Daphnia pulicaria: 124343281
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Entry
124343281 CDS
T08670
Name
(RefSeq) cleavage stimulation factor subunit 2-like
KO
K14407
cleavage stimulation factor subunit 2
Organism
dpz
Daphnia pulicaria
Pathway
dpz03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124343281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpz03019
]
124343281
Messenger RNA biogenesis [BR:
dpz03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
124343281
U7-dependent histone pre-mRNA processing factors
124343281
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_7
RRM_10
DUF8400
RRM_occluded
Utp12
SAM_SMF
Motif
Other DBs
NCBI-GeneID:
124343281
NCBI-ProteinID:
XP_046652509
LinkDB
All DBs
Position
6
Genome browser
AA seq
381 aa
AA seq
DB search
MATDPQVVIDKSLRSVFVGNIPYDVTEEKLKDIFSEAGPVVSFKIVYDRETGKPKGYGFC
EYRDQETALCAMRNLNGYEIAGRTLRVDNACTEKSRLEMQSLMQEKTTESPYGDAVDPTQ
APEMISKAVSSLPPEQMFELMQQMKQCMQNNPNEARQMLLQNPQLAYALLQALVVIRVVD
PSTALSMLQKGPGQTDVGMGGQHFAKTSNFPMPSQDLDLRHADPRMVRGDHDLRVPPAAP
MAVGGIGLPPTMQQQPPARPAQTMPEMDSRRDPRSSGPTGPRDPRAGMSRPGPGVPPIPA
SQPNVPPPVLPSGGGGLNVPVAAAPTAGAIGRALGPGTSDQEKAALIMQVLQLSDEQIAL
LPPEQRQSIMVLKDQIARSNR
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atggctaccgatccccaagttgtaatagacaaatctttgcgatccgtctttgtgggaaac
attccttatgatgtcacagaagagaaactcaaagatattttcagtgaagctgggccagta
gtttcattcaagattgtttatgatcgtgaaactggaaagcccaaaggatatggattctgt
gagtatcgtgatcaggagacagctctttgtgcaatgagaaaccttaatggttatgaaata
gctggaaggacattgagagttgataatgcttgcacagaaaaatcgcggcttgaaatgcaa
agtctaatgcaggaaaaaacaacagagagcccctatggtgatgctgttgacccaactcaa
gcacctgaaatgatttcaaaggctgtgtcatctcttccacctgagcagatgtttgagctg
atgcaacagatgaaacagtgcatgcaaaataaccccaatgaagcccgccagatgcttttg
cagaacccgcaacttgcctatgccctactccaagccttggtcgtcatacgcgtagttgac
cccagcactgcacttagcatgctgcagaagggtccgggccagaccgacgtgggaatggga
ggacagcactttgccaaaacatccaactttccaatgccaagtcaagatttggatttacgt
catgctgatcctcgaatggtacgaggcgaccacgatttgcgagtaccaccggccgctccc
atggctgtaggaggaataggactgccaccaacgatgcagcaacagccgcccgcaaggcct
gcacagactatgcctgagatggattcgaggcgtgacccgcgttccagtggtccaaccggt
ccacgcgacccacgagcagggatgagcaggccgggtcccggtgtacctcctattccagca
tctcagccaaacgttcctccacctgttttacctagcgggggaggtggacttaatgtgcca
gttgctgctgctcctacagcaggagctattggacgtgcactggggccaggaacttcagat
caagaaaaagctgctctgattatgcaagtccttcaactgtctgatgagcaaatcgctcta
cttccaccagagcagcgccagagcattatggttcttaaggatcaaattgctagaagcaat
cgttaa
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