Daphnia pulicaria: 124342236
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Entry
124342236 CDS
T08670
Name
(RefSeq) uncharacterized protein LOC124342236 isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
dpz
Daphnia pulicaria
Pathway
dpz03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124342236
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dpz03009
]
124342236
Ribosome biogenesis [BR:
dpz03009
]
Eukaryotic type
Pre-60S particles
RNases
124342236
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_27
DUF294_C
Motif
Other DBs
NCBI-GeneID:
124342236
NCBI-ProteinID:
XP_046651164
LinkDB
All DBs
Position
6:2504940..2507815
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AA seq
708 aa
AA seq
DB search
MSGEVMSRKRAARIERRKSRVAAIFKVDEKPEFQEITSAQKEEQGDEPPEKQLQLSQLSD
EEYKALRTKLRERNRLTQYTPVFRLVQLGLTASLNVPKASRIPVLVTDVQTLFLYTIIGD
SRYDHYKWCSLNKWNNLTQTLILIVEDVSVDELENNTDVFSGTLKIFEDVVEMSNPASDG
FSLDLALAYVPLSYAMKRRVMEGYPSLQAACKDGYIYGVTDSPVQENTDKLSAESHSSEI
PTINSEQIVSGLKEKTTEAKTERDGEKTSRNCLSNNTEEGNVVTGDVMSEEKRQCNESDL
IKTDVASRVQEQANLNEVTSSNGGTCLDIITQEDKSKCSRLELLLNASQLISELYPLPGN
EECCNFVFTQNEYDPVTDQSPMFSIDCEWCTCVDGSYGLARVAVVDENLKTLYHTYVKPD
LAIADYLTRYSGITEELLLDVKKTPSDVQQDLRNLLPSDAILVGQSLQSDLKALKMFHPY
IIDTSVIFNMTGTRSFKSKLKVLAASFCGRRIQDSSDGHDPTEDAIAAMELVQKKMKMGT
EFGDVILIRDSFPHSSAEGNNQDNLIHMKLFTFIQSHNKSATLITTHPSVEKSYRPGLLK
LNSAVVKRKKDEESLAEPVQMLVASDLNEAVTVTSRSRFNNNFTLVHTSLEKGELDCKAK
LKDLDKAIVEIYHGVSVNGMMIVIFGGKTNPVQNGACLVRVNNRSRPL
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtgaagtgatgtcaaggaaaagagctgcacggattgagcgacgtaaatcccga
gttgcagcaattttcaaagtcgacgaaaagccagagttccaggaaataacgagtgcacag
aaagaagaacaaggagatgagccaccagagaagcagttgcagttgagtcagttgagtgac
gaagaatacaaagcacttaggacgaaactcagggaaagaaacagattgacacagtatacc
cctgtatttagacttgttcaattaggcctcactgccagtttgaatgtccccaaggcttct
cgcattcctgttcttgtgactgatgtgcaaacccttttcttgtatactattattggggat
tcccgctatgaccactataagtggtgcagtcttaacaaatggaataacctgacacaaaca
ctgattttgattgttgaagatgtatcagtggatgagttagaaaataatactgatgttttc
tcagggactctgaaaatttttgaagatgtagtagaaatgagtaatccagcaagtgatggc
tttagtcttgatcttgccttagcctatgtaccactcagttatgcaatgaagagaagagta
atggaaggctatccttccttgcaagctgcctgtaaggatgggtacatatatggagttact
gactcaccagttcaagaaaatactgataaattatctgctgaaagccattcatcagagatt
ccaactataaattcagaacaaattgtttcaggattgaaagaaaaaacaacagaggcaaaa
accgaaagagatggagaaaaaacaagtaggaactgcttgtcgaataacaccgaagaggga
aatgtagtgacgggtgatgtgatgagtgaggaaaaaaggcagtgcaacgaatcagatctg
ataaaaactgatgtagcctcaagagtacaggagcaggctaatttgaatgaagtaacgtct
tcaaacggcggtacatgtttagatatcattacccaggaagacaaaagcaaatgtagtcga
cttgagttgttgttaaacgcctctcaacttatctccgaactgtatcctttgcctggcaac
gaagagtgttgcaattttgttttcactcagaatgaatacgatcctgtcactgatcagtcg
cccatgttttcgatagactgcgaatggtgcacttgtgttgatggatcatatggtttggct
cgcgtggctgttgttgatgaaaatttgaaaactttatatcacacttacgtcaaaccagat
ttggcgattgcggattaccttacgagatattcgggaattaccgaagagttactcctggat
gttaagaagaccccttctgatgttcagcaggatttacgaaatttgttaccttctgacgcc
attcttgttggccaatctctacagtctgatttaaaagccttaaaaatgtttcatccgtac
atcatcgacacttccgtgattttcaatatgaccggcacgcgttccttcaaaagcaaactc
aaagtgttggcggcttcattctgtggccgtcgcattcaggattcttcagatggtcatgac
ccgacagaagatgcaattgctgcaatggagctagtacaaaagaagatgaaaatgggaaca
gaatttggagatgttattctaattagggattcctttcctcattcgtcagcggagggaaat
aaccaggataatctcattcatatgaagctctttactttcattcaaagtcacaacaagagt
gcaacgttaatcaccacacacccttctgtagaaaagtcttatcgcccaggattacttaaa
ctcaattcggctgttgtcaagagaaaaaaagatgaagaatcattggcagagcctgttcaa
atgctcgttgctagtgatttaaatgaagccgtaacagtaacatcacgttcacgtttcaac
aacaacttcacccttgttcatacttctttggaaaaaggagagctggactgcaaagcgaaa
ttgaaagatctagacaaagccattgtagaaatataccatggagtttctgtgaatggaatg
atgattgtaatatttggggggaaaactaatcctgtgcagaacggagcttgtcttgtgcgt
gtaaataacagatctcgaccattgtga
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