Daphnia pulicaria: 124342001
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Entry
124342001 CDS
T08670
Name
(RefSeq) neurobeachin-like protein 1 isoform X1
KO
K23286
neurobeachin-like protein 1/2
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpz04131
]
124342001
Membrane trafficking [BR:
dpz04131
]
Endosome - Lysosome transport
Others
Others
124342001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beach
DUF4800
NBCH_WD40
DUF4704
PH_BEACH
WD40_WDHD1_1st
WD40_Prp19
WD40
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
Beta-prop_EML_2
Laminin_G_3
EIF3I
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Laminin_G_2
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF12
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
IBN_N
WD40_MABP1-WDR62_1st
DUF1088
Motif
Other DBs
NCBI-GeneID:
124342001
NCBI-ProteinID:
XP_046650911
LinkDB
All DBs
Position
6:complement(4899106..4915904)
Genome browser
AA seq
2757 aa
AA seq
DB search
MADLKFGDFVGEFIRLWETQLEISWDAGKEFACMSEEGPHLSLLPDEFLPSLDRHLFQLK
TQIENDVSGQNVDAFTKIVKALFIVSRNLDNIPFIASCQLIPSCISVSSNILTCMMSRQL
EKDEVASVVLVCLFLEALYDPYFSYRKSIVNETVDTSKIKYHPALLQAEVIPFIYDCFQH
LNATSIPVIALSLLHLFGGIIKGGEHNAAKAIAPATVQLLQKAFLNSNDNLQLASAVLHC
ETAVVHTLMNTRPDQCQIELGEVMEIYQNTVGLLANQEAELLIQISTNRTPILCLAVQSI
VQFVRHRRRESLQILLVRTRVVDFLIMLLFDAKLSPEDKRVLVVSIIRALTAVLQDNKQA
QELLLSSGGYQKLFEAIKSLGEPTRLMMDSLIAMANGRDHDGGEERESMVRNVEPIAHLV
DWLPEINDHELQFETASAINQICSSSLQSKAMCCQRGLLRHVISVLEFHAKLNIRSIKQM
LRLIQSLGSHSITAAELKLILRLMRDTNDEEFPYSSYVLHCLSSMAKKDAACQECHYYFD
IQYETEGISISDIAQWQNPGYALSVCSWLRLDAFENPSSPGSNYRRQFFNLSSNKGHSFE
AFFLSDGTLVVSVTWKKEYTTAMVHSVILNDHQWHSVCISFIPSRRLFGQSHLSVYVDGA
LRLTVNVRIPPVGETFSSFTIGAPAISDQGNSNKQESSSAFSLPRKKSDARSPGLSSHIP
NYFSLPIALSSLKTPASEQHNVDPEVRIIPQGSQDSIWGKPTCLHGQIGLFALLQDSLNP
QNVRTFHEAGANSMSIWNSEDANLDVLEFYSKVAICLSARAHYNSYCMDLSSTHQFAGST
KAPVCTAWDVKEVLSCIGGVQALFPILDTVVQSDLVNPPLTGPLLSPDSDKPEVDGWEVL
PSSSYADWKLEQNPVSGFLSLLRNVLHHHSTNTDQLVRGSNIAIIGSLMQKVQPSLIDVQ
VLMAVQLLVEFARDAQDPAFLQSLYQHILFDMRIWGRSQFHVRIGHVQYLSNLIHEDRHS
FRKKYGPQYLLDVIKQHYQNDDQSDLSIDDRKTMRLALLGILKMYINKEITAGDISAITG
FLWSVRDNEMITEILDVLLTYIENKSPKDQFYLLMLEPRCAEILYALLLEKIFSIELREK
VLKLLINILKTDRAYEKSKVRLYLHDVGFQGLLMLMQGQPSSLEMTHLLTDIILSRDHPN
SYTGAMALAFSLAEENLEIKLEFSKRLLGFMLSRPNAPSTFVKQTSWQECIARLLIRKPI
ASSANTGIKPMVPDLIDLDVEATTYRVISTPTATTPMSPSKMWPTTPSMRDSTGLNLGLG
ATLEQDIKDVAESVSNLVAGAVTGNLNNIAIATGNLQNAAEVLTDNLHNVAGNLQTNIHS
AVNSAYSLFRQKTLQVQGSLEELGENTIQRLKRRSQSAQGTADTTDATDTGASTNSSPRL
KHPYRFLVAPLEVAVDALNIDHSDDDCPRNNKRESSVSISSRTSGQVTSKNYNDFGPSES
