Daphnia pulicaria: 124342225
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Entry
124342225 CDS
T08670
Name
(RefSeq) NFX1-type zinc finger-containing protein 1-like
KO
K27391
NFX1-type zinc finger-containing protein 1
Organism
dpz
Daphnia pulicaria
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_19
AAA_30
Viral_helicase1
SLFN-g3_helicase
AAA
nSTAND3
PhoH
AAA_16
NPHP3_N
DEAD
AAA_5
AAA_22
AAA_25
TIP49
Mg_chelatase
ResIII
NACHT
Motif
Other DBs
NCBI-GeneID:
124342225
NCBI-ProteinID:
XP_046651144
LinkDB
All DBs
Position
6:complement(24074441..24081553)
Genome browser
AA seq
1984 aa
AA seq
DB search
MSELLIDPPDDVTKWNIVPSQRDILRSDEVFLRPNFVGRSYPDLETYVDVQFRLLAEDFV
QPLRHGVAKLLSGKYQPRDVHELRIYENVTFKRGGLVQDRRRVVPERESSWRIYTVNFKQ
LPRVNWITSRRLIHGSLVCLWDPTSNDLIVASVAHSHPQALARGQVMLAIESLDEPDHFL
KKTYIMLEAVIFFEPYRAVLQVLQKFTKDSFPMLPYFLGTQTDHTPPSYITQFFTYVLPN
SEGSSLGIENLTDFSAWPSAIKLGLDKRQHEALYTALTSRVALIQGPPGTGKTFLALRIL
QTLLANKSFWQGTNYGEQSAKSQISTCGIISRRQSWHVKNKIFWENYLGDWRDDRAPVVV
ICFTNHALDQFLEGVLRSTDKIIRIGSQSKSPILENFSLLKVKSKVREAQNNGPYSETNY
LYYFHKMKKLRVNMEMQIGFIQQNIRKTYSEIFQIADLKRRGVISAEICHVFEKAERHWV
RRKRKENVLEWWLGWNNHRQLLKVFRETRMENRNQMCEVFAVITADKSDSADDQHLEDNC
EESDLTAIDSVEDIFIDDEDFQEELRVAQEKTKLKTTPDEGSEKKDTKLHFDKTAVTLEE
GTLIDFANNQLHRMERIKLFNELKGQALAALCRTADVIGMTTTGAAKNRLLLESLKAKIV
IVEEAAEVLETHIVCSLTPDCQQLIMIGDHQQLRPSVNVYDLAKKYQLDVSLFERLILGG
LKAVRLGVQHRMRPEVVRLIVPAIYEELENHSTVYDHPHVPGMQHDVFFYHHNYPEQEDG
SSFYNRHEVDMSLRLAIYLIREQKISPQQITILATYTAQLHQFLNSRKSYALLADVRITV
VDNFQGEENDVIILSLVRNNSRNSVGFLRTANRVCVALSRARNGLYILGNIRMLANASPV
WADMEKVLKEHDQIGEEIPLRCDRHHEIVRKVKRSNDFPIGSFCRELCGAELQCGHLCKI
ICHPDELHTSSCPEIITKLLACGHSYSGPCSRNSENVSCPEFVIVTKEPCMHEFKIPCSK
LQKGEFPGCPFPEMKKLPCGHIQQLPCSTPLDASLCDTQVEFEMSCLHLKTIRCGLPADD
RQKLAAYCTELVRKKLLCGHPKWMKCNEDPTEFDCGVDAERLLDCGHLFQYACPGKSMDA
FILSCERTVDQQMPCGHTQKITCSKPLTRCLEEIVRVLECGHSVKSACWNTTPTCTAIAE
KTLACGHQQSVQCNIDSVVCIQLSKVLHPVCSHLQFVPCLMTKDETYLGNLKCKTEALKM
LNCGHEILFPCSQDIDENVVCTSSISFTLPCNHTVKIPCISSDSTKGEMQKKEKCKAKCR
APLDCGHGCLLRCHDQAIAHVCNQIVSKQLECGHYTEMQCSRQPFDEVVCRVPVSVQRAC
RHAWMTECVNRSSKDVPVCRELIKKKLPCNHLALVECSASTDEIFCNEKCEHVLDCQHSV
PTKCGVSLNKRKLLTCRVMVEKEVPKCGHKVTIECEKQVSKYDCQQEVELEQIRLSCGHS
LRAECRLRYADKTAIVEATMKAAKCLGRCRAKLSCGHQCTARCHECQANGLHSVCTQRCN
