Daphnia pulicaria: 124342536
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Entry
124342536 CDS
T08670
Name
(RefSeq) transcription factor SOX-11-like
KO
K23581
transcription factor SOX4 (SOX group C)
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dpz03000
]
124342536
Transcription factors [BR:
dpz03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124342536
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
124342536
NCBI-ProteinID:
XP_046651450
LinkDB
All DBs
Position
6:complement(11101978..11112044)
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AA seq
571 aa
AA seq
DB search
MRERKSRRSATTTTSDSSAMVPQQQTNGSRADSPSNHVPKFGSQLVDRKSSTPYSDATQT
KKNNPNHIKRPMNAFMVWSQIERRKICEIQPDMHNAEISKRLGKRWKTLSEEERQPYISE
AERLRQLHMQEYPDYKYRPRKKAKLSTSGSASPSSSLSPSSSSSSHAMPASPVSHSSNSN
SSIGSGGGGGGLSSLKALGDHRRTMTSSKGRTSSAVVTSGPCGTLLTTNHTNNNSHSTPN
QNGHHHGFASLAKMTSSSSSSSSSRARITQTLGGLSTVNHNRLKLRLTIDRKFKESIRNS
KNVPTALLAVSTKSSTTTTAVAQPPAKVPSSPSSASFPDSPASLTMYEESSAGHHHHNNH
HLHNVAVVRGDSPISGLITPPTSSSSSSPSSNSNGGSGGQSLLSLGSFGIKSEPGVLVAT
LTPEPDVESDDMDESPSHHHFGLQSMVGGVNGCNNGGGGGSGGVGGKSGDSTHSSMRIKQ
EPSLMMSSASGTGESSLADLDSLTDLFSLPSDMKLDIDTLAADDLDSIDSASLSSGSHFE
FSCTPDVNDMLMDIGVSNDWVDKSFANLIDC
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaagaaagagccgaagaagcgccacgacgacgacgagcgacagcagcgccatg
gttcctcaacagcagacgaatggcagcagggccgatagtcccagcaaccacgtaccgaaa
tttggctcgcaacttgtggatagaaaatcttcaacgccatactcggatgccactcagacg
aagaagaacaacccgaaccacatcaagcgaccgatgaacgcgttcatggtgtggtctcag
attgagaggcgcaagatctgcgagatccagccggacatgcacaacgccgagatctccaag
cggctgggcaagcgctggaagactttgtcggaggaggagcgtcagccgtacatttccgaa
gccgagcggctccgtcagttgcacatgcaggaataccccgactacaagtacagaccgcgc
aagaaggccaagttgagtacgagcggcagcgccagtccgtcctcgtccttgtcgccgtct
tcatcttcctcgtcgcacgccatgccggccagccccgtcagccactcgagcaacagcaat
agcagtatcggcagcggtggtggcggcggtggcctcagcagcctcaaggcacttggcgac
catcgaaggacaatgacgtcgtccaaaggccggaccagcagcgccgtggtgacttcggga
ccttgtggcactctgctgacgacgaaccacacgaataacaacagccacagcactcccaac
cagaatggccatcaccacgggttcgcctcgctggccaagatgacgtcgtcctcgtcgtcg
tcgtcgtcgtcacgggcgcgcatcacgcaaaccttgggcggcctcagcaccgtcaatcac
aaccgcctcaagttgcgtctgacgatcgaccgcaagttcaaggagagcatccgcaacagc
aaaaacgtcccaacggctctgctggccgtcagcactaagtcgtcgacgacgacgacggca
gttgcacaaccgccggccaaagttccgtcgagcccctcgtcggcctcgttccccgactcg
cctgccagtctgaccatgtacgaggagtcgtctgctggacaccaccaccacaacaaccac
cacctccacaacgttgccgtagtcagaggagactcgcccatctctggattgatcactcca
cctacctcttcttcatcatcgtcgcccagcagcaacagcaacggcggctccggcggtcaa
tcgcttctcagcctgggctcgtttggcatcaagagcgagcccggtgtcttggtggccact
ttgactcccgagccggacgtcgagtcggacgacatggacgaatcgcccagtcaccaccat
ttcggtcttcaatcgatggtcggaggcgtcaacggttgcaacaacggcggcggcggcggc
agcggcggagtgggcggcaaaagtggcgactcgactcactcgtcgatgcgcatcaaacag
gagccgagtttgatgatgagttcggccagcggaactggcgagtcgtcgttggccgatttg
gactcgttgacggatctcttttccctgccgtccgacatgaagctggacattgacacgttg
gccgccgacgatctcgactcgatcgattcggcctccctttcatccggctcccatttcgag
ttctcctgcacgcctgacgtcaacgacatgctcatggatatcggcgtctccaacgactgg
gtcgacaagagtttcgccaatctcatcgactgctag
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