLFRLPDPFAKVSVEGSGQCHSTDTCKSSLDP
KWNQHFDLYIGKSDAITISVWNHKKIHKKEGGGFLGCVRIMSNAIQRLKDTGYQRLDLTR
ANANDTDQVKGQIVISLLSREQHNSSSCHENSATPVVQTVVDALGNVASPASPAGIQEAA
TASVTSPLPQGWEERRTSSGRRYYVNPESRSSQWTRPIVESSSGAQASSSGGSSVSASNG
RESRRSHSSRERDKRHPAVPVQQSHSLDAVSSSNSSGSSFRRRSVRHRQPQQQQQQQPST
QQQQQQQQSRRPLANDLPDGYEMRKTGQGQVYFYHVTTGISTWYDPRIPRDLRDLPMPGA
LPPGWEMRHTPSGRIYFVDHNNRTTQFTDPRLSTGLALQNLLNLHRSDHRAAPSQPQPTL
PPPNAVATSENGACAAPVANSTSAPPPMATPLPDEKQEEALPRYKRDLVAKIKILRTELQ
TMQPQSGHCRLEVSRTEIFEESYRSIMKLRPKDLRKRLMVKFRGEEGLDYGGVAREWLHL
LSQQMLNPYYGLFCYSREDNYTLHVNPDSSVNPEHLSYFHFVGRIMGLAVFHGHHLDGGF
TLPFYKMLLNKAIVLDDITHVDPELHRSLTWMLESDITGVIDTTFSVEHNAYGAIQVHDL
KPDGRDLIVSEENKREYVRLYVSYRFMRGIEQQFLSLQKGFHELIPANLLRPFDERELEL
LIGGICKIDTADWQANTRLKHCTAETPVVQWFWQIVESYSEELRARLLQFVTGSSRVPLQ
GFKALQGSTGASGPRLFTIHLIDAPCENLPKAHTCFNRLDLPPYPSYEKMHEKLTQAVEE
TCGFAVE
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacacagggatcaataggagaaatggggccattaagattcgactcacaatactg
tgcgccaagaatctcgcaaagaaggatctgttccgtttgcctgacccatttgccaaagtc
agtgttgagggatcgggccaatgtcacagcacagacacctgcaagtcttcgttggaccca
aagtggaaccagcactttgacctgtacattggcaagtcagatgcgataaccatcagtgtt
tggaaccacaagaagattcacaagaaggaaggtggcggattccttggttgtgttcgaatc
atgtccaatgccattcaacgcctgaaagacacaggatatcaacgtcttgacttgacgcgc
gcgaacgccaacgacaccgatcaagtgaagggacaaatagttatttccttgctgtctaga
gaacagcacaattcgtcaagctgtcacgagaacagtgcaactcccgtcgtccaaaccgtt
gtggacgctctgggaaatgttgccagccctgcgtcacctgcaggcattcaagaagctgcc
acggcttcagtcacctctccccttccgcagggttgggaggaaaggaggacatccagtggc
cgtaggtattacgtgaatccggaatcgagaagtagtcaatggaccaggcccatcgtggag
agtagcagcggggctcaggccagcagcagcggcggcagctcagtttcggccagcaatggt
cgagaaagcagacgcagtcacagtagcagagaacgtgataagcgacatccagcggttccg
gttcaacaaagtcacagtctggatgcggtgtcgtcgtccaactcttccggatcgtctttc
agaagacgatctgtccgccatcggcaaccgcaacaacaacagcaacaacagccatcaacc
cagcagcagcaacagcaacaacagtcgagacggcccttggccaacgatttgccggatggc
tacgaaatgcgtaaaaccggccagggtcaggtttacttttatcacgtgacgaccggcatc
agtacgtggtacgatccgcgaatcccacgagacctccgcgatcttcccatgcccggcgct
ctgccccccggctgggaaatgcgtcacactccttcgggcaggatttatttcgtggaccac
aataaccggacgacgcaattcaccgaccctcgtctctctacgggactggccttgcaaaat
ctcctcaatctccaccggtcagaccatcgtgcagccccgtcgcaacctcaaccgaccctg
ccaccacccaacgccgtcgccacgtcggagaatggggcctgcgcggcgcctgtggccaat
tcgacgtccgccccacccccgatggccactcccctgccggacgagaaacaggaagaggct
ctaccgcgttacaagcgcgacctggtcgccaaaattaaaatcctgcggacggaattgcag
acgatgcaaccgcaatccggacactgccggctggaagtctctcggactgaaattttcgag
gagtcgtatcggagcatcatgaagttgcgcccgaaggatctccgcaaaagattgatggtg
aaattccgcggcgaggaagggctggattacggcggcgttgcccgcgagtggcttcacctc
ctctcgcagcagatgctcaacccgtactacggtcttttctgttactcacgcgaagataac
tacacgttgcacgtcaaccccgacagcagcgtcaatccggagcacttgtcctacttccac
tttgtcgggcggattatgggcttggccgtcttccacggccaccatttggacggtggcttc
accttacctttttacaaaatgctcctcaacaaagccatcgttctcgatgacatcactcac
gtcgatcccgagctccaccgctccttgacttggatgcttgaaagtgacataaccggagtg
atcgacacgactttctcggtcgagcacaatgcttacggcgccattcaagtccacgacctt
aagcccgacggccgtgatttgatcgtctccgaggagaacaaacgggaatacgtgcggttg
tacgtgtcctaccgatttatgaggggaatcgaacagcagtttctctcgctccagaagggc
tttcacgagctgattccggccaacctgctccgaccgttcgacgagcgggaactagagctt
ctcattggtggcatttgcaagatagacacggccgattggcaggccaatactcgactcaag
cactgcacagccgaaacgcccgtcgtccagtggttctggcagattgtcgagtcctacagc
gaggaactgagggccagattgttgcagtttgtgacgggatcatcgcgagtgcctctgcaa
ggattcaaagcccttcaaggttcgactggggcgtccggcccgcgcctcttcaccatccac
ctgatcgacgctccttgtgaaaatctacccaaggcgcacacatgcttcaaccggctcgac
ctaccgccctacccgtcctacgagaagatgcatgagaagctgacgcaagccgtcgaagag
acgtgcggctttgccgtcgagtga
DBGET
integrated database retrieval system