RALICGHMCEAKCTKVCPPCKKPCGYQCSHQKCSASCGDECFMCMETCGWKCQHAKCTHP
CYEFCNREPCDEPCHKTLPCGHRCDSVCGENCPQKCLSCSGNKIPNFNQRSRYIYLECDH
WIKLKEMDEWVNRKDESEEPIRQIRFPSCPQCRKAIRQCFRYGDQIKAFHLDLIGIKWVF
VKDDTIRVVEKIKQALNKWKPQIAETEDDDRIKSTFFRLECRSKCNTLSSDQRWDLIYRI
QLIYLMSCMRNDSKKKYAMKKNGKKEEFNLNESSVEHILCEISSAFLYMEKNSNSGYGYY
FDLFIALKRMDLYRQYYAVNSLSERLPKSSRVNQRQLEEVAQLLNANQQLTDAEENFLAN
WFEEKSAFYGINLTSSFNRANVQLVQRLDMSKETWYKCTRSFCEAVFSKTCDKKCPECLE
EIEA
NT seq
5955 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaattgttaattgatccaccagacgatgttacgaaatggaacattgtgcctagt
cagcgtgacattttgcggtctgatgaagtcttccttcggcccaattttgtaggccgatct
tatccggatctggaaacgtacgtggacgtacaatttcgtctcctggcagaagattttgtg
cagccgcttcgacatggagtagcaaaattactctcgggaaaatatcaacctcgagacgtt
catgagttgcgtatttatgaaaatgtcacctttaaacgaggcggacttgtccaggatcga
cgaagggtggttccggagcgggaatcatcatggcgtatctacactgttaattttaagcag
ctaccgagagtcaactggatcacaagtcggagactcattcacggatcgctcgtttgtctt
tgggatccaacatcaaacgatttaatcgtagccagcgttgcacacagtcacccacaggca
ttggctagaggccaagttatgttagcgattgaatccttagatgagccagaccacttcctc
aagaagacgtacatcatgttagaagcagtgatattctttgagccttatcgagctgtgctt
caagtactgcagaagtttaccaaggattctttcccaatgcttccctatttccttggcacc
cagacggatcacacacctccgtcttatataacacagttttttacttacgtcctgcccaac
agtgaaggctcgtctctaggcattgaaaacctgactgatttttctgcgtggccaagtgca
atcaaattaggcttagacaagaggcaacacgaagctctgtacacggctcttaccagccga
gtggctttgattcaagggccacctggaaccgggaagacttttttagccctccgaattcta
caaacgttgctggccaataaaagcttttggcaaggaacaaattatggagaacaaagtgca
aaatcgcaaatttccacgtgcggaattattagtaggcgtcaaagttggcacgttaaaaac
aaaattttctgggagaactacttgggagattggcgcgatgatcgagcccctgttgtcgtc
atctgctttacgaatcatgccctcgatcaatttttggaaggtgtccttcgttcgaccgat
aaaataataagaattggaagccaatccaaatcgcccatcttggagaatttctctttgctg
aaagtgaaatccaaagtcagggaggctcagaataacggaccgtattcagagacgaactat
ctttattattttcacaaaatgaaaaagcttcgagtcaatatggagatgcaaattggtttt
atccaacaaaatattcgcaaaacttattctgagatcttccaaatcgctgacctgaaacga
cgaggtgtcatcagcgctgaaatttgccatgtctttgagaaagccgaaagacattgggtc
aggcgcaaacgtaaagaaaatgttctggaatggtggttaggctggaataaccaccgtcaa
cttctcaaagtattccgagagacgcgaatggaaaatcgaaaccaaatgtgtgaagtgttc
gctgtcattacggcggataaaagcgattcagccgatgatcaacatctagaagacaattgt
gaagaatccgatttgaccgctattgattcagttgaggacatctttatagatgacgaagac
