Daphnia pulicaria: 124343310
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Entry
124343310 CDS
T08670
Name
(RefSeq) probable tRNA pseudouridine synthase 1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dpz03016
]
124343310
Enzymes [BR:
dpz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
124343310
Transfer RNA biogenesis [BR:
dpz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
124343310
Prokaryotic type
124343310
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Glyco_tran_10_N
Motif
Other DBs
NCBI-GeneID:
124343310
NCBI-ProteinID:
XP_046652570
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All DBs
Position
6:10822145..10823605
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AA seq
284 aa
AA seq
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MAFNRLQGIFPVFKPQNITSSQLLELIKMQLKRDANSNAPIKMGHGGTLDKNATGILVVG
INEGCAQLPAFLDGSKVYFGNCVFGRATDTYNNEGQTTMEKPYDHITLTEINDFKAAIKG
EVLQKPPPYSALKLQGRRLSDLAREGVPVDPKPRLVTCYDFTVIEFAPPKLTFELSCSKG
FYVRSLVHDLGIVLNSCAYLDTLERTRQGPFETQHCLTEEQCTVTGIRKKILEMQQVTRE
YLDIQMEKYRLRNSLQSQNQKFVNRKYFESSIHNKKYDQWDYAK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaatcgattacaaggtatctttccagtgttcaaaccacaaaatatcacctct
tctcaactgctagaattaatcaagatgcaattaaaaagagatgccaatagtaatgcccct
attaaaatgggtcatggaggaactttggataaaaatgcaactggtattctggttgttgga
atcaatgaaggatgtgcacaattgccagccttcttagatggatcaaaagtctatttcggt
aattgtgtgtttggtagagcaacagacacctacaacaatgaaggccaaaccacaatggaa
aaaccatatgatcacattactctcaccgaaataaatgatttcaaagcagcaataaaaggt
gaagttttacagaaaccacctccttactctgctttgaagttgcaaggtagaaggttgtct
gacctagccagagagggtgttccggtagatccgaagccaagattggtgacttgttacgac
tttaccgttattgagtttgctcctcccaagcttacatttgaactttcttgtagtaaagga
ttctatgtacgaagcttagtccatgatttaggaattgttttaaacagctgtgcttacctc
gacacgctggagagaactcgccaaggtccgtttgaaactcagcactgtcttacggaagaa
caatgcacggttaccggtatccgcaaaaaaattcttgagatgcaacaggttacacgcgag
tatctagatattcaaatggaaaagtatcgtttaagaaattcccttcaaagtcaaaatcaa
aaatttgtcaaccgaaagtattttgaatctagtatacataataaaaagtatgatcaatgg
gattatgctaaataa
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