Daphnia pulicaria: 124341767
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Entry
124341767 CDS
T08670
Name
(RefSeq) ATP-dependent helicase brm-like
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
dpz
Daphnia pulicaria
Pathway
dpz03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124341767
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpz03021
]
124341767
03036 Chromosome and associated proteins [BR:
dpz03036
]
124341767
Transcription machinery [BR:
dpz03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124341767
Chromosome and associated proteins [BR:
dpz03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
124341767
Chromatin remodeling factors
BAF complex
124341767
PBAF complex
124341767
GBAF(ncBAF) complex
124341767
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
NirdL-like_HTH
Motif
Other DBs
NCBI-GeneID:
124341767
NCBI-ProteinID:
XP_046650659
LinkDB
All DBs
Position
6:16823319..16830276
Genome browser
AA seq
1739 aa
AA seq
DB search
MSSGEPPSSMMTSPGPGPGTPQPSPLSHPAASPAPHSHPNSNAGNQQQQVASPMAPPQPP
SPMNHPQPSPSPMGPPMQQHPPQFQQQPQQQTYPPPMSGAVSMGPPHQPMQQPIRQHHGG
VPQPHYMGASGGYPPGSHHQPPQQPNYPSQPGGPMPQQSQQQPGAPPYPPDSINALQRAI
STMEDRGLQNDPRYATLLAMRGKQEGMAPTSHSPGPPLMDPNRQPGVPSQYGPPNPATLN
GNSSGPEGANSMKSSFLSPTQVHQLRAQIMAYRLLARNQPVPTNIGMAAQGKRTDLPTLQ
SQPNTVSQLDQQQQQIYVPSPSQPGQSFQRPTAPSAPTPMQPSSVRPIGPPYSSQQPVAP
SPSGQQSQLPSMGPAPSAGTPTPGTTASPVPGTIPTPRPPQPQVPVHPMQPSQGATAPTA
IQMGNAALQPIIAPPAVPTSNASLMQQQPVMPHSQQIQPQQLQQQTLVSKQNKVTPIAKP
AGLDPVVILQERENRMATRVAYRIEELSNLPTTMGEDLRIKAQIELRALRLLNFQRQLRS
EVLACTRRDTTLETAVNVKAYKRTKKQGLREARATEKLEKQQKMEAERRRRQKHQEYLTA
VLQHGKDLKEFHRNNLAKIVRINKAVLLHHANAEREQKKEQERIEKERMRRLMAEDEEGY
RKLIDQKKDKRLAFLLQQTDEYIANLTEMVKLHKTEQRRKMKEQQMIKRRVQRNDDGTVV
EDFHVSVIETASGNTLTGEEAPLASVLQTWLEAHPGWEELIEDEEQHIEEERPEETKKAV
TDESKTADEATVVVVKTALDDEYKTDDGEKNYYSIAHTVHEKVHGQASILINGKLKEYQV
KGLEWLVSLYNNNLNGILADEMGLGKTIQTIGLITYLMEVKKNPGPYLIIVPLSTLSNWS
LEFEKWAPSVNVVCYKGSPTVRRIVQNQMRAVKFNVLLTTYEYIIKDKSILAKLPFKYMI
IDEGHRMKNHHCKLTQVLNTHYLAPHRLLLTGTPLQNKLPELWALLNFLLPSIFKSVSTF
EQWFNAPFATTGEKVELNEEETILIIRRLHKVLRPFLLRRLKKEVESQLPDKVEYIVKCD
MSGLQKVLYRHMQSKGVMLTDGSEKDKKGKGGAKALMNTIMQLRKLCNHPFMFQHIEEAY
CEHMNVPGGLVSGPDLYRTSGKFELLDRILPKLKHLNHRVLLFCQMTQLMTIMEDYLNWK
SFKYLRLDGTTKADDRGDLLKRFNDKSSDYFLFLLSTRAGGLGLNLQAADTVIIFDSDWN
PHQDLQAQDRAHRIGQTNEVRVLRLMCVGSVEERILAAARYKLNMDQKVIQAGKFDQKST
GADRRQFLQTILHADEMEDEEENEVPDDETVNQMLARSEGEFELYQRMDIERRREEARQG
SARKPRLMEETELPEWMSKDEEEVERLTCEEEEERVFGRGNRLKKDVDYGESLTEKEWLK
AIGAMEEEGNVQDDDEEEEPGPSGRGSKRSRSTGGSSRRKRQRGDGDGGDEDDEPTNKKR
RGGGRSLNFDKESGVNPQLKRKMKKILEIVMKYTDAEGRILSQPFMKLPTRKELPDYYEV
IKKPIDINKILQRLQADKYMDFDDLERDFMLLCKNAQNYNEESSLIYEDSVVLQSVFTSA
RQRTEEEPEEVQQPPPPQQTDGEPNDEEDAQPSESDDNSNAASSVKVKIKLGKGRSGKSS