LDVETYSLISEVSGQWSGLVLDPTLDPEEDLCSTVLSIYLVLLWRGIPGCSKDDWRERSQ
ILSCINLLGLNNELYRSHLEIKRRLIEMILQAAGNELKQLAVNAASRSNVLVNCQYAARW
VYDLVVLDPHEDEVKKMSLKLLELTLAVFDVMNIFQEEDFASRKSTEMYHVALGLLLRFA
SSSNSELCAIAAARLHALIQFKSNPEINEVAYLIFNINSSLLAVQGKEDSSDCYACLIPI
MKAALEKVGPELEFEPICSAFPAKLFDQFQQVSQEEAWKTWIDEKIRPRSDQFRALHLQA
LPEIMNRSWAESDELAMLAVHRRCREVNESKIKFQMQILDAFRSKQSEEHVRFNAFLSHQ
RGHALVIRKKWRQLKQFLIGPRGSWAQRVDSEKRWKLSLCENRSRMRLKLVPNPHFDPHI
QASRLRDNAGIQVDIQSPDSLNCLLPSKVANQALKRAFNAQEPEDSLTEEDFALAASLEK
EELSEGKEKVTTSEECELVTLMSIVKGRLEISRGWICFWDAGLGCESADRERADFKFALS
QLQEVHLRRYNLRRSALEFFLIDHTTYFVNFNTKTRNRIYSRILSLRPPNLLYYSSRSPA
DVLRSSGLTQRWVQREISNFDYLMQLNTIAGRTYNDLSQYPVFPWILADYHSETLDLTNP
TTFRDLSRPVGVVNPKNAKEVRAKYDHFEDPSGIIAKFHYGTHYSNAAGVLHYLVRMEPF
ASLHIELQSGRFDVADRQFHSLNSTWRLLMDNPNDVKELIPEFFCQPEFLINMNRLDLGI
LQATKQPVDHVELPPWAKSPHDFIDQHRKALESDHVSAHLHEWIDLIFGYKQRGPAAVEA
LNVFYYCSYEGAVDLDAISDPVERQAVEGMINHFGQTPCQLFKEPHPMRLSQSEALAKSK
YPPSIELFFDGLSCVHIADLTVETRDSIVYLGIPNSDIDSTRSRGYGSQTASIPDVLVSV
SRSGCIGLHAWASHDKMLPYGFSLERDPTLSNPRNRRRINESFHPSVKLNSRLISVSSDC
KVYVGGQLDNSVKVYALPRLRLLSSVTQHIDIVTCLALDESGSQLMTGSRDTTCIVWDLS
STVLKSVQVLYGHDKTVTCVGLSTSLDMAVSGSLDGTVNVHTIKEGQYIRTLHAAGRADF
DRIVITQLWLSDRGDVVFAAEEKDNFSIQSYSINGERIGLSYSPFAFTALASASDGYVVC
GDSNGNVTIRRIISLVPVFDIPMQSCIEDLVMAPRNTQLLVALRDGKVVVVAPNIPQ
NT seq
8274 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttaaagtttggagattttgttggagaatttattcggctttgggaaacccaa
ttggaaatcagctgggatgctggaaaagaatttgcatgcatgtctgaggaaggaccacac
ctgtccttgttaccagatgaatttctcccgtccttggaccgtcacctatttcagcttaag
acacagattgaaaatgatgtcagtgggcaaaatgtagatgctttcactaaaatcgtaaag
gctctcttcatagtgagcagaaacttggacaacattccatttattgcatcctgtcaactg
attccatcatgcatatctgtttcatcaaatattttaacatgcatgatgagcagacaacta
gaaaaggatgaagtggcttccgttgttttagtttgcttgttcctggaagccctttatgat
ccttattttagctaccggaagtctatagtcaatgaaacagttgacacatcaaaaattaag
tatcatcctgccctgctgcaagcagaagtaatcccttttatctatgattgctttcaacat
ttgaatgccacctccattccagtgattgctctgagtttattgcatctatttggaggcatc
ataaaaggaggagagcataatgcagccaaagctatagctcctgccacagtgcagctttta
caaaaagcctttcttaattccaatgacaaccttcaattagccagtgccgtcttacactgt
gaaactgctgtagtgcatacgttgatgaacacgcgacctgatcagtgtcaaattgagctt
ggtgaggtgatggaaatatatcaaaacactgtaggattattagccaatcaagaagccgag
ttattgattcaaatatcaacgaaccgaacaccgattctttgtctcgccgtgcaatcaata
gttcaatttgtgcgacaccggcgccgagaatcgcttcaaattcttttagtgcgaacgaga
gtggtcgactttttaatcatgcttctttttgatgccaaattgagtcccgaggacaaacga
gtattggtggtttctattatcagagccctaacggctgttttacaagataacaaacaagcc