tttcaagaagagcttcgtgtagcgcaagaaaaaacgaaattaaaaactacgcctgatgaa
ggctctgagaaaaaagacacaaaattacattttgacaagacggcagtaactttagaagag
ggaacgctcatcgattttgcaaataatcaattgcaccgaatggaaagaattaaattgttt
aatgaactcaaaggccaagccctagcagccctttgtcgaactgccgacgtcattggcatg
acaaccactggagcagccaaaaaccgcttgctactggagtcacttaaagcgaaaattgtt
atagtggaagaagcagccgaagtgcttgaaacgcatattgtttgttcactgacacctgat
tgccagcaactgattatgattggggaccaccagcagctacgaccgtcagtaaacgtgtac
gacctagcgaaaaaatatcaactggatgtgtcgttatttgaacgactcatcttgggcggc
ctgaaagctgttagactgggcgtacagcaccgaatgcgacccgaagtagtgcgactcatc
gttcctgccatctacgaagaattggaaaatcactctaccgtctacgatcacccccatgtt
ccgggaatgcagcacgatgtcttcttttaccatcacaactatccggagcaggaagacgga
agtagcttttacaatcgtcatgaagtcgatatgtctctccgattggctatttatctcatc
cgtgaacagaaaatctctccccaacaaatcaccatcttggccacatacaccgcccagctt
catcagtttttgaattcgcgcaaatcttacgcattactagcggatgtccgtataacggtc
gtcgataatttccagggcgaagaaaacgatgtcattattctttcgctggtgcgaaataac
agccggaactctgtcggcttcctccgcactgctaatcgtgtttgtgtagcattgtctcgt
gcccgaaacggcctctacattctcgggaatattcgaatgctagctaatgcaagccctgtc
tgggctgacatggagaaagtgttgaaagaacacgaccaaatcggcgaggagattccactg
cgatgtgaccgccaccatgaaatcgtccgtaaagtcaaacggtccaatgatttccctatc
ggatcgttttgtcgcgagttgtgcggtgcagagcttcagtgcggccacctttgcaaaatc
atctgtcacccggatgaactacatacaagcagttgtcccgaaataatcaccaaactattg
gcctgcggacatagctattctgggccctgctcaagaaattccgaaaacgtgtcctgccca
gagtttgtgatcgtgaccaaggaaccgtgcatgcacgaatttaaaattccatgttccaag
ctacaaaaaggcgagttcccaggctgtcctttcccggagatgaagaaacttccttgcgga
cacatccagcagcttccgtgctctacgccactggatgcctctctctgtgatacgcaagtg
gagtttgagatgtcgtgtttgcacctgaaaacaattcgatgcggtttgccagcagacgat
cgacaaaagctagctgcttactgtacggagctggtgcgtaagaaacttttatgtggccat
ccgaaatggatgaaatgcaatgaagatccgacggaattcgactgtggcgttgacgctgaa
cgtcttctggattgcgggcatcttttccagtatgcatgccccgggaaatccatggatgct
tttattttatcttgtgagcgcactgtcgatcaacaaatgccatgtggccatacgcagaaa
attacgtgttctaaaccgcttacacggtgccttgaagaaatcgttcgagttctcgaatgt
gggcacagcgttaaaagcgcttgctggaacacgacaccaacctgtacggcgattgcagag
aagacattggcgtgcggccaccagcagtctgtccaatgcaatatcgactcggttgtttgc
atccaactgtccaaagtccttcatcccgtttgttcgcatttacaattcgttccctgtttg
atgaccaaagatgaaacttatttgggcaacttgaaatgcaaaacggaggcattgaaaatg
ctaaactgtgggcacgaaattctgtttccttgttcccaggacatcgatgaaaacgttgtc
