Daphnia pulicaria: 124343543
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Entry
124343543 CDS
T08670
Name
(RefSeq) collagen alpha-1(III) chain-like
Organism
dpz
Daphnia pulicaria
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Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
124343543
NCBI-ProteinID:
XP_046652842
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Position
6:6633737..6636506
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AA seq
541 aa
AA seq
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MKAVAILPFLVATVLAAPQYGPAPQVAEQTAPVTADQWASLNPYGSNSNAYPAEERPQIE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NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcagtagcaattctaccatttttggttgcgacggtcttggctgctccgcagtat
ggacctgcaccacaagtcgccgagcaaacagctccagtcacagctgatcaatgggcttca
ctaaacccttacggaagcaattccaatgcttaccctgccgaagagaggcctcaaattgaa
gaaatccagaggcagtgggccaaattccttgagtacttgccatggctcaagggacctgct
ggcccacctggtcctcctggtgctcctgggactgctggttctgctggagcttcttccggt
ggttatggtggtagctacagccaaccccaacaaactacggtagttggaccaccaggacca
cctggcgcccctggacctgctggaccgaagggagaaacaggaaatgctggaaatccagga
acacctggaggacccggacctgttggccctgccggacttaatggtggacctggtggacct
ggaccagcaggcgaacgtggctctaatggagctcccggcgctcctggaggtccaggagga
ccaggagctaagggagaagccggccttaacggagcacctggtcgaaatggagctcctgga
acacctggtaaagatggctttaacggactacctggattcgcaggacccaagggcgaagct
ggctcacccggagtaactttgccctcaaatcaacctggacctgccggtgctcctggcgct
cctggcaaagatggagctccaggttttcctggcggtcccggacctgtcggtcctgttggt
ccagctggcccagtcgggccagctggcagacctggtacaaatggtttcccgggaggacct
ggccctaaaggagaagctggaactccaggtagccccggtggtcctggcagagatggccaa
cctggtgccccaagtagacaacctggaccagttggacctgccggacccgctggacaaccc
ggtgcccccggaggccctggcaaggacggattcccaggtggaccaggagccccaggtaaa
gatggacttccaggcggaccaggtttcccaggcggtcccggacaaccaggcaatccaggc
aaagatggtcttaacggaggccccggcgctcctggcttcccaggcggacccggaccagtt
ggacctcagggaaaacccggtgctccaggtttcaatggcggacctggaccagctggaccc
gttggaccgatcggtggccccggacctcaaggtaaaccaggtacagctggtttacccggt
ggaccaggacctcaaggaccacaaggaggccccggaccacaagggggtccaggtagtcca
ggtcaaaatggagcaccaggtggccctggacaacctggccctgttggtcaacccggtgca
gctggcagtgtagtcacagtcccagccccagctgaacagccttcttacccagcgccagtt
gaacaaccctcatacccagctccagctcagcaaccgtcttggcccgcaccagctccagct
cagtcgtcgtggtctgctccagctccagctcagtcgacatggtcggccccagctccagct
caatcttcatggtcagctcctgctcagcccgcattccagccgttgcaatccgcctacgga
cgataa
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