caggagctgttgttgagtagtggtggttatcaaaaattgttcgaggcgataaaatctcta
ggagagcctacgcgactgatgatggatagcctgattgccatggcaaatggtcgtgatcac
gatggcggagaagaacgcgagtcgatggttcgcaacgtggagcctattgcacacttagta
gattggcttcctgaaatcaacgaccatgagctgcaatttgaaactgcctcggcaatcaat
cagatttgctcttcttctcttcaaagcaaagcgatgtgctgtcagcgtggtctgcttcgt
catgtgatttctgttctggagtttcacgctaaattaaacatccgaagtatcaagcaaatg
ttgcggttgatccaaagtctcggctcccattcaatcacggcagctgaactgaagctaata
ttacgactcatgagggacaccaacgacgaagagtttccgtattcttcgtacgtgctccac
tgcttgtcgtctatggccaaaaaagacgctgcgtgtcaggaatgccattactactttgac
atccaatatgaaacggaaggaatctcaatttctgatattgcgcaatggcaaaatcctggg
tatgcactttctgtatgctcgtggctgcgcttggatgctttcgaaaatccgagttcccct
ggcagtaattacaggcgacaatttttcaacttgtcttcgaacaagggccacagtttcgaa
gcttttttcctgtctgacggtactttggtagtaagcgtcacttggaaaaaggaatatacc
acagccatggttcacagtgtgattttaaacgatcatcagtggcacagcgtctgcatttca
tttattccatccagacgccttttcggtcaaagtcacctttcggtttatgtggatggcgct
ttgcggttgacggtgaacgtccgaatccctccagttggtgagacattttcttcttttacc
atcggtgctcccgccatctcagaccaaggcaattcaaataaacaggaaagcagcagtgct
tttagtcttccaaggaaaaagagtgacgcccgctcgccaggattgtcgtctcacattccc
aattatttctctctgcccatagcgctctcttcactaaaaacgcctgccagcgaacagcat
aatgtagatcctgaagtccgcataattccccaaggaagccaagattcgatctggggaaag
cctacttgtttgcacggtcaaattggactttttgccctattgcaagactctttaaaccca
cagaacgttcgaacttttcacgaagccggagcgaatagtatgtcaatatggaacagtgaa
gacgctaacctcgatgttttagaattctattcaaaagtagcgatttgtctctccgccaga
gctcattacaattcgtattgtatggatctctcatccactcaccaatttgccggaagcact
aaagcacccgtctgtaccgcatgggatgttaaggaggttttgagctgtatcggcggcgtt
caagctctttttcccattttagataccgtcgtacaaagtgacctcgtaaatccacctctt
actggtcctttgctgagtcccgattctgacaaacccgaagttgatggatgggaagttctg
ccttcctcgtcgtatgcagattggaaacttgaacagaatccagtttctgggttcctgtca
ttactaaggaatgttctgcatcatcactcaaccaatactgatcaattggtcagaggatct
aacatagcgattattggaagccttatgcaaaaggttcagccttcattgatcgatgtgcaa
gttctaatggctgtccaactcctagtcgaattcgcaagagatgctcaagaccccgcattc
ctacaaagtctctaccagcatatcctattcgatatgaggatatggggtagatcacagttc
cacgttcgtatcggccatgtgcagtacttgtcgaatttgattcacgaagaccgacattca
ttccggaaaaaatacggcccccagtacttgctggatgtaatcaaacagcattatcaaaat
gacgaccaatccgatttgagcatcgatgacagaaaaacaatgcgcctagctctactaggc
attttaaaaatgtacataaataaggagattaccgccggcgacatttctgccatcacggga
tttctctggtctgttcgtgacaatgaaatgatcacggagatattggatgttcttttaact
tacattgaaaataagagcccaaaagatcaattttatttgttaatgctggagccacgttgt
gctgaaatactttacgctctgttactggaaaaaatattttctatcgaactgcgggagaaa
gtattaaagttgctgattaacattcttaaaacggatcgagcctatgaaaagagtaaagtg
