Daphnia pulicaria: 124343596
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Entry
124343596 CDS
T08670
Name
(RefSeq) methionine--tRNA ligase, cytoplasmic-like
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
dpz
Daphnia pulicaria
Pathway
dpz00450
Selenocompound metabolism
dpz00970
Aminoacyl-tRNA biosynthesis
dpz01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
124343596
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
124343596
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dpz01007
]
124343596
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dpz03016
]
124343596
Enzymes [BR:
dpz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
124343596
Amino acid related enzymes [BR:
dpz01007
]
Aminoacyl-tRNA synthetase
Class I (U)
124343596
Transfer RNA biogenesis [BR:
dpz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
124343596
Prokaryotic type
Other AARSs
124343596
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
WHEP-TRS
Anticodon_3
tRNA-synt_1
GST_C_3
GST_C
GST_N_5
Arc1p_N_like
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
124343596
NCBI-ProteinID:
XP_046652934
LinkDB
All DBs
Position
6:complement(1433800..1438882)
Genome browser
AA seq
936 aa
AA seq
DB search
MKLITRSNDLSGLKVLLAAEYLNISIELEISPSAEKPVLIINEDCRLFSSNSAVWYLFCF
NGHKKVNPSQDKWMDWESTILQPEVQALTNKQPHQLVTVLEHLDKSTRNKFLIGNSLSAA
DVIVFSSLLELSNGKLMDSYSTLLKWFNQIYTSDQFKATALKMNFKIKETPTEQAEEEEA
AISAEEIEEAVKYWAQSNIPKPKTIIHPVLPVEGERNILITSALPYVNNFPHLGNIIGCV
LSADVFARYCRLRNYNTLYICGTDEYGTATETKALEEGLTPQQICDKYFKLHDEVYKWFD
ISFDHFGRTTTPNQTKIAQDIFLKLHRNNYLVEDTMEQLLCEHCKIFLADRFVEGTCPLC
GYEDARGDQCDKCGKLVNAVELKLPRCKMCRHTPVIKTSKHLFLNLPKIEDKLTSWMESV
TAGWTHNARVIANSWIKEGLKPRCITRDLKWGTPVPLEGYTDKVFYVWFDAPIGYLSITA
CYTEEWERWWKNREQVVHYEFMAKDNVPFHSVVFPSSQLGTHDPYTLVNHLIATEYLNYE
DGKFSKSRGVGVFGNNAQETGIPADVWRFYLLYVRPESQDSTFSWADLMTKNNTELLNNL
GNFANRALSFLEKNYDSCVPSMTLGQEENMLLVRINRELKQYISLLENAKLRDAIRPIFS
ISRLGNQLMQAAQPWVLIKSTKDEEKKRAGTVIGLCANIICQLSVMLLPYMPNLSGKLQE
QLGVTSDVNHLIPEFTCRLPAGHRIGKPAPLFQKIEQSLIDELKQKFSGAQVGSAAPPPG
NPAATPVAKEAASDSLETPENLALLVAQQGDKVRQLKAAKAEKSIVTAAVAELLDLKKRL
ATAEEAAKQIHQAPPPAATEKPTPSSSDLENLTKQVAEQGDKVRGLKTAKADKASIDVAV
AVLLDLKKQLALAEGKDPAAPANPAASKGKKKGQQK
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgattacacgttccaacgatctttccggattgaaggttttgctggcagcagaa
tatctcaatatctcgatcgaattagaaatctcgccatcggctgagaaaccggtccttatc
atcaacgaagactgtcgacttttctcgtcaaactcggctgtatggtatctattctgtttt
aatggccacaagaaagttaatccatcacaagacaaatggatggattgggaaagtacgatc
ctacaacctgaagtgcaggcattgaccaacaagcagcctcatcaactcgtcactgtgttg
gaacatcttgacaaatccactcgcaacaagtttcttattggaaattctttgtctgcagct
