Daphnia pulicaria: 124343330
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Entry
124343330 CDS
T08670
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1B-like
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
dpz
Daphnia pulicaria
Pathway
dpz04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
124343330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dpz04131
]
124343330
Membrane trafficking [BR:
dpz04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
124343330
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
V-SNARE
Sec20
DUF4504
Cir_Bir_Yir
DUF3958
Motif
Other DBs
NCBI-GeneID:
124343330
NCBI-ProteinID:
XP_046652603
LinkDB
All DBs
Position
6:complement(10048899..10049901)
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AA seq
228 aa
AA seq
DB search
MSSEKFETLDEDVQVLLEILQKKCSGKLEQCFGEEKKQVIADVERGLDEARQAIFEMEAE
ARAAPGSFRMDMIGRVRRHQDTCSKLALLIKSSKQAEMSLASSRGTLLENQSTAAFSQNR
GIDNALQTTVRQGTAVLERTSQSLYRTTQVALESEEIGTGVIQELSQQREVLVRTRDRLT
ETDAELGRSRRILKSMSRVAMTNKLVLIVIILLEICILTGLVYYKFFS
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgagctcagagaaatttgaaactctggatgaagatgtacaagttttgctcgaaattctg
caaaaaaagtgttccggtaagctagaacaatgttttggcgaagaaaaaaagcaagttatt
gccgatgtcgaaagaggactagatgaagctagacaagcaatatttgaaatggaagctgaa
gctagagcagctcctggctcttttaggatggacatgattggcagagtacgaagacatcag
gacacctgttccaaacttgctctattgataaaatcttccaagcaagcagaaatgtctctg
gcctcatcaagaggaacactgttggaaaaccaatccactgctgcatttagccaaaaccgg
ggcattgataatgctcttcaaacaactgttcgccaaggaactgcagttctggaaagaaca
tcacagagcctctacagaactactcaggttgctttagaaagtgaagagattggcactgga
gttattcaagaattaagtcaacaaagagaagtgcttgttcgtacaagagatagattgact
gaaacggatgcagagctgggaagaagtagaagaatccttaagtcaatgtctcgtgttgct
atgactaataagcttgtcctaattgtcatcattctgttggagatatgcattttgacaggt
ttagtttattataaatttttttcttga
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