DGGAHASASGGRGKRKRTSRKYVSDEEDDFGEEEEGASERTSSRSSSRVASPAPSRRNR
NT seq
5220 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctggagaaccaccttcttcgatgatgacttcacctgggccagggcctggaaca
cctcagccatcacctttgtctcatcctgctgcatctccagcaccacattcacacccaaat
tcaaatgctggaaatcaacaacagcaagttgcttctcctatggcacctccgcaaccacct
tctccaatgaaccatcctcaaccatctccatcacccatgggtccaccaatgcagcaacac
cctccccagtttcaacaacaacctcagcagcaaacttatccaccacccatgtcaggagca
gtttcgatggggcctcctcatcaacctatgcagcaaccaataaggcagcatcatggtgga
gttccacagcctcattatatgggagcaagtggtggctatcctccaggttcacaccaccaa
cctccacagcaaccaaattatccatcacagcctggtggaccaatgcctcaacaatcccaa
cagcaaccaggagcaccaccttatccacctgacagtatcaatgctttgcaaagagctata
tctacaatggaagaccgtggcttgcagaatgatcctcgctatgctactcttcttgccatg
agaggaaaacaagagggaatggctcctactagccacagtcctggtccaccacttatggat
cctaacagacaacctggtgtgccatcgcagtatgggccgcccaatccagcgacccttaat
ggcaattcttctggaccggaaggggccaattctatgaaatcgtcattcctatcacctaca
caagtccaccagctacgagcgcaaattatggcttaccggttgttggctcgaaaccaacct
gtgccaacaaatattggaatggctgctcaagggaaacggacggaccttccgacacttcag
tcgcagcctaatactgtatcacagctggatcaacaacaacagcaaatatatgttccgtct
ccgtctcagcctggacagtctttccagagacctacagctccttcggctcctactccgatg
caaccttctagcgtacggcctattgggcctccatactcttctcagcaacctgtggcacca
tcaccgagcggacagcagtctcagctaccttctatggggccagcaccatcggcaggaact
ccaactccgggaactactgcaagtccagttcctggtaccataccgactcctcgtccccct
cagccacaggtccctgtacatccgatgcaaccatcccaaggggctactgcccctactgca
attcaaatgggtaatgctgcattgcagcccatcatagcaccaccagctgtgcccacttct
aatgcctcactcatgcaacaacaacccgtgatgccacattcacagcagatacaaccacag
caactgcagcaacaaacacttgtgtctaaacaaaacaaagttaccccaattgccaaacca
gcaggattagatccagttgtaattttgcaggaaagagaaaatcgcatggctacgcgcgtt
gcctaccgtattgaagaacttagtaatctacctactacaatgggagaggatttgcgaatt
aaggcgcaaattgaattacgtgctctgcgattacttaatttccaacggcagttgcgttca
gaagtgttagcttgtacgagaagagacaccacgttagaaacagctgtcaacgttaaagct
tataagcggacaaagaaacaaggactacgagaagctcgggcaactgagaagcttgagaaa
caacagaaaatggaagctgagcgccgacgccgtcagaagcaccaagaatatcttactgcg
gtccttcaacacggcaaagatcttaaagagtttcatcgtaacaacctggcgaaaattgtg
cgcatcaacaaagctgtcctactacatcatgctaatgcagaacgtgaacagaagaaggaa
caggagcgtattgaaaaagagcgtatgcgtcgcttgatggcggaagatgaagaaggttac
cgtaagcttatcgatcagaaaaaagacaaacgtcttgcattccttcttcaacaaacggac
gaatacattgccaatttgacggagatggtgaagctgcataaaactgagcaacggcgaaaa
atgaaagagcagcagatgatcaaaagacgtgtgcagcggaatgatgatggaacagttgtg
gaggatttccatgtgagcgttattgaaacggcttctgggaacacgcttaccggcgaggaa
gcgccacttgcttcagttctccaaacctggttggaagctcatcctggctgggaagaatta
attgaggatgaagagcaacatattgaagaagaacgaccggaagagacaaagaaagctgta
accgacgaatccaaaactgccgacgaagcaactgttgtggtcgtaaaaacggcgctagat
gacgaatacaagaccgatgacggagaaaagaattactattcgattgcccataccgtacac
gaaaaagttcacggacaggctagcattttgatcaatggcaaattgaaagagtatcaggtg
aaaggtttggaatggcttgtttctctttacaacaacaacctgaacggaattctcgctgat
