Daphnia pulicaria: 124343589
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Entry
124343589 CDS
T08670
Name
(RefSeq) replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
dpz
Daphnia pulicaria
Pathway
dpz03030
DNA replication
dpz03410
Base excision repair
dpz03420
Nucleotide excision repair
dpz03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124343589
03410 Base excision repair
124343589
03420 Nucleotide excision repair
124343589
03430 Mismatch repair
124343589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dpz03032
]
124343589
03400 DNA repair and recombination proteins [BR:
dpz03400
]
124343589
DNA replication proteins [BR:
dpz03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
124343589
DNA repair and recombination proteins [BR:
dpz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
124343589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA
BRCT
Rad17
AAA_22
AAA_30
PTCB-BRCT
AAA_5
RuvB_N
AAA_14
AAA_33
AAA_16
nSTAND3
RNA_helicase
AAA_18
Zeta_toxin
AAA_17
AAA_assoc_2
Motif
Other DBs
NCBI-GeneID:
124343589
NCBI-ProteinID:
XP_046652923
LinkDB
All DBs
Position
6:complement(1480431..1491316)
Genome browser
AA seq
1086 aa
AA seq
DB search
MPPKSPKTAAVKGDIRNFFTSIAPKSSKSPGSASNVKDEDAGKRKKKAMVLVDSTDSDSE
GPIMKPASLKKTKVEDIPKKETVVSASKLKKHAKTPETPLQPVDIGSVFGNKPIQRSKEI
PEKRKRTVIEDHSDEDFEATLQQLDEAPVTKKSKVVEKSTSKKGKPDSPTKKEKIKSPAK
EEKSKSSPPSKNEKTSSKESARVEVKRDSDKKRKAADSSVTPKKSTPTKDAKPSEEKDKR
IKSQLKELDSNSNKTSSTPKSNKKMKAETTIVKETPKKKSSKDDDDDDPDVIDSPAFDAL
EKRKEKAENYRKFLASRRDGGAKNPGSKPVPEGAPGCLTGLTIVVTGVLESLHREEAEGL
VKKYGGKAPKAVSKNTTYLLAGDDAGPSKLSKAKDLNVPMLSEDDFLKLIATRPAGQGLS
SPAAKKAPTTPRSAHKAAASKKAEPEPPSKPITVSSPPKKKSPEPKKIDLKPQQSSSSSS
TAAPIRKAEPISLKMEVAEGNDQAQLPWVDKYKPTSLKQVIGMHGDRSIAKKLVYWLKSW
YDNRGKKLAKPSPWSTNDDGAFFKAALLSGPPGIGKTTTAHLAAKELGYDLVEMNASDTR
SKRLLHEHVMELLSSQSLSSYAHGSAQIEGGRKRVLVMDEVDGMAGNEDRGGIQELIAMI
KTSKIPVVCICNDRQHPKIRSLSNYCYDLKFTKPRIEQIRGAMMSICFKEGLSLKPEALD
EIIMGANQDVRQVLHHLSMLASGKKSLSTESAKLEASKSKKDLKLGPWDVVKKVFSAEEH
KGMSIHDKTGLFFQDYSFGPLFVQENYPCVVPQAAKGNAIKTLDLLGRTAHCMSQTDLIE
KVIRSQNAWSLLPVEAVFASVVPGQLMEGFISSQIVFPSWLGKNSRTNKMDRLLQELQTH
MRLKISGSKRAVNLDYLPYVLNSIVGPLKRSGADGVSEAIRAMESYDLMREDLDSLLEVA
QWPHKPDIMAGIEGKVKAAFTRAYNKEAHMTPYAAGQVKKGRSKDTADDLEALDGDEDGL
AGEVDDEEQSEDPSLDAMIKVKKESKKTASSSGAAAAGAAGRKKTGAPAATRGRGGGRGG
RKKAAE
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgcctcccaaaagtcccaaaactgctgcagttaagggagacattcgaaattttttcacg
tcgatcgccccgaaatcgtcgaaatcaccgggttcagcatcgaatgtgaaagacgaggat
gcagggaaacgaaagaagaaagccatggttcttgttgactccacagattcagactcggaa
gggcctatcatgaaaccagcgtccttaaagaaaacaaaagtggaagacataccaaagaag
gagactgttgtttcagcctccaaactcaagaaacatgccaaaacacctgaaactccactt
caacctgttgacatcggctcagtattcggcaacaagcccatccagaggagcaaggaaata
ccagagaaaaggaaaagaacagtcattgaagatcacagtgatgaagattttgaagccaca
ctgcagcagctggatgaagccccagtgacgaaaaagtcaaaagtggttgaaaagtcaaca
agtaaaaagggcaaacccgattctccaaccaagaaagagaaaatcaaatctcctgccaag
