Daphnia pulicaria: 124343606
Help
Entry
124343606 CDS
T08670
Name
(RefSeq) polyribonucleotide nucleotidyltransferase 1, mitochondrial-like
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
dpz
Daphnia pulicaria
Pathway
dpz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dpz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
124343606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dpz03019
]
124343606
03016 Transfer RNA biogenesis [BR:
dpz03016
]
124343606
Enzymes [BR:
dpz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
124343606
Messenger RNA biogenesis [BR:
dpz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
124343606
Transfer RNA biogenesis [BR:
dpz03016
]
Prokaryotic type
tRNA degradation factors
124343606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
124343606
NCBI-ProteinID:
XP_046652953
LinkDB
All DBs
Position
6:1620083..1623070
Genome browser
AA seq
767 aa
AA seq
DB search
MAVHVSRSRLYSQNLFVNQYSGVRFGRICANYIKRCESTVSVPLSSGKKLVFQSGKYARF
ADGSAVASFGDTAVLVTAVSKAKSSPASFLPLTVDYRQKAAAAGRIPTNFLRRELGTSER
EILTSRMIDRSLRPLFPDGYFYETQIVCNLLSVDGVNDPEVLSINAASAALAISDIPWNG
PVAAVRVGLIDNEVVINPTRRELAHSQLNLVVSSTFPNLVVMLEASAENVYQQDFLKAIR
TGVKECQTIAKAIEKLRKDAGKPKREFIVLPSGSEELLSAVKLLSENRLRVILRDFNHDK
ISRDVAVATVRNDVMEKLRTSFPDTDPMIISESFNKFFKEFFRQLILDEEIRCDGRKLTD
IRNISCGVDLYRPLHGSAIFQRGQTQVVCTVAFDSPESALKSDPVSILMGGLKAKNFFLH
YEFPPYATNETGRVGSGGSAGRRELGHGALAEKGLRPVVPSDYPFTIRLTSEVLESNGSS
SMASVCGGSLALMDAGVPILQPAAGVAVGLVSRVNPETKQIDDYRILTDLLGIEDYLGDM
DFKLAGTKKGITALQADFKLPGVPLKIIMESVVQASDAKSHILDIMAQTIKQPRNDKKDI
WPLSEKLEIEAHKRPKFVGIGGSNLKKLTAETGVQITSIDDLTFSIFAPNQSAMDEAKEM
IEQFLKEEKEPELEFGAIYKARIVEMKETGVLVTFYPKMVPTLLHNSQLDVRKVAHPSAL
GLQVGDEISIKYFGRDPVSGRMRLSRKVLQSVASSVVKNLNGKPPSS
NT seq
2304 nt
NT seq
+upstream
nt +downstream
nt
atggctgtccacgtgagtaggagccggctctattcacaaaatctttttgtaaatcaatat
tccggcgttcgtttcggtagaatatgtgccaattacatcaaaagatgtgaatccactgtc
agtgtacctttatcttcagggaaaaaactggtatttcaatcggggaaatatgctcgattc
gccgatggaagcgccgtggcatcctttggagatactgccgtattggttacggctgtgagt
aaagccaaaagctcaccagcttcattcctgcctcttaccgttgactacagacagaaagcc
gctgcagcaggcagaatacccaccaatttcttgaggagagaacttgggacatccgaaaga
gagattctgactagtcgcatgattgaccggtcccttagaccactcttcccagatggttac
ttctatgaaactcagattgtatgcaacttgctatctgtcgatggagtcaacgatccggaa
gtgctgagtatcaatgctgcctctgctgcacttgccatttcagacattccttggaacggt
cctgtggcagcagttcgtgtgggtctcattgacaatgaagtggttatcaatcccacaaga
agagagttggcccacagtcagttaaacttggtcgtcagttccactttcccaaatttggtc
gtcatgctggaagcttcagccgaaaatgtgtaccagcaagactttttgaaagccatcaga
acgggagtgaaagaatgtcaaactatcgccaaggcaatcgaaaaattgcggaaagatgcc
gggaaacccaaaagggagtttatcgtcttgccgtctggctcggaagagttgctatctgcc
gttaaactattgagcgaaaatcgattgcgggtcattctgcgcgattttaatcacgacaag
atttcgcgtgacgttgcagttgccaccgtacgaaacgatgtcatggaaaaactaagaacc
agctttcccgatacggatccaatgattatcagcgaatcatttaataaatttttcaaggaa
ttctttcgacagcttattctagatgaagaaatcaggtgtgacgggaggaagttgacggac
attcggaacatttcttgtggtgttgacttgtatcgaccgctgcacggatccgccatcttc
caacgtggtcaaactcaagttgtttgcactgtagccttcgattcaccggaatcagccttg
aaatccgatccagtttccattcttatgggtggattgaaagccaagaatttcttcctccat
tacgaattcccgccttatgcaaccaacgaaacggggagggtagggtcaggtggtagcgcc
ggtcgtcgtgagcttggccacggcgctttagctgagaaaggtctcagacctgtggtgccc
agcgactatccgtttaccatccgtttgacttctgaagtcttagagtccaatggttcttcg
tcaatggcctcggtttgtggaggttctctggctctgatggacgctggagttccaattttg
cagccggcagcgggagtggcggttggtttggtcagccgagtaaacccggaaactaaacag
attgacgactatcgcattctcaccgatcttctgggcattgaagactatttgggagacatg
gatttcaaattagccggaaccaaaaaaggcataaccgctctccaagcagatttcaaacta
cctggtgtacctttaaagataatcatggagtcggtggttcaagctagcgatgccaagtcg
cacatactcgacataatggctcagacaatcaaacagccgcgtaatgacaagaaagatatc
tggccactctccgaaaaactggaaattgaagctcacaaacgacccaaatttgtcggtatc
ggtggttcgaaccttaagaaattaactgctgaaacaggagttcagattacctctatcgat
gacttgacgttttccatcttcgcacccaatcaatcagcgatggacgaagccaaggaaatg
atcgaacaatttctgaaggaagaaaaagagccggaactggaatttggcgccatctacaaa
gcgcgtatcgtcgagatgaaggaaactggtgtgttggtgaccttctaccccaaaatggtt
cctacactccttcacaattcacaactggacgtacggaaagtagcccacccatctgccctg
ggacttcaggtaggagatgaaatctctattaaatatttcggccgggatccagttagcggc
aggatgcggttgtcgcgtaaagtccttcagtcggttgcgtcctcagttgtgaaaaacctg
aatggaaaacccccaagtagttaa
DBGET
integrated database retrieval system