gacgtgatagtgtttagttccctactagaactctcaaacggaaagcttatggatagctac
tcgacactactgaagtggttcaaccaaatatacacaagtgatcagtttaaggcaacagct
ttaaaaatgaatttcaagataaaggagacgcccactgaacaggcagaagaggaagaagca
gccatcagcgcagaggaaatagaagaggcagtaaagtactgggcacaaagtaacatccct
aagccaaaaaccatcatccatccagtgttacctgttgaaggagaacgtaatattctgatt
acgagcgccttaccttacgtcaacaatttcccccatttgggcaatattattggttgtgtg
ctatcagctgatgtatttgctcgctactgccgattgcgaaactacaacacgttgtatatt
tgcggaacagacgagtatggaacagctaccgaaactaaagcattggaagaaggtctaact
ccgcagcaaatttgcgataaatattttaaacttcacgatgaggtttacaaatggttcgat
atcagcttcgaccatttcggacgtactactacccccaatcaaaccaagattgctcaagac
attttcttgaaattacatcgcaacaattacttggtggaggatactatggaacagctgttg
tgcgagcattgcaagatattcttggctgatcggttcgtggaaggcacttgtcccttgtgt
ggttacgaagatgccagaggtgatcagtgtgacaaatgcggcaagctggtcaatgccgtt
gaactcaagttaccaagatgtaaaatgtgccgtcatactcccgtgattaagacatctaag
caccttttcctcaatttaccaaagattgaggataagttgacaagctggatggaaagtgtg
acagctggatggactcataacgcccgcgtcattgcaaattcctggattaaggaaggcctg
aagccacgttgcataactcgtgacttgaaatggggcactcctgtccctcttgaaggatac
actgacaaggtcttctacgtgtggtttgatgcccccattgggtacttgagcatcacggct
tgctacacggaagaatgggaacgctggtggaaaaatcgcgagcaggtcgtccattacgaa
ttcatggccaaggacaatgttcccttccattccgttgtcttcccttcatctcaactgggc
acacacgacccgtacacgctggtcaatcatctgattgccactgaatatctcaattacgag
gatggcaagttctccaagagtcgtggtgtcggggtttttggtaacaatgcccaggaaacg
ggcattccagctgatgtctggcgcttttatctgctttacgtccgtccggaatcgcaagac
tcgactttttcatgggctgatttgatgactaagaacaacactgaactactcaacaacctt
ggcaatttcgccaaccgagccctgagtttcctggagaagaactacgacagttgtgtacct
tccatgacactgggtcaagaagaaaacatgttgctagttcgaatcaaccgcgaactgaag
caatacatttctctactggagaatgcaaagttacgcgatgccatcagacccatctttagc
atctcacgtttaggcaatcaattgatgcaagctgcccagccctgggtgttgattaagagt
accaaagatgaagagaaaaagagggccggaacagtcatcggtctatgcgccaacattatt
tgtcagttgtcggtcatgttactcccgtacatgccaaacctatctggaaaacttcaggaa
caattgggtgtcacatcagacgtcaaccatttgataccggaattcacttgtcgtctgcct
gccggccaccggatcggcaagcctgcccccctattccagaagattgaacagtcacttata
gacgaattgaagcaaaagttttctggcgcccaagttggatccgctgctcctcctccaggg
aatccagcagctactccagtggcaaaagaagcagcttcagacagccttgaaacaccagaa
aatctggcactgttagtggcccagcagggtgacaaagtgcgccagttgaaagctgccaag
gccgagaaatccattgttacagctgccgtagctgaacttttagatttgaagaaaaggctg
gctactgcggaggaagcagccaaacaaatccatcaagcgccaccacctgcagcaaccgag
aagcctacgccgtcatccagcgaccttgaaaatctgaccaaacaagttgccgaacagggt
gacaaagttcgtgggttgaaaactgccaaagcagacaaggcttccatcgatgtggccgta
gctgttctcctggatttgaagaaacaattggctctggccgaaggaaaagaccccgctgct
ccggccaatccagccgccagtaaagggaagaaaaaggggcaacaaaaatga
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