cgactttatttacacgacgtaggattccaagggctactcatgcttatgcaaggacagccg
tccagcttagaaatgacgcatttactgaccgacatcattctttcaagagatcatccaaat
agttacactggagcaatggcacttgccttttctcttgctgaagaaaatctggaaatcaaa
ttggaattcagtaaaaggcttttgggatttatgctttcgagaccaaatgctccttccact
tttgtcaaacaaactagctggcaagagtgtattgctcgcttgttgattcggaaaccgatc
gcttcttcagccaacacgggaataaagccaatggtaccggatttgatcgacctagatgtg
gaagcaaccacctatcgcgtaatatctactccaacagctaccacacccatgtctccatct
aaaatgtggccaactactccttcaatgagagattcaactgggctgaaccttggtttgggt
gctacactggaacaggacatcaaagatgttgccgaaagtgttagcaatttggtggcaggt
gccgtgactggtaatttaaataatattgccattgcaaccggcaatttacaaaatgctgcc
gaagtacttacggacaatttgcacaatgttgcaggcaacttgcaaaccaatatccatagt
gccgttaacagcgcttacagtttatttcgtcagaagacgcttcaagtacaagggagtttg
gaagaattaggtgagaataccattcagcgactgaaacgccgcagtcaatcggctcaagga
accgctgatactaccgatgctacagacacaggagcttcaacaaattcttctcctcgattg
aaacatccttatagatttttagttgcccctcttgaagtggctgttgatgcattaaacatc
gatcacagtgatgatgattgcccaagaaataataaaagggaatcctcggtgagcatatct
tcacgaacatccggacaagtaacctcgaagaattataatgactttggtcctagcgagagt
ttggacgttgaaacatacagtcttatctcggaagtttctggtcagtggtctggtttagtg
ctagaccctacgttggatccggaagaggatctctgctcgacagttcttagcatttatctt
gtgttactttggcgaggaattccgggttgttcgaaagatgattggcgcgaaagaagccag
attctaagttgcatcaatcttcttggtctcaacaacgaattatatcgttcccatttggag
ataaaacggcgtttaattgaaatgatcctgcaagccgctggcaacgaattgaaacaacta
gcggttaatgcggcttcccggagcaacgtcttggttaattgccaatacgccgctcgttgg
gtctatgacttggttgtactagatcctcatgaagatgaggttaagaagatgtcgctgaaa
cttctagaacttacccttgccgtttttgacgtcatgaatattttccaagaagaagatttt
gcatcaagaaaatcgactgaaatgtatcacgtcgctctagggttgcttcttcgattcgca
tcaagttccaactcggaattatgcgccattgccgctgcccgacttcatgctcttattcag
ttcaaaagcaatccggaaataaacgaagttgcttatctcatctttaatatcaattccagt
ctactggctgttcaaggaaaggaagatagctccgattgctacgcttgtctaataccaatc
atgaaagctgctctagaaaaagttggaccagaattggaattcgagccgatatgttcagca
tttcccgcaaagctttttgatcagtttcaacaagtcagccaagaagaagcgtggaaaact
tggattgacgaaaagattcgtccgaggagcgatcagtttcgcgctcttcatctccaagca
ctacccgagatcatgaacagaagctgggccgagagtgacgagttggcgatgttagctgta
catcgaagatgtcgagaagtcaacgaatccaaaatcaaatttcagatgcaaatcctggat
gccttccggagtaaacagtccgaagagcatgtccgattcaatgcctttttgagtcatcaa
cgtggtcacgcattggtcattcgcaagaaatggcgtcagttgaaacaattccttattgga
cctcgtggctcttgggctcagcgagtcgactcggagaaaaggtggaagttgtcgctttgc
gaaaatcgttctaggatgcgcctcaaacttgtaccaaatccacattttgatcctcacatc
caagctagtcgactgagagataatgcaggcattcaagtggacattcaaagcccagattca
ctcaattgccttttgcccagcaaggtggctaatcaagcgctgaaacgagcattcaatgct
