Daphnia pulicaria: 124342389
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Entry
124342389 CDS
T08670
Name
(RefSeq) RNA polymerase II subunit A C-terminal domain phosphatase-like
KO
K15732
RNA polymerase II subunit A C-terminal domain phosphatase [EC:
3.1.3.16
]
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dpz01009
]
124342389
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpz03021
]
124342389
Enzymes [BR:
dpz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
124342389
Protein phosphatases and associated proteins [BR:
dpz01009
]
HAD phosphatases
Fcp/Scp phosphatases
124342389
Transcription machinery [BR:
dpz03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
124342389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NIF
BRCT
BSH_Fcp1
PTCB-BRCT
BSH_YknX
FCP1_C
BSH_RND
Biotin_lipoyl
RTT107_BRCT_5
BSH_LcnD
LIG3_BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
124342389
NCBI-ProteinID:
XP_046651321
LinkDB
All DBs
Position
6:complement(3673231..3676365)
Genome browser
AA seq
835 aa
AA seq
DB search
MAATQRESFFFPENFPVKIVKLKVKEGSNITLGQILFQFEPEESPLYEKESVDSQISNGP
SKHVVRANSAGLLEKLHVNEGDVIKQGSLILEYSSCSHPTVMKEMCAECGADLRETDQRS
QTAAVAMVHNIPELMVSMKEATKLGKKDEERLLKDRKLVLLVDLDQTLIHTTNDEIPANI
EDVFHFQLHGPNSPWYHTRLRPFTKELLCSMSSLYELHICTFGSRTYAHMIANFLDEKGR
YFSHRILSRDECFSAHSKTANLKALFPCGDKMVVIIDDREDVWNFAPNLIHVRPYHFFQH
TGDINAPPGLSKQEKDDKEGFDFKSLNKAENSSEGSSSEVLNGSTSKSEEKDKESPEKVL
SDEDVGAGTQVGGEVTETPCEYVEAKQDDGAMGTADDMKETKDITTENNLEKTKENSKES
EEPPLEKTVEENVPKQTELSSESEKSSAEKENGQIHIRDTDDYLLHLQDILRNIHGAYYE
LYDGNQENGDETKAVPDMKIVLPYVRRKTLKEVHVVFSGVVPTNTPLERSKPYLVAKSLG
ANIMTRVSEETTHIIAARLGTAKLIEAKKYKHIRVVTPDWLWTCAERWEIVDERLYPLNS
EFAIVRRKPPAHCTSPDVAIQLAIAASVKDEQDAAAAVPYYDRVTGKRVVRQPKRSDKGK
TLATPRSSNTQKKFCETVNPLLSLSVDEIADMDREVEDILQDSDQDSDGGETDKEQDPSL
AEDDYSEQRQDKSEATAGGKTDVGESPSRKRKLEVEDHNLVIGGVIDQNNPENDTLMVKF
RRGESIPVLDGDEPDEEDSNEPEIDELESDEEAEDSELCLAGEALEREFLISEED
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggcggcaacgcaacgcgaatcgttttttttcccggaaaattttcctgttaaaattgtt
aaattaaaagtcaaggaaggttccaatataactctaggtcaaattctctttcaatttgaa
cctgaagaaagccctctttacgagaaagaaagtgtcgattcccaaattagtaatggcccc
agtaaacatgttgttcgcgccaactcggctggattgttggaaaaactgcacgtcaacgaa
ggagatgttattaaacaagggtcactcattcttgagtatagtagctgcagtcatccaact
gttatgaaggaaatgtgtgcagaatgtggggcagatttgcgtgaaactgaccagagaagt
caaacagccgctgtagccatggttcataacattccagaactgatggttagcatgaaggaa
gccactaagttgggtaaaaaagatgaagaacgtcttcttaaagacagaaaactggtcctg
ctagtagatttagatcaaactctgattcacacaacaaatgatgagatccctgcaaatata
gaggatgtttttcactttcaactacatggacccaactcaccttggtatcacactcgttta
agacccttcaccaaagagcttctttgcagcatgagctctctttatgagcttcacatatgc
actttcggttcacgcacgtacgctcacatgatcgcaaattttctagatgaaaagggtcga
tacttttcccatcgaattttatctcgtgatgaatgcttcagtgcgcattccaaaacagct
aatctcaaagctctattcccatgtggagacaaaatggttgtcattatagacgacagagaa
gatgtatggaactttgcaccaaatttgattcatgttcgtccataccattttttccaacat
acgggagacataaacgctcctccaggactatcaaaacaagaaaaagatgataaggaagga
tttgactttaaatcattaaacaaggcggaaaattcatccgagggatcttcctccgaggtg
ttgaatggatctacgtctaagagtgaagaaaaagataaggaatcgcctgaaaaagttttg
agtgatgaagatgttggtgctggaactcaagttggaggtgaagttaccgaaaccccatgc
gaatacgtggaagcaaaacaagatgacggtgccatgggtacggcagatgatatgaaagaa
acgaaggacatcaccactgagaataatttggagaaaaccaaagaaaactcaaaagagagc
gaagaaccccctttggaaaaaactgtcgaagaaaatgtaccaaaacagacagaattaagt
agtgaaagtgaaaaatcgtcagcagaaaaagaaaatggacaaatccatatccgtgacacg
gacgattatcttctgcatttgcaagatattttgcgaaacatacatggtgcttactatgaa
ttatacgatggcaatcaggaaaacggagacgaaaccaaagcggtaccagatatgaaaatt
gtcctaccatatgtccgtcgcaaaactctcaaagaagttcacgtagtattcagcggcgtt
gtacccactaacaccccattagagagaagcaagccatatttagtagctaaaagtcttgga
gcgaatataatgacccgggtgtctgaagaaactactcacataattgctgccagattagga
accgccaaactgatcgaagccaaaaagtataaacacatccgtgttgtaactcctgattgg
ctctggacatgtgctgaaagatgggagattgtagacgagcgcctttatcctcttaactca
gaatttgcaattgttcggagaaagcctccagcacactgcaccagcccggatgttgccata
cagttagcaattgccgctagtgttaaagatgagcaggacgctgccgctgctgttccatat
tacgaccgcgtcacaggaaaacgggttgtccgtcaaccaaagagaagcgacaaaggaaaa
acgttagcaacgccccgcagttcaaatactcaaaaaaagttttgcgaaacagtcaaccca
ctgttgtctttgtctgtggacgaaattgctgacatggaccgcgaagttgaagatatcctt
caagactcagatcaagactcagatggcggggagacagataaagagcaagatccttctctg
gcagaagacgattatagtgaacagagacaagataagagtgaagccacagcaggaggtaaa
actgacgtcggtgagtcaccttcccgaaaacgaaagctcgaagtagaagatcacaactta
gtcatcggaggagtgattgatcaaaataatccagaaaacgatacacttatggtaaaattt
cgacgcggcgaatccattcctgttttagacggagatgagcctgatgaggaggatagcaac
gaaccagaaatcgatgagctagaatcagatgaagaagcggaagattctgaactatgtcta
gctggtgaggccctcgagcgcgagttcttaataagtgaagaagattga
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