Daphnia pulicaria: 124343044
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Entry
124343044 CDS
T08670
Name
(RefSeq) nuclear pore complex protein Nup54-like
KO
K14308
nuclear pore complex protein Nup54
Organism
dpz
Daphnia pulicaria
Pathway
dpz03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124343044
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpz03019
]
124343044
Messenger RNA biogenesis [BR:
dpz03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124343044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
Crescentin
DUF7344
Motif
Other DBs
NCBI-GeneID:
124343044
NCBI-ProteinID:
XP_046652113
LinkDB
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Position
6:8032951..8040801
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AA seq
608 aa
AA seq
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MAFSSGSLFQPTQSTTSNTGGLFGGTGQTGTTPFGGFGVQQVSTANQSFSFGTPQNSAPT
SGFGSQQTNTTATVPSFGFGSTQPTSGAPAFGFGTTQTSTAAPSFGFGATQTNTTTPAFG
FGGTNTGGAPSFSFGQPQTSNAGFGFGTGAPAVSSSSGLFSGTGFGSFGTSLGGTGITTP
ASSSFSLGTTFGSTAPTTGLFGQQQQQTFAPAQQAGTAVESVLSSVLYCNIYGDERDAIL
ARWNLLQAAWGTGKGFYSGTASAIQYTAENSLCRFKAIGYSKLPQGKNEDGIIVLLFNKP
ETDIRRDQAQLVSVITTALGNKPNLNVSVEGVSGLDTNKTEVLICVQERSATGAIHKVPA
IELSNFLWNQQPSGMMQSARGQLSALGVVSCVPRVRPSPEQLREYLASPPAGIDARIWKQ
AQSENPDHDNFIPIPLIGFGDLVRHLHLQEKETRRHQGTLDKLAEELASLQSRASETSVA
LSEQRRRYIDLQHRILKVLIKQECSRKEGFALQPEEERLRVQLESVHNELSIPTQFRGRL
NELLSQIRMRQSAFTPAERMTERYNIEPNVLDDLKQVLKSQQEGMAQLMNVLKEDFNDLL
VLDNALKH
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggcattttctagtggaagtcttttccaaccaacccagtctactacatccaatacagga
gggctgtttggaggaactggtcagactggtactactccatttggaggctttggtgtgcag
caagttagcacagcaaatcagtccttttcatttggaactcctcaaaattctgctccaaca
tcgggatttggctctcaacaaactaacaccactgcaacagtaccttcttttggttttggc
agtacccaacctacttcaggtgctccagcgtttggatttggtaccacccaaactagcaca
gctgctccatcgtttggatttggtgcaacacaaacaaataccactacacctgctttcgga
ttcggtggaactaatactggtggagctccatcattcagctttgggcagccacagacaagc
aacgctggattcggttttggcactggagcccctgctgtctcatcgtcgtccggacttttc
tctggaacaggatttggatcttttggaacatccctgggaggaaccgggataacaacacca
gcttctagtagcttttctttgggaactacatttggaagtacagccccaacaacagggctg
tttggtcaacaacaacaacaaacgtttgctcctgctcagcaagccggtactgctgtcgaa
tctgttctctcatccgtactttactgtaacatttacggtgatgagcgcgatgcaatcttg
gctcgttggaatctccttcaagcagcttggggaaccggaaaaggattttactctggcacg
gctagtgctatccaatatactgcagagaattcattgtgtcgctttaaagccattggctac
agcaaactaccacaaggaaagaatgaagatggaataattgttttgctgtttaacaaaccc
gaaacagatattcggcgagaccaagctcagttagtcagtgtgataactacggcgctgggc
aataaacccaatctgaatgtgtccgtcgagggcgtgtctggcctggacacaaataagaca
gaggttttgatttgtgttcaagaacgctcagcaactggcgcaattcataaagtgcctgcc
attgaattgtctaacttcctttggaatcaacaaccatctgggatgatgcagtcggctcgt
ggtcagctcagcgcacttggagtcgtttcgtgtgttcctagagtccgaccgtcacccgaa
caattgcgcgaatatctagcatcgcctccagctgggattgacgctcgcatttggaaacaa
gctcaatcagaaaatcctgatcacgataacttcatacccataccactgatcggatttggt
gaccttgttcgtcatttacacctacaggagaaagagactcgacgacaccaaggaaccctg
gacaagttagctgaggaattagcaagtctgcaatctcgtgcatcagaaacatcggttgcg
ctaagtgaacagcgacgacgatacatcgacttgcaacatcgaatcctcaaagttcttata
aagcaagaatgttctcggaaagaaggttttgctctacagcctgaagaggaacgtttgcgg
gtgcagctagagtctgtgcacaatgaactaagcatccctacacaatttcgaggtcgctta
aacgaattgctttcgcaaataagaatgcgccaatctgcctttacgccagcggaacgaatg
actgagaggtacaacattgaaccaaatgttttggatgatctaaaacaagtccttaagtca
caacaagaaggaatggctcagttaatgaatgtattgaaagaagatttcaatgatttgctt
gttttagataatgctttgaaacactaa
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