Daphnia pulicaria: 124343299
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Entry
124343299 CDS
T08670
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
dpz
Daphnia pulicaria
Pathway
dpz04120
Ubiquitin mediated proteolysis
dpz04137
Mitophagy - animal
dpz04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124343299
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
124343299
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
124343299
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpz04121
]
124343299
Enzymes [BR:
dpz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124343299
Ubiquitin system [BR:
dpz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
124343299
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf_C2H2_6
Motif
Other DBs
NCBI-GeneID:
124343299
NCBI-ProteinID:
XP_046652548
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All DBs
Position
6:10440050..10441908
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AA seq
331 aa
AA seq
DB search
MLLTKKEEPLLRSRRPPSMPKNNSKFCTEITFPTSCSDSNLSRMSFLKQEGSKSRSSISS
ISSSTSTLGSGSVSGSTVASSADLASFFECPVCFEYVLPPILQCPSGHLVCSNCRPKLTC
CPTCRGPLGNIRNLAMEKVASTVSFPCKFSTSGCQFTMLHTAKGDHEETCEYRPYSCPCP
GASCKWQGALEQVMPHLLNQHRSITTLQGEDIVFLATDIALPGAVDWVMMQSCFGHHFML
VLEKQEKYDGLQQFFAIVQLIGTRKQADNFAYRLELSGHRRRLTWEATPRSIHEGVSSAI
LNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgttgttaacgaagaaggaagaacccttgttgagatcacggaggccaccttctatgcct
aaaaacaacagtaaattctgtactgaaataacgtttccaacatcctgcagtgattctaat
ctcagcaggatgagttttctcaagcaagaaggttccaaaagtcgttcaagtatttcaagt
atttcttcatccacatccacacttggttctggatcagtctctggttctacagtagcttcc
tcagcagacttggctagcttctttgaatgcccagtttgtttcgagtatgttcttccacca
atcctacaatgcccaagtggtcatctggtctgttccaactgtagaccaaaactcacctgc
tgcccaacctgcagaggacccttaggcaatataagaaatttagctatggaaaaagtggct
tccacagtttcttttccttgcaaattttctacttctggatgccagtttacaatgttgcac
acagctaaaggagatcatgaagagacttgtgaatatcgaccttattcttgtccgtgtccg
ggggcgtcctgtaaatggcaaggagctttagagcaagtaatgccccatttgctcaatcaa
catcgatctatcacgactctccaaggagaagatattgtttttttagcaacagatatcgca
ctccccggcgccgtcgactgggttatgatgcaatcttgttttggtcaccattttatgcta
gtgctggaaaagcaagaaaaatatgacgggttgcaacaattttttgctatcgtccaattg
attggcacaagaaagcaggccgataactttgcctaccgattggaattgagcggtcaccgt
cgacggttaacgtgggaagcgacgccacgctccattcacgaaggcgtatcttccgccatt
ctaaactcggactgcctcgtttttgacacctctatcgcccagttgtttgctgaaaacggc
aatttgggtatcaatgttaccatttctatgtgttaa
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