Daphnia pulicaria: 124342809
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Entry
124342809 CDS
T08670
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
dpz
Daphnia pulicaria
Pathway
dpz03020
RNA polymerase
dpz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
124342809
09124 Replication and repair
03420 Nucleotide excision repair
124342809
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dpz03021
]
124342809
03400 DNA repair and recombination proteins [BR:
dpz03400
]
124342809
Transcription machinery [BR:
dpz03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
124342809
DNA repair and recombination proteins [BR:
dpz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
124342809
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
DUF4611
Motif
Other DBs
NCBI-GeneID:
124342809
NCBI-ProteinID:
XP_046651939
LinkDB
All DBs
Position
6:complement(23216200..23217457)
Genome browser
AA seq
274 aa
AA seq
DB search
MPYANQPNLKLTELTEENVKFQISDTDLSVANSLRRVFIAETPTLAIDWVQFEANSTVLF
DEFLAHRVGLIPLTSDDSVEKMQYSRDCTCPDFCVDCSVEFTLDVKCSEDVTRNVTTADL
KSTDPRVVPATSKRDEEPPDDNDNEILIVKLRKGQELKMRAYAKKGFGKEHAKWNPTAGV
AFEYDPDNSLRHTLFPKPEEWPRSEYSELGESDQHEAPYDSDGKPNKFFVNVESCGSLRP
ENIVLMGIAILKKKLSDLQTQLSHEVQNDALAIN
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccctacgccaatcaaccaaatctcaaattgaccgaactaacagaggaaaatgttaaa
tttcagatttcagacacagaccttagtgtagcaaactctctgaggcgagtcttcattgct
gaaacccctacattagccattgattgggttcagtttgaagcaaattccactgtcttgttt
gacgaatttttggcacaccgtgtgggtcttattccactgactagtgatgactctgttgaa
aagatgcagtattccagagactgcacttgtccagatttctgtgttgattgctcagtggag
tttactttggatgttaaatgttctgaggatgttacacgcaatgtcaccactgctgatcta
aagagtactgatccaagagtggtcccagctacctccaaacgggatgaagagccaccagat
gacaatgataatgaaattttaattgtcaagcttcgtaaaggacaagaactcaaaatgcgg
gcatatgccaagaaaggttttggtaaagaacatgcaaaatggaatccaactgctggagtg
gcctttgagtacgaccctgataattcattgaggcatactttgttcccgaaacctgaagaa
tggccaaggagtgaatattcggagctgggcgaatcagatcaacatgaagccccttacgat
tctgatggcaaacccaacaaattttttgttaacgtggaatcttgtggatctttacgacca
gaaaatattgtcttaatgggaatcgctattctcaagaagaaactttctgatttgcagacc
caattgagccacgaagtgcaaaacgatgccctcgccatcaactga
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