gaagagaaatccaagtctagccctccatctaaaaatgagaaaacatcttcaaaagagtca
gcccgggtggaagtaaagagggattctgacaagaagagaaaggctgctgattcatccgtc
actcccaagaagagcactcccactaaggatgccaaacccagtgaagagaaagacaaaaga
atcaaatcccagctgaaagaattggactctaattcaaataaaacctcttcaacccccaag
tcaaacaaaaagatgaaggcggagacaacaattgtcaaagaaactcccaaaaagaagtcg
agcaaagatgatgacgacgacgacccagatgtaatcgactcgccggccttcgatgcctta
gaaaagcgaaaagaaaaggccgagaattaccggaaattccttgcttctcgcagagacggc
ggagcgaaaaatcccggcagtaaacccgttccggagggagctccgggatgtctgacggga
ttgaccattgtcgttacaggcgttttggaatccctgcaccgtgaagaggccgaagggctt
gtcaagaaatatggcggcaaagcgcctaaagctgtcagcaagaatacgacgtatctattg
gccggcgatgatgcgggtccctctaagctgtcgaaagccaaggatctcaatgtacccatg
ctcagtgaagatgatttcttgaaattgatcgccacaagacctgccggccaaggtttaagt
tctccggctgccaagaaagccccgacgacacctaggagcgcccataaagccgccgcgtcc
aagaaagccgagccagagcctcctagcaagcccattactgtttctagtccgcccaagaag
aaatcccccgaacccaagaaaatcgatctcaaaccgcagcagagtagcagcagcagcagc
acggccgctcctatcaggaaagccgagcccatttcgttaaaaatggaagtcgccgaagga
aacgaccaagcccaactaccctgggtcgacaagtacaaaccgaccagcttaaaacaagtg
attggaatgcacggagatcggagcatcgctaaaaagttggtctactggctgaaaagttgg
tacgataatcgcggcaagaaacttgcaaagcccagtccctggtcgaccaacgacgacgga
gccttcttcaaagccgctttgctctccggcccacctggcattggaaaaaccacgacggcc
catctggcggccaaggagctgggctacgacctggtggagatgaacgcttcggataccagg
agcaagcggctgctgcacgagcacgtgatggagctcttgtcgtcgcaatcgctgtcgtcg
tacgctcacggttcggctcagattgaaggcggccgcaagcgggtgctcgtcatggacgaa
gtggacggcatggcgggtaacgaggaccgcggcgggatccaggagctgattgccatgatc
aaaacgtcgaaaatcccggtcgtttgcatctgcaacgaccggcagcacccgaaaatcagg
agcctctccaattattgctacgatttaaagttcaccaagccgagaatcgagcagatccgc
ggggccatgatgagcatctgcttcaaagagggactcagcttgaaaccggaagctctcgac
gagatcatcatgggagccaatcaggacgtccgccaggttcttcaccacttgtcgatgctg
gcctcgggcaagaagagcctgtcgaccgagagcgccaaactggaggcgtccaagagcaag
aaggatctcaaactgggaccgtgggacgtcgtcaagaaggtcttctccgccgaggagcac
aaaggaatgagcatccacgacaagacgggcctctttttccaggattacagcttcggtccc
ttgttcgtccaggagaattatccgtgcgtcgtgcctcaggcggccaaaggcaacgccatc
aagacgctggacttgctgggccgcaccgcccactgcatgtctcagacggacctgatcgag
aaagtcatccgctcacagaacgcttggagtctgctaccggtggaggccgttttcgccagc
gtggtgcccggccagctgatggagggtttcatcagctcacaaatcgtgtttcccagttgg
ctgggcaagaattcgcgcaccaacaagatggaccgtctcctgcaggagctgcagacgcac
atgcgtctcaagatctctggatcgaagcgggccgtcaatctcgactaccttccctacgtc
ctcaattcgatcgtcggacctttgaagcggtcaggagccgacggggtcagcgaggctatc
cgggcgatggagagctacgatctgatgagggaggatctcgactcgctcctcgaggtggct
caatggccacataaaccagacatcatggccggaatcgaaggcaaagtcaaggcggccttc
acccgggcttacaacaaagaagctcacatgacaccgtacgctgccggccaagtgaagaag
ggccgatcgaaagacacggccgacgatttggaagccctggatggagatgaggatggattg
gctggtgaggtggacgatgaggagcagagcgaagatccatcgctggatgccatgatcaaa
gtcaagaaggaatcgaagaagacggccagcagctcaggagcagcggcagcaggagcggcg
ggcaggaaaaaaacaggagccccagctgccaccagaggtcgaggcggtggccgtggaggt
cgcaagaaagccgctgaataa
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integrated database retrieval system
