Daphnia pulicaria: 124343514
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Entry
124343514 CDS
T08670
Name
(RefSeq) E3 ubiquitin-protein ligase MIB1-like
KO
K10645
E3 ubiquitin-protein ligase mind-bomb [EC:
2.3.2.27
]
Organism
dpz
Daphnia pulicaria
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dpz04121
]
124343514
Enzymes [BR:
dpz01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124343514
Ubiquitin system [BR:
dpz04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124343514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SH3_15
Ank_5
Ank_4
MIB_HERC2
Ank_3
zf-C3HC4_3
ZZ
zf-C3HC4_2
Sina_RING
Prok-RING_4
Peptidase_M16
Motif
Other DBs
NCBI-GeneID:
124343514
NCBI-ProteinID:
XP_046652794
EnsemblRapid:
LOC124343514
LinkDB
All DBs
Position
6:9300014..9338315
Genome browser
AA seq
1037 aa
AA seq
DB search
MDITPAPSNRANRFMLEGVGTRVIRGPDWKWGKQDGGEGHVGTVRNFESPEEVVVVWDNG
TAANYRCCGAYDLRNLDSAPTGIKHEGTMCDTCHQQPIYGIRWKCAECTNYDLCSICYHS
DKHHLRHRFYRITTPGTERVLLEPRRKSKKIGIRGIFAGARVVRGVDWQWEDQDGGNGRR
GKVTEIQDWSAASPRSASYVIWDNGAKNLYRVGFEGMADLKVVNDAKGGTVYRDHLPLLG
EQGPGRSGLHGFAISDQVNVDLDLELVQTLQHGHGGWTDGMFECLGTTGTVVGIDEDHDI
VVSYPSGNRWTFNPTILRVVVSSPPPGNSNVDVQLQFSVGDLVQICSDLERIKILQRGHG
EWAEAMAPTLGKVGRVQQIYHDNDLKVEVCGTSWTYNPAAVTKIASDGSLPGASNGENLS
ALLKKLFETHVTGDVHEELVKAAANGDTQKVEEILKRVDADVNGVFAGHTALQAASQNGH
LEVIKVLLRYKADVEIEDKDGDRAVHHAAFGDEPSVMEVLAQSGADLNARNKRRQTALHI
AVNKGHVGVVKTLLELGCHPSLQDSEGDTPLHDAISKKRDDMLTLLIDHNADITLTNNNG
FNALHHAALRGNPSAMRVLLSKLPRPWIVDEKKDDGYTALHLAALNNHVEVAELLVRAGR
AQLDLQNVNLQTALHLAVERQHTQIVRLLVRENCSLNLADKDGDTPLHEALRHHTLSQLR
QLQDLQDGSGKTSTATSGHNYSLLMGLGTQGANKKSSASIACFLAANGADLTIKNKKGLT
PLDLCPDPNLCRALTKCYGEKSTRGECGAHGDTLSQEMGAVALADMACDLGDTADECMVC
SDLKRDTLFGPCGHVNCCSACAPRVKKCLVCKDPITTRTKIEECVVCSDKKASVLFRPCG
HMCACDGCAALMKKCVQCRSQIDRVIPYVVCCGLNNQASLSPGCRSPISAEIGRPAGISP
QEGPMMNNGCRDNSNTDVQKLQQQLQDIKEQTMCPVCMDRLRNMIFLCGHGTCQMCGDRM
SECPICRKAVEKRILLY
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggatatcactcccgccccatctaatagagcaaaccgttttatgttagaaggcgtaggg
actcgtgttattcgtggacctgactggaaatggggaaaacaagatgggggtgaaggccat
gtgggaactgtgagaaattttgaatctcctgaagaagtggttgttgtctgggataatggg
actgctgccaactatcgttgttgtggagcttatgatctgcgcaatctagatagtgctcca
actggcattaaacacgaaggaacaatgtgtgatacatgtcatcaacaacccatatatggg
atccgatggaagtgtgcagaatgcacaaactatgacctgtgttcaatatgttatcatagt
gacaaacaccatcttagacatagattttacagaatcacaactcctggtactgaaagggtt
ttgcttgaacccaggcgaaaaagtaagaaaataggaatccgtggtatttttgctggtgca
cgcgttgtccgaggagtagactggcaatgggaggatcaagacggcggaaatggcagacgt
gggaaagtaacagaaatacaggactggtcagctgctagtcctcgatcagcttcctacgtt
