Daphnia pulicaria: 124341790
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Entry
124341790 CDS
T08670
Name
(RefSeq) pseudouridylate synthase 7 homolog
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dpz03016
]
124341790
Enzymes [BR:
dpz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
124341790
Transfer RNA biogenesis [BR:
dpz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
124341790
Prokaryotic type
124341790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
DUF6478
Motif
Other DBs
NCBI-GeneID:
124341790
NCBI-ProteinID:
XP_046650689
LinkDB
All DBs
Position
6:complement(522877..528287)
Genome browser
AA seq
760 aa
AA seq
DB search
MEDNDCESVSEAKGQTMKKKVNVLEAMAKYNLKKQQEQELRMKAPSKQKPTPPVSPKATP
EKHNYGGEREYVKTERKEIDVGISEYICKGQGFSAILKQRYSDFQVHEIDMAGNIIHLTD
QTIVKYVESNDTEMVEESDVLTADQWNSIEAMVKTGDPKTVEIDVTEKSKEERQNIHKIV
RTKYEEENITSNSGPVDGRTIMKIFKMEGKQERRRNEKRRMGCIYTQFVLYKENLSTMEA
VNTIARALKTKAGFLMTAGTKDKRAITSQLVTLKNTEPLKILNSVRNNPKIAVGNFSFTK
QPLQLGNLKGNRFIIALRNVIGNESQILANLESLKEVGFINYYGSQRFGTRHVPTHYIGK
QLILGRWQKAIDLILEPPELNGRFQRDFDLTQARIEYKSTRDAHKAFSKIKRSLQTIEAQ
LLLHLKKFGKDLVGALNSIPRNLRLTYIHAYQSFLWNTVVSKRLSKFGPKPIVGDLVYVP
GTCDPEVDAEMELMNEESSALEPANDQSSEKEADGEKSNAKAQRNQRKVMFIDENNINDY
TINDIILPLPGFDITYPSNEVAGWYTELLQADGLTEMDFKQSTKTYNLGGAYRLVMSKPS
DVKWKFVRYDDPTLSLIPSDWDRLEKTQPPAAVAVKDGTYLGLVLEFSLPASSYATMALR
EIIKMDMSAEFQTSLNDAGGTKHPAPATAAAAAETVSSEPEEKRIKLEPDADPAPPAVGI
ESSEDPATKKIKKEPNEDPPAVGIEDPAAKKIKKERITSD
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atggaagacaatgactgcgaaagtgttagtgaagcgaagggccagacgatgaaaaagaaa
gtaaatgtcctagaggccatggccaaatataacttgaagaaacaacaagaacaggaattg
cgaatgaaggccccgtcaaagcagaaaccaactcctcctgttagcccaaaagccacccct
gaaaaacacaattatggtggggaacgagaatatgtaaagactgaaaggaaggaaattgat
gttggcatctccgaatatatttgtaaaggacaaggcttttcagctatcctcaaacaacgt
tactctgattttcaggtacatgaaattgacatggctggcaacattattcatttaacagat
cagactattgttaagtatgttgaatctaatgacactgaaatggtggaagaatctgatgtt
ttgacagcagaccaatggaatagtattgaagcaatggttaaaacaggggatccaaaaact
gttgaaattgacgttacagaaaagagtaaggaggaaagacaaaatatccacaaaattgtg
aggacaaagtatgaagaagaaaatattaccagcaactcaggacctgttgatggcagaaca
attatgaaaattttcaagatggaaggaaaacaagaaagacgtcgtaacgaaaagcggcgc
atgggctgcatttatactcaattcgtgttgtataaagaaaatctgagcacaatggaagca
gtcaacacaatcgctcgagcgcttaagacgaaagccggattcttaatgactgctggaacg
aaagataaaagagcaattacgagtcagttagtgacgttaaaaaatacagaacctcttaag
attttgaacagtgtacggaataaccctaagattgctgttgggaatttttccttcaccaaa
caacctcttcaattaggaaatctgaagggtaatcgtttcataatagcacttagaaatgta
attggcaacgagagtcaaattttggcaaacctcgagtcgctgaaagaagtaggtttcatc
aactattacgggtcccaacgctttggaactcgacatgttccaacgcattacattggaaaa
cagctgattttagggcggtggcaaaaagccattgatttaattttggagccacccgagttg
aacggcagatttcaacgcgatttcgacctcacacaagcgcgtatcgagtacaaatccaca
agggacgctcataaagccttttcgaaaatcaaaaggagccttcaaacaatcgaagctcaa
cttttattacatttgaagaaatttggcaaagatctcgtcggcgccctgaactccattcct
cgcaacttgcgactcacttacattcacgcctatcagagtttcctctggaacactgtcgtt
tccaagcgtctttcaaagtttggtccgaaaccgattgttggcgatttggtctacgttcca
ggcacttgcgatcctgaagtcgacgcggaaatggaattgatgaacgaggaatccagtgct
ctggaacctgcaaatgatcaatccagcgagaaggaagcggatggcgaaaagtccaacgca
aaagcgcagcgcaatcagcgcaaagtcatgttcattgacgagaacaacataaacgactac
acgatcaacgacattattcttccacttcctggctttgacataacgtatccctccaacgaa
gttgccggatggtatacagagctccttcaagcggatggcttgactgagatggatttcaaa
caaagcacaaaaacctacaatctcggtggagcgtatcgactcgtgatgtcaaagccgtcc
gatgtgaaatggaaattcgtacgttacgatgatcctactctgagcctgatcccatctgac
tgggatcgactggaaaagacccagcctcccgccgccgtcgccgtgaaagatggcacttac
ctcggactggtgttggaattcagcctgcccgcttcgtcgtacgccaccatggcccttaga
gagatcatcaaaatggacatgagtgccgaatttcagacgtcactcaacgatgctggcggc
accaaacatccggcaccagccaccgccgcagcagcagccgaaaccgtttccagcgaaccc
gaagaaaagcgaattaaactggagccggacgcggatccagcgccaccagcagtcggcatt
gagtcatctgaggatccagcgaccaaaaaaataaaaaaggaaccgaacgaggacccacca
gcagtcggcattgaagatcccgcggccaagaaaatcaaaaaggagcgaatcacgtccgat
taa
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