gaaatgggtcttggtaaaaccattcaaactattggtttaatcacatacttgatggaagtc
aagaaaaatccaggcccatatttgatcattgtgcccttgtcaacactttcgaattggtct
ttggagttcgaaaaatgggctccttcagtcaatgtagtatgctataagggttccccaacg
gtgcgccgtattgtccaaaaccaaatgagagccgtgaaattcaacgtgcttctgactact
tatgaatatatcataaaggataaatcaatcctggccaaattgcccttcaagtacatgatt
atcgatgaaggtcatcgcatgaagaaccatcattgtaaattaacccaggttttgaacaca
cactatttagcgccccatcgtttgctattgacgggtacgccacttcagaataagctccct
gaattgtgggctttactgaacttcttgctgccatccatcttcaagtcagtctctactttt
gagcaatggtttaacgctccttttgccaccactggcgagaaggtagaactcaacgaggaa
gagaccatcttgatcattcgtcgtcttcataaagtcttacgtcctttccttctccgccgt
ctgaagaaagaagtggagtcgcaactgcccgacaaggttgaatacatcgtgaagtgcgac
atgtctggcttgcagaaagtcctctaccgacacatgcagagcaagggtgtcatgctcact
gatggatctgaaaaagataagaagggcaagggtggcgccaaggctttgatgaacactatc
atgcagttgagaaagctttgcaatcatccgttcatgttccagcacatagaagaagcctat
tgtgagcatatgaatgtgcctggtggactcgtatctggtcctgatttgtatcgtacttcg
ggcaaatttgaactccttgatcggattctcccgaaactgaaacatttgaaccatcgtgtt
cttctcttttgtcaaatgacccagctgatgaccattatggaggattatctcaattggaag
agcttcaaatatcttcgtttggacggtaccacgaaagcagatgatcgtggtgacttgctg
aagcggttcaatgacaagtcttcggattatttccttttcttgctctcaactcgtgctggt
ggtttgggtctcaatctccaagcagctgatactgtcatcatcttcgattctgattggaat
cctcaccaagatttgcaagcccaagatcgtgcccatcgtatcgggcaaactaacgaagtg
cgtgttttacgactaatgtgtgtcggatctgtcgaagagcgtattctcgccgctgcaagg
tacaagttaaatatggaccagaaagttattcaggctggtaagttcgatcaaaagtcgact
ggagctgatcgtcgccaattcctgcaaactattttacatgcggatgaaatggaggacgag
gaagagaacgaagttcccgatgacgaaacagtcaaccaaatgttagctcgtagtgaaggc
gagtttgaactttatcaacgaatggatatcgagcgccgacgagaagaggctcgccaagga
tccgcccgcaaaccgcgtctgatggaagaaactgagttgcccgaatggatgtccaaagat
gaggaggaggtggaacgtttaacctgcgaagaagaagaagaacgtgtcttcggacgagga
aatcgtcttaagaaggatgtcgactatggtgaaagtctgacggagaaagagtggctcaaa
gctattggtgccatggaggaagaaggcaacgttcaagatgacgatgaagaagaagagccc
ggaccaagtggacgtggatctaagcgatcccgctcgacaggaggaagttcgcgacgaaaa
cgccaaagaggcgacggcgatggaggggacgaagacgatgagccgacaaacaaaaaacgt
cgaggtgggggccgttcgctgaactttgataaagaaagcggcgtcaatccacaactcaaa
cgcaagatgaagaaaatattggagatcgttatgaaatacaccgatgctgagggccgaatc
cttagccaaccctttatgaagcttccgactcggaaagagttgcccgattattacgaagtc
attaaaaaaccgattgacatcaacaaaatccttcagcgattgcaagccgacaaatacatg
gatttcgatgacttggagcgggatttcatgctgctctgtaaaaatgcacaaaactacaat
gaggagtcgtctctcatttacgaggactcggtcgtccttcagtcggtattcacgagtgca
aggcagcgcacggaggaagaacccgaggaggtccaacagccgcctccgccgcagcaaacg
gatggtgaacccaatgacgaggaagacgctcagcccagtgaatccgatgacaactcgaac
gcggcgtcctcagttaaagtcaaaatcaagctcggcaaaggccgcagcggcaagagcagt
gacggtggcgcgcacgcctccgcctctggtgggcggggcaagcgtaagcgtaccagccgt
aaatacgttagcgacgaagaagacgatttcggtgaagaagaggaaggtgctagtgaacga
acttcttctcgtagttcatcacgcgtagcctcgcctgcaccttctcgtcgtaaccgttaa
DBGET
integrated database retrieval system