tgtacttcctcgattagttttacgcttccgtgtaaccatacggtcaaaattccatgcatt
tcgagtgatagcacgaaaggagaaatgcagaaaaaggagaaatgcaaagcgaaatgcaga
gcccctcttgattgtggccatggttgtttgctgcgttgtcacgaccaggcaattgcgcat
gtttgcaatcaaatagtttcaaaacaactggaatgcggtcattatacggaaatgcagtgt
tcccgccaaccgttcgatgaggtagtctgtcgcgtacccgtctccgttcaacgtgcttgc
cgtcatgcgtggatgaccgaatgtgtgaataggtcttcgaaagacgtgcccgtctgtcgt
gaactaataaagaaaaaattgccctgcaatcatttggcattggttgaatgttccgcatcg
actgacgaaattttctgcaacgagaaatgcgaacatgtcctggattgtcaacacagtgta
cctactaaatgtggagtatcgctgaataagaggaaattgttgacctgcagggttatggtg
gagaaggaggtcccgaaatgcggtcataaagtcacgattgagtgtgaaaagcaagtgtcc
aaatacgactgccaacaagaagtcgagctggaacagataaggctttcttgtggtcattct
ttacgagcggaatgtcgacttcgttatgctgataaaactgccattgtggaagctacgatg
aaagcggcaaagtgtcttggtcgttgccgagcaaaactcagttgtggtcaccaatgtacc
gcacgctgtcacgaatgccaggcaaacggactccattcagtctgcactcagcgttgtaat
cgtgctcttatatgcgggcatatgtgtgaagccaaatgcactaaagtgtgtcctccgtgc
aagaaaccttgcggataccaatgctcacatcaaaagtgttcagcatcatgtggcgatgaa
tgtttcatgtgcatggaaacttgtggctggaaatgccagcacgcgaaatgcacccatccc
tgctacgaattttgcaatcgggaaccttgtgacgagccttgtcacaaaaccctaccttgt
ggtcatcgatgtgacagcgtctgcggtgaaaattgcccgcaaaaatgtttgtcttgttct
ggtaacaaaataccaaacttcaatcagagatccaggtacatttatctggaatgcgaccac
tggatcaaattgaaggaaatggacgagtgggtgaatcgaaaggatgagagtgaagagccc
atccgccaaatccgtttcccttcgtgtccgcagtgcagaaaggcgatccgacagtgtttc
cgctatggtgaccaaatcaaagccttccatttggatttgattggcataaaatgggtcttt
gtcaaggacgacacgatccgcgttgtcgaaaaaatcaagcaagcactgaacaaatggaaa
ccgcaaatagcggaaacagaagatgacgaccgcatcaagtcaactttttttcgtctagag
tgtcgttctaagtgcaacactttgagtagcgatcaacgttgggacctgatttatcggatt
cagttaatctacctaatgtcttgcatgcgcaacgattcaaagaagaaatacgcgatgaaa
aagaacgggaaaaaagaagaatttaatctaaacgagtcgtcagtggaacacattctgtgc
gagatttccagcgcattcctctacatggagaaaaattcgaattctggatatggatactat
ttcgacttgttcattgccttgaaacggatggatttgtatcgacaatactacgctgtcaat
tccctgtcggaaagactcccgaaatccagtcgcgtcaatcagaggcaactagaggaagtc
gcccaactactaaacgccaatcaacaattgaccgatgctgaagaaaacttccttgcgaat
tggttcgaagaaaaatcggctttttacgggattaatttaacgagttcatttaatcgtgct
aacgtccagctcgtacaacgtctcgacatgagcaaagaaacgtggtacaagtgcactcga
tcgttttgtgaggcggtcttctccaaaacatgcgacaaaaaatgtcccgaatgcttggaa
gaaattgaggcttga
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