atatgggataacggtgctaaaaatctctaccgcgttggtttcgaaggaatggccgatctg
aaagttgttaacgatgccaaaggtgggacggtctacagagaccatctaccactgttgggt
gaacaaggtccaggacgttctggccttcatggatttgctattagtgaccaggtcaatgtc
gacctagatttagaattggttcaaacattacagcacggccacgggggttggactgacggc
atgtttgaatgtcttggaacaaccggcactgttgtgggaatcgacgaagaccacgatatt
gtagtatcttatcctagtggcaatagatggacgttcaacccaacaatccttcgagttgtc
gtatcaagcccaccgccgggaaactcaaacgttgacgttcaattgcaattttctgttggg
gacctagttcaaatttgcagcgatcttgagcgcataaaaattttacagcgtggacatggc
gaatgggcagaagccatggcaccgacattaggaaaggttggccgtgtccagcaaatttat
cacgacaacgatctgaaagtggaagtctgtggtacatcctggacgtacaacccggcagct
gtgactaaaattgcttctgatggttctttgccaggagccagtaacggagaaaacttaagt
gctttgttaaagaagttgtttgaaactcacgttactggagatgttcacgaagaattggtc
aaagccgctgccaacggagacactcagaaagttgaagagatcctcaagcgagtagatgct
gatgtcaatggagtgttcgcaggacacacggcccttcaagcagccagccaaaacggtcat
cttgaagtgatcaaagtgctactgcggtacaaagccgacgtcgaaatcgaggataaagat
ggagaccgtgccgttcatcatgcggccttcggcgatgagccatccgttatggaagtattg
gcgcaaagtggagcggatctcaatgcccgtaataaacgccgccagacagcgctgcacatc
gccgtcaataaaggccatgtcggcgtcgtcaaaacgctgcttgagctaggttgccacccc
agcttacaggactctgaaggagatacgccgctgcacgacgccatttccaagaagcgggac
gacatgctgacgcttctcatcgaccacaatgccgacatcacgctcaccaacaataacgga
ttcaatgccctgcatcacgccgctctgcgaggcaatccaagtgcgatgcgcgtcctgctg
tccaaattgccacggccgtggatcgttgacgagaagaaagacgacggctacacggccctc
catttggcggcgctcaacaatcacgttgaagtcgctgagctacttgtccgcgccggccgg
gctcaacttgatttgcagaatgtcaatttgcagacggccttgcatctggcagtcgagcga
cagcacactcaaatcgttcggctgctggtgagggaaaactgcagcctcaacttggccgac
aaagatggtgacactccactgcacgaggctctacgtcaccacacgctttcccagttgcga
cagctccaagatttgcaggacggcagcgggaaaacctcgacggccacgtccggtcataat
tactcgctgctgatggggctcggaacacaaggtgccaacaaaaagtcgtcggcctcgatt
gcctgtttcctcgcagccaacggagccgacctgaccatcaaaaacaagaaaggattgact
cctctggatctctgcccggatcctaatctatgtcgggcgttgaccaaatgctacggagag
aaatccacgcgtggcgagtgcggtgctcacggcgacacgttatcacaagagatgggcgcc
gtggctttggccgacatggcctgcgacctcggcgacaccgccgacgagtgcatggtctgc
tcggacctgaaacgtgacactttattcggaccttgcggtcacgtcaattgctgctcggcc
tgcgctcctcgcgtcaagaaatgcctcgtctgcaaggatcccataacgacccgcaccaag
attgaagagtgcgtcgtgtgctcggacaagaaggcgtccgtgctgttccgtccctgcggc
cacatgtgcgcctgtgatggctgcgccgctctcatgaagaagtgcgtccaatgtcgctcg
caaatcgatcgcgtcatcccctacgttgtctgctgcggcttgaacaaccaggccagcctc
tcgcccggctgtcgtagcccgatcagcgccgaaattggccgtccggcagggatttcaccc
caggagggaccgatgatgaataacggatgtcgagataacagcaacacggacgtccagaag
ctccagcagcagctccaggatatcaaagaacaaacgatgtgtccggtctgcatggaccga
ttgcgcaacatgatcttcctctgcggtcacggaacgtgccaaatgtgcggcgatcgcatg
tccgagtgcccgatctgccggaaggcagtcgaaaaacgcatcctgctctactag
DBGET
integrated database retrieval system
