KEGG   Daphnia pulicaria: 124342536
Entry
124342536         CDS       T08670                                 
Name
(RefSeq) transcription factor SOX-11-like
  KO
K23581  transcription factor SOX4 (SOX group C)
Organism
dpz  Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:dpz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:dpz03000]
    124342536
Transcription factors [BR:dpz03000]
 Eukaryotic type
  beta-Scaffold factors with minor groove contacts
   HMG SOX
    124342536
SSDB
Motif
Pfam: HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 124342536
NCBI-ProteinID: XP_046651450
LinkDB
Position
6:complement(11101978..11112044)
AA seq 571 aa
MRERKSRRSATTTTSDSSAMVPQQQTNGSRADSPSNHVPKFGSQLVDRKSSTPYSDATQT
KKNNPNHIKRPMNAFMVWSQIERRKICEIQPDMHNAEISKRLGKRWKTLSEEERQPYISE
AERLRQLHMQEYPDYKYRPRKKAKLSTSGSASPSSSLSPSSSSSSHAMPASPVSHSSNSN
SSIGSGGGGGGLSSLKALGDHRRTMTSSKGRTSSAVVTSGPCGTLLTTNHTNNNSHSTPN
QNGHHHGFASLAKMTSSSSSSSSSRARITQTLGGLSTVNHNRLKLRLTIDRKFKESIRNS
KNVPTALLAVSTKSSTTTTAVAQPPAKVPSSPSSASFPDSPASLTMYEESSAGHHHHNNH
HLHNVAVVRGDSPISGLITPPTSSSSSSPSSNSNGGSGGQSLLSLGSFGIKSEPGVLVAT
LTPEPDVESDDMDESPSHHHFGLQSMVGGVNGCNNGGGGGSGGVGGKSGDSTHSSMRIKQ
EPSLMMSSASGTGESSLADLDSLTDLFSLPSDMKLDIDTLAADDLDSIDSASLSSGSHFE
FSCTPDVNDMLMDIGVSNDWVDKSFANLIDC
NT seq 1716 nt   +upstreamnt  +downstreamnt
atgagagaaagaaagagccgaagaagcgccacgacgacgacgagcgacagcagcgccatg
gttcctcaacagcagacgaatggcagcagggccgatagtcccagcaaccacgtaccgaaa
tttggctcgcaacttgtggatagaaaatcttcaacgccatactcggatgccactcagacg
aagaagaacaacccgaaccacatcaagcgaccgatgaacgcgttcatggtgtggtctcag
attgagaggcgcaagatctgcgagatccagccggacatgcacaacgccgagatctccaag
cggctgggcaagcgctggaagactttgtcggaggaggagcgtcagccgtacatttccgaa
gccgagcggctccgtcagttgcacatgcaggaataccccgactacaagtacagaccgcgc
aagaaggccaagttgagtacgagcggcagcgccagtccgtcctcgtccttgtcgccgtct
tcatcttcctcgtcgcacgccatgccggccagccccgtcagccactcgagcaacagcaat
agcagtatcggcagcggtggtggcggcggtggcctcagcagcctcaaggcacttggcgac
catcgaaggacaatgacgtcgtccaaaggccggaccagcagcgccgtggtgacttcggga
ccttgtggcactctgctgacgacgaaccacacgaataacaacagccacagcactcccaac
cagaatggccatcaccacgggttcgcctcgctggccaagatgacgtcgtcctcgtcgtcg
tcgtcgtcgtcacgggcgcgcatcacgcaaaccttgggcggcctcagcaccgtcaatcac
aaccgcctcaagttgcgtctgacgatcgaccgcaagttcaaggagagcatccgcaacagc
aaaaacgtcccaacggctctgctggccgtcagcactaagtcgtcgacgacgacgacggca
gttgcacaaccgccggccaaagttccgtcgagcccctcgtcggcctcgttccccgactcg
cctgccagtctgaccatgtacgaggagtcgtctgctggacaccaccaccacaacaaccac
cacctccacaacgttgccgtagtcagaggagactcgcccatctctggattgatcactcca
cctacctcttcttcatcatcgtcgcccagcagcaacagcaacggcggctccggcggtcaa
tcgcttctcagcctgggctcgtttggcatcaagagcgagcccggtgtcttggtggccact
ttgactcccgagccggacgtcgagtcggacgacatggacgaatcgcccagtcaccaccat
ttcggtcttcaatcgatggtcggaggcgtcaacggttgcaacaacggcggcggcggcggc
agcggcggagtgggcggcaaaagtggcgactcgactcactcgtcgatgcgcatcaaacag
gagccgagtttgatgatgagttcggccagcggaactggcgagtcgtcgttggccgatttg
gactcgttgacggatctcttttccctgccgtccgacatgaagctggacattgacacgttg
gccgccgacgatctcgactcgatcgattcggcctccctttcatccggctcccatttcgag
ttctcctgcacgcctgacgtcaacgacatgctcatggatatcggcgtctccaacgactgg
gtcgacaagagtttcgccaatctcatcgactgctag

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