Daphnia pulicaria: 124343182
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Entry
124343182 CDS
T08670
Name
(RefSeq) WD and tetratricopeptide repeats protein 1-like
KO
K11807
WD and tetratricopeptide repeats protein 1
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpz04121
]
124343182
Ubiquitin system [BR:
dpz04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
124343182
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EML
TPR_19
WDR55
TPR_17
Beta-prop_EIPR1
Beta-prop_IFT122_1st
TPR_1
ANAPC4_WD40
TPR_2
Beta-prop_WDR19_1st
TPR_6
NBCH_WD40
TPR_14
Beta-prop_SCAP
TPR_11
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
TPR_16
ANAPC3
SH3-C_UBE2O
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
124343182
NCBI-ProteinID:
XP_046652356
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Position
6:complement(10468326..10471738)
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AA seq
683 aa
AA seq
DB search
MEEHKWLSDSLVMRYLRSKEINDSLRLVHQSKLSSMKSLIDRLGLDYELTGHGGCVNCLE
WNSDGSILASGSDDLHIILWNPFLKKKIANIDTGHQGNIFSVKFMPQSMDGLVASAAGDG
RVKIHWVDHAQSMNSTPQTSLQCNCHVGRVKRLATAPDIPYLLWSGAEDGTVMQFDLRTP
HTCTNGPSNILINLLSHMGKQAEVKSIAINPIRTEQLVVGANDPFIRLYDRRMIKITSVP
FSAERPNRGRQYSLATNSQSEESRSAIPLGCAQYFAPGHLPQKLDDYRRRFRSLASTYVT
FDPSGRYLLANLGGEQIYLYDCLTPNPPITQVPLLGKEPLNGIKGFTLPPDIEQIKIQAN
AAFQQRQYTTAIGLYSKALIKAPNSPVLYSNRATACMKRNWDGDTYAALKDCISALKIDP
NQIKPFHRLARCLLDLGQVVLADQAFKLLRERFPQQANSSTFNTLHVEVQKKLELEEQRS
EKETARRGELDDESDLLEDGDNSPSLTENEKNWRAQYWDYSSRYCGHCNTTTDIKEANFF
GNDGQYILAGSDDGCFFIWDRNTGIVERVLRGDESIVNCLQPHPFTCMLASSGIDSVVRI
WSPLPQERVVSDRLGSVVLDAESAAMANQRRMNADPFEMFLMNMGATAEDAMPDITVRPR
RPASSPDDDQDEDPRAAIQCRQS
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atggaggaacacaaatggttgagtgattctttggtgatgcgttatttgagatccaaagag
ataaacgactcattacggttggtacaccaatctaagttgtcatccatgaaaagtctgatt
gaccgacttggtctagattacgaacttactggtcatggaggctgtgttaactgtctggaa
tggaacagtgatggttcaattttagcatctggttcagatgaccttcacatcatactctgg
aatccatttttaaagaaaaaaattgctaatatagatacaggtcatcaaggcaatattttt
tctgtgaaattcatgccacaatcaatggatggcttagtagctagtgcagctggagatgga
cgagtcaaaatccattgggtggaccatgcacaatctatgaattccactcctcagactagt
ctgcaatgtaattgtcatgttggtcgtgtcaaacgtttggcgacagctcctgatatcccc
tacctactttggagtggggctgaagatgggaccgtgatgcaatttgacttgaggacacct
cacacatgtacgaatggtccgtccaacattcttattaatttactaagccatatgggaaaa
caggctgaagtaaaatcgatcgcaattaatcccattcggaccgaacaacttgtcgttgga
gctaatgatcctttcatacgcctgtatgacagacgaatgattaaaatcacatctgttccg
ttttccgcagaaaggcccaaccgaggtaggcaatactcattggcaactaattcacaaagt
gaagaaagtcgttcagctattccgcttggatgtgctcaatatttcgctccgggtcatctg
cctcagaagttggatgattaccgtcgccgttttcgctcgttagcgtcgacgtatgttaca
ttcgatccgtcaggtcgctatcttttggcgaatttaggaggcgaacagatttatttgtat
gattgcctaacaccaaatcccccaattactcaagtgcctcttttgggtaaagaaccttta
aatggaattaaaggtttcacgttacccccagacatagaacaaataaaaattcaggccaac
gcggccttccagcaacggcagtacactacagccattggattgtacagcaaagctctcatc
aaagcaccaaattcgccagtcttgtacagtaatcgcgcaacagcttgcatgaaacgtaat
tgggacggagacacgtatgctgctctcaaggattgcattagtgcattgaagatcgaccct
aaccaaatcaaaccctttcaccggttagcacgctgtctattagatcttggccaagtggtt
ttggccgaccaggcattcaaattgctcagggaaagatttcctcaacaagccaatagttcc
acgttcaatactcttcatgtcgaagtccagaaaaagcttgagcttgaagaacaacgttcc
gagaaggaaactgctcggagaggagagttggatgatgaatctgatttattggaagatggg
gacaattctccgagtttaacagaaaacgaaaaaaattggagggcgcaatactgggactac
tccagccgttattgcggtcattgcaatactaccactgacattaaagaagccaattttttt
ggaaacgacgggcagtatattctagctggatcggacgacggatgtttttttatttgggat
cgtaacactggaatcgttgaacgagtgctgcgtggtgatgaatcgatcgttaattgtctt
cagcctcatcctttcacatgtatgttggcctcatcggggatcgattcggtggttcgcata
tggtctccgctaccacaggaaagagtcgtctcagatcgtttggggagtgtggtacttgac
gcggaatcagcagcgatggccaatcaacgacgcatgaatgccgaccctttcgaaatgttt
cttatgaacatgggtgcgacggctgaggatgccatgccagatattacagttcgccctcgt
cgtccagcctcatctccagacgatgatcaggacgaagatcctcgcgcagccatccaatgt
cgacaaagttaa
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