caggagccggaagacagtttaacggaggaagattttgctttagctgcttccctagagaaa
gaagagctcagtgaagggaaagagaaagtgacgacaagtgaagaatgcgaactggttaca
ctgatgtcaatcgttaaaggccgcttagagatatcacgcggctggatctgtttctgggat
gctggcctcggttgcgaatcggctgatagagagcgagctgatttcaaattcgcactcagc
caattacaggaagtccatttgcgccgttacaatctccgacgtagcgcgcttgaatttttc
ctcatagaccacacgacctactttgttaattttaataccaaaacgcgtaatcgaatctac
agtcggattctgagtttgcgcccgcccaatctgctttactacagtagtagatcgccagct
gatgtgctccgttcatctggactaacccagcgctgggttcaaagagaaatctcaaacttt
gattatttgatgcagttgaatactatcgccggtcggacgtacaatgatctgtcgcaatac
ccagttttcccatggatcttggcagattaccactccgaaactctggacttaactaatcca
acaacctttagggacctatcacgacccgtcggtgtcgtcaatcccaaaaatgccaaagaa
gttcgtgccaaatacgatcattttgaagatccttcaggtattattgccaaatttcattac
ggcacacactattcgaatgcggcaggtgtgctccactatttagttcgaatggagccgttt
gcttcgctgcacatcgaactccaaagcggaagatttgatgtagccgatcgacagttccac
tctcttaattcaacttggcggttgctcatggataaccccaatgacgtcaaagaactgatt
ccggaattcttttgccagcctgaattcctgatcaatatgaaccgattagatctcggtatt
ctgcaggccactaagcagccggttgaccacgttgaactccccccttgggcgaaatcacct
cacgatttcatcgatcaacaccgcaaagcactggaatctgatcatgtatcagcacacctg
cacgaatggattgatctcatatttggttacaaacaaagaggacccgctgcggtagaagct
ctcaacgtgttctactattgcagctacgagggtgcagtggatcttgatgcgatatcggat
ccagtggaacggcaagcagtggaagggatgatcaatcactttggtcagacgccctgtcag
ctttttaaagagcctcatccgatgcgtctcagtcaaagcgaagctctagccaaatccaaa
tatccgccttctatagaactgttctttgacgggctgtcatgcgttcacattgccgatttg
actgtcgaaacgcgagattccatcgtctatttgggcattcctaattcggatatcgattct
actcgtagtcgtggctatggctctcaaacagcttccataccagacgtcttggtcagtgtc
agtcgatcgggttgcattggcctccatgcgtgggcttctcatgacaaaatgctgccctac
gggttctccttggaacgcgatccaacgctcagcaatcctagaaaccggagacgaatcaac
gaatcttttcatcccagtgtcaagctcaatagtcgattgattagcgtttcgtctgactgc
aaagtttacgtcggtggccaactggacaacagtgtgaaggtgtacgctcttccacgactg
aggctgctcagttcagtcacccaacacattgacatcgtaacatgtttagcactggacgag
agcggttctcaattgatgactggatcgcgtgacaccacttgcatcgtttgggatctgtcg
tccacggtgctcaaatccgtccaggtcctctacggacacgacaaaactgtcacgtgcgtt
ggcctctctacgtcgctagacatggctgtcagcggatcgctggacgggacggtgaacgtg
cataccatcaaagaagggcaatacatccggacactgcatgccgccggacgagccgatttt
gatcgcattgtcatcacccaactctggttgtctgatcgaggcgatgtcgtcttcgccgcc
gaagagaaagacaatttttccatccaatcctactccatcaacggtgaaagaattggcctc
tcgtacagtccgttcgcgtttaccgctttagcatcggcaagtgacggttacgtagtttgc
ggggactctaacggcaatgtgacgatcagacgcatcatcagcttagtccccgtctttgac
attccaatgcaaagctgtatcgaagatttggtaatggctcctcgcaatacccaactttta
gtagctcttcgagatggcaaagtagtagttgtcgcacccaatattccgcaatag
DBGET
integrated database retrieval system
